RNA–Protein interactions for RNA: ENST00000584322.1

BRIP1-206, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 3

Gene BRIP1, Length 716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-206ENST00000584322 SPDYE6P0CI01 402 aa17.36■□□□□ 0.37
BRIP1-206ENST00000584322 SPDYE2Q495Y8 402 aa17.36■□□□□ 0.37
BRIP1-206ENST00000584322 ERCC6Q03468 1493 aa17.34■□□□□ 0.37
BRIP1-206ENST00000584322 IFNLR1Q8IU57 520 aaPredicted RBP17.34■□□□□ 0.37
BRIP1-206ENST00000584322 ABCC8Q09428 1581 aa17.32■□□□□ 0.36
BRIP1-206ENST00000584322 OSCARQ8IYS5 282 aa17.31■□□□□ 0.36
BRIP1-206ENST00000584322 THOC2Q8NI27 1593 aaKnown RBP17.28■□□□□ 0.36
BRIP1-206ENST00000584322 MRC2Q9UBG0 1479 aa17.28■□□□□ 0.36
BRIP1-206ENST00000584322 WDR62O43379 1518 aa17.26■□□□□ 0.35
BRIP1-206ENST00000584322 SSUH2Q9Y2M2 353 aa17.25■□□□□ 0.35
BRIP1-206ENST00000584322 CACNB1Q02641 598 aaPredicted RBP17.24■□□□□ 0.35
BRIP1-206ENST00000584322 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
BRIP1-206ENST00000584322 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
BRIP1-206ENST00000584322 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
BRIP1-206ENST00000584322 URB2Q14146 1524 aaKnown RBP17.18■□□□□ 0.34
BRIP1-206ENST00000584322 WRNQ14191 1432 aaPredicted RBP eCLIP17.18■□□□□ 0.34
BRIP1-206ENST00000584322 CUX2O14529 1486 aa17.18■□□□□ 0.34
BRIP1-206ENST00000584322 TOPBP1Q92547 1522 aa17.17■□□□□ 0.34
BRIP1-206ENST00000584322 TOP2BQ02880 1626 aa17.17■□□□□ 0.34
BRIP1-206ENST00000584322 CUX1P39880 1505 aa17.14■□□□□ 0.33
BRIP1-206ENST00000584322 KLHL34Q8N239 644 aa17.12■□□□□ 0.33
BRIP1-206ENST00000584322 SYNJ1O43426 1573 aa17.08■□□□□ 0.32
BRIP1-206ENST00000584322 PLCD3Q8N3E9 789 aa17.06■□□□□ 0.32
BRIP1-206ENST00000584322 SPOCK2Q92563 424 aa17.06■□□□□ 0.32
BRIP1-206ENST00000584322 WDR97A6NE52 1622 aa17.06■□□□□ 0.32
BRIP1-206ENST00000584322 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
BRIP1-206ENST00000584322 FGD5Q6ZNL6 1462 aa17.03■□□□□ 0.32
BRIP1-206ENST00000584322 IFT140Q96RY7 1462 aa17.02■□□□□ 0.32
BRIP1-206ENST00000584322 PKD2Q13563 968 aa17.01■□□□□ 0.31
BRIP1-206ENST00000584322 MIER1Q8N108 512 aa17.01■□□□□ 0.31
BRIP1-206ENST00000584322 TARBP1Q13395 1621 aaKnown RBP16.99■□□□□ 0.31
BRIP1-206ENST00000584322 ABCA10Q8WWZ4 1543 aa16.96■□□□□ 0.31
BRIP1-206ENST00000584322 SOGA1O94964 1423 aa16.95■□□□□ 0.3
BRIP1-206ENST00000584322 PLEKHG5O94827 1062 aa16.92■□□□□ 0.3
BRIP1-206ENST00000584322 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
BRIP1-206ENST00000584322 ZBTB47Q9UFB7 747 aaPredicted RBP16.87■□□□□ 0.29
BRIP1-206ENST00000584322 ABCA5Q8WWZ7 1642 aa16.87■□□□□ 0.29
BRIP1-206ENST00000584322 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
BRIP1-206ENST00000584322 PLCB2Q00722 1185 aa16.85■□□□□ 0.29
BRIP1-206ENST00000584322 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
BRIP1-206ENST00000584322 EIF4G3O43432 1585 aaKnown RBP16.84■□□□□ 0.29
BRIP1-206ENST00000584322 EEA1Q15075 1411 aa16.82■□□□□ 0.28
BRIP1-206ENST00000584322 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
BRIP1-206ENST00000584322 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
BRIP1-206ENST00000584322 GAPVD1Q14C86 1478 aa16.8■□□□□ 0.28
BRIP1-206ENST00000584322 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
BRIP1-206ENST00000584322 ZNF608Q9ULD9 1512 aaPredicted RBP16.78■□□□□ 0.28
BRIP1-206ENST00000584322 GRIN2BQ13224 1484 aa16.77■□□□□ 0.28
BRIP1-206ENST00000584322 RBM42Q9BTD8 480 aaKnown RBP16.76■□□□□ 0.27
BRIP1-206ENST00000584322 MAGI1Q96QZ7 1491 aaPredicted RBP16.74■□□□□ 0.27
BRIP1-206ENST00000584322 TDRD9Q8NDG6 1382 aaKnown RBP16.74■□□□□ 0.27
BRIP1-206ENST00000584322 CUL7Q14999 1698 aa16.73■□□□□ 0.27
BRIP1-206ENST00000584322 AQRO60306 1485 aaKnown RBP eCLIP16.73■□□□□ 0.27
BRIP1-206ENST00000584322 AKT1S1Q96B36 256 aa16.7■□□□□ 0.26
BRIP1-206ENST00000584322 SPDYE1Q8NFV5 336 aaPredicted RBP16.68■□□□□ 0.26
BRIP1-206ENST00000584322 CIZ1Q9ULV3 898 aaPredicted RBP16.67■□□□□ 0.26
BRIP1-206ENST00000584322 ADAMTS12P58397 1594 aa16.66■□□□□ 0.26
BRIP1-206ENST00000584322 IGF1RP08069 1367 aa16.65■□□□□ 0.26
BRIP1-206ENST00000584322 FHAD1B1AJZ9 1412 aa16.64■□□□□ 0.25
BRIP1-206ENST00000584322 SYNJ2O15056 1496 aa16.63■□□□□ 0.25
BRIP1-206ENST00000584322 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
BRIP1-206ENST00000584322 HAP1P54257 671 aaPredicted RBP16.62■□□□□ 0.25
BRIP1-206ENST00000584322 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.61■□□□□ 0.25
BRIP1-206ENST00000584322 RUSC2Q8N2Y8 1516 aa16.6■□□□□ 0.25
BRIP1-206ENST00000584322 BBXQ8WY36 941 aaPredicted RBP16.6■□□□□ 0.25
BRIP1-206ENST00000584322 PRXQ9BXM0 1461 aa16.6■□□□□ 0.25
BRIP1-206ENST00000584322 RGL2O15211 777 aa16.59■□□□□ 0.25
BRIP1-206ENST00000584322 KIF21BO75037 1637 aa16.58■□□□□ 0.24
BRIP1-206ENST00000584322 CARMIL1Q5VZK9 1371 aa16.57■□□□□ 0.24
BRIP1-206ENST00000584322 RAPGEF2Q9Y4G8 1499 aa16.55■□□□□ 0.24
BRIP1-206ENST00000584322 CLEC11AQ9Y240 323 aa16.55■□□□□ 0.24
BRIP1-206ENST00000584322 CHD1O14646 1710 aa16.55■□□□□ 0.24
BRIP1-206ENST00000584322 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
BRIP1-206ENST00000584322 PRR29P0C7W0 189 aa16.52■□□□□ 0.24
BRIP1-206ENST00000584322 GSE1Q14687 1217 aa16.52■□□□□ 0.24
BRIP1-206ENST00000584322 NPM1P06748 294 aaKnown RBP eCLIP16.51■□□□□ 0.23
BRIP1-206ENST00000584322 REM2Q8IYK8 340 aaPredicted RBP16.51■□□□□ 0.23
BRIP1-206ENST00000584322 NUP160Q12769 1436 aa16.49■□□□□ 0.23
BRIP1-206ENST00000584322 CHMP7Q8WUX9 453 aaPredicted RBP16.49■□□□□ 0.23
BRIP1-206ENST00000584322 NUBP1P53384 320 aa16.45■□□□□ 0.22
BRIP1-206ENST00000584322 GOLGA3Q08378 1498 aa16.45■□□□□ 0.22
BRIP1-206ENST00000584322 CTTNBP2Q8WZ74 1663 aa16.44■□□□□ 0.22
BRIP1-206ENST00000584322 PAXIP1Q6ZW49 1069 aaPredicted RBP16.43■□□□□ 0.22
BRIP1-206ENST00000584322 VSIG10Q8N0Z9 540 aa16.42■□□□□ 0.22
BRIP1-206ENST00000584322 CREBZFQ9NS37 354 aa16.42■□□□□ 0.22
BRIP1-206ENST00000584322 CEP170Q5SW79 1584 aa16.42■□□□□ 0.22
BRIP1-206ENST00000584322 CLASP1Q7Z460 1538 aa16.41■□□□□ 0.22
BRIP1-206ENST00000584322 KIAA0586Q9BVV6 1533 aa16.41■□□□□ 0.22
BRIP1-206ENST00000584322 DCAF8Q5TAQ9 597 aa16.4■□□□□ 0.22
BRIP1-206ENST00000584322 CHGAP10645 457 aaKnown RBP16.39■□□□□ 0.21
BRIP1-206ENST00000584322 CFAP44Q96MT7 982 aa16.39■□□□□ 0.21
BRIP1-206ENST00000584322 FAM9AQ8IZU1 332 aaPredicted RBP16.37■□□□□ 0.21
BRIP1-206ENST00000584322 IQGAP2Q13576 1575 aa16.37■□□□□ 0.21
BRIP1-206ENST00000584322 SHROOM2Q13796 1616 aa16.37■□□□□ 0.21
BRIP1-206ENST00000584322 SPRYD3Q8NCJ5 442 aa16.35■□□□□ 0.21
BRIP1-206ENST00000584322 FAM212AQ96EL1 285 aa16.34■□□□□ 0.21
BRIP1-206ENST00000584322 MNX1P50219 401 aaPredicted RBP16.33■□□□□ 0.2
BRIP1-206ENST00000584322 UGGT2Q9NYU1 1516 aa16.31■□□□□ 0.2
BRIP1-206ENST00000584322 TAOK2Q9UL54 1235 aa16.31■□□□□ 0.2
BRIP1-206ENST00000584322 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms