RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 HIRIP3Q9BW71 556 aaPredicted RBP13.88□□□□□ -0.19
CDH8-211ENST00000584337 DHX57Q6P158 1386 aaKnown RBP13.86□□□□□ -0.19
CDH8-211ENST00000584337 GSE1Q14687 1217 aa13.85□□□□□ -0.19
CDH8-211ENST00000584337 NAP1L5Q96NT1 182 aaPredicted RBP13.84□□□□□ -0.19
CDH8-211ENST00000584337 ZMYND15Q9H091 742 aa13.82□□□□□ -0.2
CDH8-211ENST00000584337 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
CDH8-211ENST00000584337 HSP90AA2PQ14568 343 aaPredicted RBP13.81□□□□□ -0.2
CDH8-211ENST00000584337 DDRGK1Q96HY6 314 aa13.81□□□□□ -0.2
CDH8-211ENST00000584337 C11orf95C9JLR9 678 aaPredicted RBP13.81□□□□□ -0.2
CDH8-211ENST00000584337 FAM9BQ8IZU0 186 aa13.81□□□□□ -0.2
CDH8-211ENST00000584337 HSP90AA1P07900 732 aaKnown RBP13.8□□□□□ -0.2
CDH8-211ENST00000584337 RB1CC1Q8TDY2 1594 aa13.78□□□□□ -0.2
CDH8-211ENST00000584337 CNGB1Q14028 1251 aaPredicted RBP13.78□□□□□ -0.2
CDH8-211ENST00000584337 EEA1Q15075 1411 aa13.76□□□□□ -0.21
CDH8-211ENST00000584337 FAM43AQ8N2R8 423 aa13.75□□□□□ -0.21
CDH8-211ENST00000584337 WASHC2AQ641Q2 1341 aa13.74□□□□□ -0.21
CDH8-211ENST00000584337 CLIP1P30622 1438 aa13.74□□□□□ -0.21
CDH8-211ENST00000584337 PPP1R15AO75807 674 aaPredicted RBP13.72□□□□□ -0.21
CDH8-211ENST00000584337 GOLGA3Q08378 1498 aa13.72□□□□□ -0.21
CDH8-211ENST00000584337 A0A0U1RQG5 324 aaPredicted RBP13.72□□□□□ -0.21
CDH8-211ENST00000584337 MRS2Q9HD23 443 aa13.71□□□□□ -0.21
CDH8-211ENST00000584337 PNNQ9H307 717 aaKnown RBP13.71□□□□□ -0.21
CDH8-211ENST00000584337 WASHC2CQ9Y4E1 1318 aa13.69□□□□□ -0.22
CDH8-211ENST00000584337 FRAT1Q92837 279 aaPredicted RBP13.68□□□□□ -0.22
CDH8-211ENST00000584337 SIN3AQ96ST3 1273 aa13.67□□□□□ -0.22
CDH8-211ENST00000584337 POLR3GLQ9BT43 218 aa13.67□□□□□ -0.22
CDH8-211ENST00000584337 TCERG1O14776 1098 aaKnown RBP13.66□□□□□ -0.22
CDH8-211ENST00000584337 TONSLQ96HA7 1378 aa13.65□□□□□ -0.22
CDH8-211ENST00000584337 RRP9O43818 475 aaKnown RBP13.64□□□□□ -0.23
CDH8-211ENST00000584337 ARXQ96QS3 562 aa13.64□□□□□ -0.23
CDH8-211ENST00000584337 NFKBIBQ15653 356 aa13.64□□□□□ -0.23
CDH8-211ENST00000584337 VPS8Q8N3P4 1428 aa13.63□□□□□ -0.23
CDH8-211ENST00000584337 L1TD1Q5T7N2 865 aaKnown RBP13.63□□□□□ -0.23
CDH8-211ENST00000584337 FAM50AQ14320 339 aaKnown RBP13.62□□□□□ -0.23
CDH8-211ENST00000584337 SOGA1O94964 1423 aa13.61□□□□□ -0.23
CDH8-211ENST00000584337 PDE4AP27815 886 aa13.61□□□□□ -0.23
CDH8-211ENST00000584337 P3H3Q8IVL6 736 aa13.56□□□□□ -0.24
CDH8-211ENST00000584337 ZBED9Q6R2W3 1325 aa13.55□□□□□ -0.24
CDH8-211ENST00000584337 ARID4BQ4LE39 1312 aaPredicted RBP13.55□□□□□ -0.24
CDH8-211ENST00000584337 CCDC88BA6NC98 1476 aa13.54□□□□□ -0.24
CDH8-211ENST00000584337 ARID3CA6NKF2 412 aa13.53□□□□□ -0.24
CDH8-211ENST00000584337 UNC13AQ9UPW8 1703 aa13.53□□□□□ -0.24
CDH8-211ENST00000584337 CCNB3Q8WWL7 1395 aa13.52□□□□□ -0.24
CDH8-211ENST00000584337 RAB3GAP2Q9H2M9 1393 aa13.52□□□□□ -0.25
CDH8-211ENST00000584337 CEP164Q9UPV0 1460 aa13.51□□□□□ -0.25
CDH8-211ENST00000584337 SLC4A3P48751 1232 aa13.51□□□□□ -0.25
CDH8-211ENST00000584337 MS4A1P11836 297 aa13.51□□□□□ -0.25
CDH8-211ENST00000584337 NUDCQ9Y266 331 aa13.51□□□□□ -0.25
CDH8-211ENST00000584337 TRIM44Q96DX7 344 aaPredicted RBP13.51□□□□□ -0.25
CDH8-211ENST00000584337 BAZ1BQ9UIG0 1483 aaKnown RBP13.49□□□□□ -0.25
CDH8-211ENST00000584337 PDE4CQ08493 712 aa13.49□□□□□ -0.25
CDH8-211ENST00000584337 SCRIBQ14160 1630 aa13.49□□□□□ -0.25
CDH8-211ENST00000584337 ABCC8Q09428 1581 aa13.48□□□□□ -0.25
CDH8-211ENST00000584337 RBM10P98175 930 aaKnown RBP13.47□□□□□ -0.25
CDH8-211ENST00000584337 EIF4G2P78344 907 aaKnown RBP eCLIP13.47□□□□□ -0.25
CDH8-211ENST00000584337 BACH2Q9BYV9 841 aa13.47□□□□□ -0.25
CDH8-211ENST00000584337 KANK4Q5T7N3 995 aaPredicted RBP13.46□□□□□ -0.25
CDH8-211ENST00000584337 FRAT2O75474 233 aaPredicted RBP13.45□□□□□ -0.26
CDH8-211ENST00000584337 NCLP19338 710 aaKnown RBP13.45□□□□□ -0.26
CDH8-211ENST00000584337 TNNT2P45379 298 aaPredicted RBP13.45□□□□□ -0.26
CDH8-211ENST00000584337 BECN1Q14457 450 aa13.44□□□□□ -0.26
CDH8-211ENST00000584337 SETD5Q9C0A6 1442 aa13.44□□□□□ -0.26
CDH8-211ENST00000584337 NACADO15069 1562 aa13.43□□□□□ -0.26
CDH8-211ENST00000584337 SENP3-EIF4A1A0A087X0R7 540 aa13.43□□□□□ -0.26
CDH8-211ENST00000584337 GOLGA6L3A6NEY3 463 aa13.43□□□□□ -0.26
CDH8-211ENST00000584337 FBLN2P98095 1184 aa13.43□□□□□ -0.26
CDH8-211ENST00000584337 TMC1Q8TDI8 760 aa13.41□□□□□ -0.26
CDH8-211ENST00000584337 ANP32BQ92688 251 aaKnown RBP13.41□□□□□ -0.26
CDH8-211ENST00000584337 WDR97A6NE52 1622 aa13.4□□□□□ -0.26
CDH8-211ENST00000584337 PRKRIP1Q9H875 184 aaPredicted RBP13.39□□□□□ -0.27
CDH8-211ENST00000584337 RRAGDQ9NQL2 400 aaPredicted RBP13.38□□□□□ -0.27
CDH8-211ENST00000584337 EXOC6Q8TAG9 804 aa13.38□□□□□ -0.27
CDH8-211ENST00000584337 AKNAQ7Z591 1439 aa13.37□□□□□ -0.27
CDH8-211ENST00000584337 RUSC2Q8N2Y8 1516 aa13.37□□□□□ -0.27
CDH8-211ENST00000584337 TPM2P07951 284 aa13.37□□□□□ -0.27
CDH8-211ENST00000584337 HSPA5P11021 654 aaKnown RBP13.37□□□□□ -0.27
CDH8-211ENST00000584337 PDCL3Q9H2J4 239 aa13.37□□□□□ -0.27
CDH8-211ENST00000584337 DCAF11Q8TEB1 546 aa13.36□□□□□ -0.27
CDH8-211ENST00000584337 MYH16Q9H6N6 1097 aa13.36□□□□□ -0.27
CDH8-211ENST00000584337 UPF2Q9HAU5 1272 aaKnown RBP13.34□□□□□ -0.27
CDH8-211ENST00000584337 CCDC184Q52MB2 194 aa13.34□□□□□ -0.27
CDH8-211ENST00000584337 CLCN1P35523 988 aa13.34□□□□□ -0.27
CDH8-211ENST00000584337 GZF1Q9H116 711 aaPredicted RBP13.34□□□□□ -0.27
CDH8-211ENST00000584337 FGD1P98174 961 aa13.33□□□□□ -0.27
CDH8-211ENST00000584337 RCAN3Q9UKA8 241 aa13.33□□□□□ -0.28
CDH8-211ENST00000584337 SMG6Q86US8 1419 aaKnown RBP13.33□□□□□ -0.28
CDH8-211ENST00000584337 AAMPQ13685 434 aa13.32□□□□□ -0.28
CDH8-211ENST00000584337 SLKQ9H2G2 1235 aaPredicted RBP13.32□□□□□ -0.28
CDH8-211ENST00000584337 RRP1P56182 461 aaKnown RBP13.32□□□□□ -0.28
CDH8-211ENST00000584337 ZNF326Q5BKZ1 582 aaKnown RBP13.32□□□□□ -0.28
CDH8-211ENST00000584337 POGKQ9P215 609 aa13.31□□□□□ -0.28
CDH8-211ENST00000584337 RGS3P49796 1198 aa13.3□□□□□ -0.28
CDH8-211ENST00000584337 MAP7D2Q96T17 732 aa13.3□□□□□ -0.28
CDH8-211ENST00000584337 RRBP1Q9P2E9 1410 aaKnown RBP13.3□□□□□ -0.28
CDH8-211ENST00000584337 CALD1Q05682 793 aaKnown RBP13.3□□□□□ -0.28
CDH8-211ENST00000584337 FAM161AQ3B820 660 aa13.29□□□□□ -0.28
CDH8-211ENST00000584337 CECR2Q9BXF3 1484 aa13.29□□□□□ -0.28
CDH8-211ENST00000584337 ARID3AQ99856 593 aa13.28□□□□□ -0.28
CDH8-211ENST00000584337 PDIA4P13667 645 aaKnown RBP13.28□□□□□ -0.28
CDH8-211ENST00000584337 MSNP26038 577 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms