RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 CHD1O14646 1710 aa20.08■□□□□ 0.81
SNRPD1-204ENST00000582475 ADAMTS12P58397 1594 aa20.07■□□□□ 0.8
SNRPD1-204ENST00000582475 CSRNP3Q8WYN3 585 aa20.06■□□□□ 0.8
SNRPD1-204ENST00000582475 FAM9AQ8IZU1 332 aaPredicted RBP20.05■□□□□ 0.8
SNRPD1-204ENST00000582475 GRIN2AQ12879 1464 aa20.05■□□□□ 0.8
SNRPD1-204ENST00000582475 EEA1Q15075 1411 aa20■□□□□ 0.79
SNRPD1-204ENST00000582475 CUL7Q14999 1698 aa19.99■□□□□ 0.79
SNRPD1-204ENST00000582475 NUP160Q12769 1436 aa19.95■□□□□ 0.78
SNRPD1-204ENST00000582475 CNKSR2Q8WXI2 1034 aa19.95■□□□□ 0.78
SNRPD1-204ENST00000582475 RAPGEF2Q9Y4G8 1499 aa19.94■□□□□ 0.78
SNRPD1-204ENST00000582475 PRXQ9BXM0 1461 aa19.91■□□□□ 0.78
SNRPD1-204ENST00000582475 CEP170Q5SW79 1584 aa19.91■□□□□ 0.78
SNRPD1-204ENST00000582475 CLASP1Q7Z460 1538 aa19.9■□□□□ 0.78
SNRPD1-204ENST00000582475 JPH4Q96JJ6 628 aa19.89■□□□□ 0.77
SNRPD1-204ENST00000582475 KIAA0586Q9BVV6 1533 aa19.84■□□□□ 0.77
SNRPD1-204ENST00000582475 ARHGEF11O15085 1522 aa19.79■□□□□ 0.76
SNRPD1-204ENST00000582475 HOXD11P31277 338 aaPredicted RBP19.78■□□□□ 0.76
SNRPD1-204ENST00000582475 EHMT2Q96KQ7 1210 aa19.78■□□□□ 0.76
SNRPD1-204ENST00000582475 RIMBP3CA6NJZ7 1639 aa19.76■□□□□ 0.75
SNRPD1-204ENST00000582475 RIMBP3BA6NNM3 1639 aa19.76■□□□□ 0.75
SNRPD1-204ENST00000582475 RIMBP3Q9UFD9 1639 aa19.76■□□□□ 0.75
SNRPD1-204ENST00000582475 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
SNRPD1-204ENST00000582475 PRG4Q92954 1404 aaPredicted RBP19.75■□□□□ 0.75
SNRPD1-204ENST00000582475 UBTFP17480 764 aaKnown RBP19.73■□□□□ 0.75
SNRPD1-204ENST00000582475 SHROOM2Q13796 1616 aa19.71■□□□□ 0.75
SNRPD1-204ENST00000582475 KIF21BO75037 1637 aa19.7■□□□□ 0.74
SNRPD1-204ENST00000582475 DCAF8L1A6NGE4 600 aa19.7■□□□□ 0.74
SNRPD1-204ENST00000582475 RNF216Q9NWF9 866 aaPredicted RBP19.7■□□□□ 0.74
SNRPD1-204ENST00000582475 IQGAP2Q13576 1575 aa19.69■□□□□ 0.74
SNRPD1-204ENST00000582475 NCBP3Q53F19 620 aaKnown RBP19.68■□□□□ 0.74
SNRPD1-204ENST00000582475 ERCC6L2Q5T890 1561 aa19.68■□□□□ 0.74
SNRPD1-204ENST00000582475 GOLGA3Q08378 1498 aa19.67■□□□□ 0.74
SNRPD1-204ENST00000582475 ARAP1Q96P48 1450 aa19.66■□□□□ 0.74
SNRPD1-204ENST00000582475 CARMIL2Q6F5E8 1435 aa19.64■□□□□ 0.73
SNRPD1-204ENST00000582475 RANGAP1P46060 587 aaPredicted RBP19.63■□□□□ 0.73
SNRPD1-204ENST00000582475 CTTNBP2Q8WZ74 1663 aa19.62■□□□□ 0.73
SNRPD1-204ENST00000582475 UGGT2Q9NYU1 1516 aa19.61■□□□□ 0.73
SNRPD1-204ENST00000582475 TTBK1Q5TCY1 1321 aaPredicted RBP19.6■□□□□ 0.73
SNRPD1-204ENST00000582475 DISP1Q96F81 1524 aa19.58■□□□□ 0.73
SNRPD1-204ENST00000582475 TNIKQ9UKE5 1360 aa19.57■□□□□ 0.72
SNRPD1-204ENST00000582475 P3H3Q8IVL6 736 aa19.57■□□□□ 0.72
SNRPD1-204ENST00000582475 PTPRGP23470 1445 aa19.57■□□□□ 0.72
SNRPD1-204ENST00000582475 LOC105371045A0A1W2PR82 267 aa19.55■□□□□ 0.72
SNRPD1-204ENST00000582475 KIAA0556O60303 1618 aa19.49■□□□□ 0.71
SNRPD1-204ENST00000582475 NPM1P06748 294 aaKnown RBP eCLIP19.44■□□□□ 0.7
SNRPD1-204ENST00000582475 UACAQ9BZF9 1416 aa19.42■□□□□ 0.7
SNRPD1-204ENST00000582475 SAMD9Q5K651 1589 aa19.41■□□□□ 0.7
SNRPD1-204ENST00000582475 NPM3O75607 178 aaKnown RBP19.4■□□□□ 0.7
SNRPD1-204ENST00000582475 FHOD3Q2V2M9 1422 aa19.4■□□□□ 0.7
SNRPD1-204ENST00000582475 EFCAB5A4FU69 1503 aa19.38■□□□□ 0.69
SNRPD1-204ENST00000582475 ARHGAP35Q9NRY4 1499 aa19.37■□□□□ 0.69
SNRPD1-204ENST00000582475 UHRF1BP1LA0JNW5 1464 aa19.35■□□□□ 0.69
SNRPD1-204ENST00000582475 PLB1Q6P1J6 1458 aa19.35■□□□□ 0.69
SNRPD1-204ENST00000582475 CLIP1P30622 1438 aa19.34■□□□□ 0.69
SNRPD1-204ENST00000582475 ADCY10Q96PN6 1610 aa19.33■□□□□ 0.68
SNRPD1-204ENST00000582475 ABCC2Q92887 1545 aa19.3■□□□□ 0.68
SNRPD1-204ENST00000582475 ABCA8O94911 1581 aa19.29■□□□□ 0.68
SNRPD1-204ENST00000582475 TRHP20396 242 aaPredicted RBP19.29■□□□□ 0.68
SNRPD1-204ENST00000582475 CEP162Q5TB80 1403 aa19.28■□□□□ 0.68
SNRPD1-204ENST00000582475 ARID3CA6NKF2 412 aa19.27■□□□□ 0.68
SNRPD1-204ENST00000582475 ATP1B4Q9UN42 357 aaPredicted RBP19.27■□□□□ 0.68
SNRPD1-204ENST00000582475 FMN1Q68DA7 1419 aa19.26■□□□□ 0.67
SNRPD1-204ENST00000582475 KCNA4P22459 653 aa19.25■□□□□ 0.67
SNRPD1-204ENST00000582475 KDM5BQ9UGL1 1544 aa19.25■□□□□ 0.67
SNRPD1-204ENST00000582475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.24■□□□□ 0.67
SNRPD1-204ENST00000582475 HNRNPUL2Q1KMD3 747 aaKnown RBP19.24■□□□□ 0.67
SNRPD1-204ENST00000582475 RAPGEF6Q8TEU7 1601 aa19.22■□□□□ 0.67
SNRPD1-204ENST00000582475 ATP10BO94823 1461 aa19.21■□□□□ 0.67
SNRPD1-204ENST00000582475 ASXL2Q76L83 1435 aa19.18■□□□□ 0.66
SNRPD1-204ENST00000582475 FAM69CQ0P6D2 419 aa19.18■□□□□ 0.66
SNRPD1-204ENST00000582475 MAPKBP1O60336 1514 aa19.18■□□□□ 0.66
SNRPD1-204ENST00000582475 NUP153P49790 1475 aaKnown RBP19.17■□□□□ 0.66
SNRPD1-204ENST00000582475 ZCCHC11Q5TAX3 1644 aaKnown RBP19.16■□□□□ 0.66
SNRPD1-204ENST00000582475 KCNH8Q96L42 1107 aa19.15■□□□□ 0.66
SNRPD1-204ENST00000582475 PLEKHD1A6NEE1 506 aa19.14■□□□□ 0.65
SNRPD1-204ENST00000582475 CASKIN1Q8WXD9 1431 aa19.14■□□□□ 0.65
SNRPD1-204ENST00000582475 ABCC10Q5T3U5 1492 aa19.12■□□□□ 0.65
SNRPD1-204ENST00000582475 CACNB1Q02641 598 aaPredicted RBP19.1■□□□□ 0.65
SNRPD1-204ENST00000582475 RNF39Q9H2S5 420 aa19.1■□□□□ 0.65
SNRPD1-204ENST00000582475 CDK11AQ9UQ88 783 aaPredicted RBP19.1■□□□□ 0.65
SNRPD1-204ENST00000582475 EPRSP07814 1512 aaKnown RBP19.09■□□□□ 0.65
SNRPD1-204ENST00000582475 WDR7Q9Y4E6 1490 aa19.09■□□□□ 0.65
SNRPD1-204ENST00000582475 HECW1Q76N89 1606 aa19.07■□□□□ 0.64
SNRPD1-204ENST00000582475 CDK13Q14004 1512 aaKnown RBP19.05■□□□□ 0.64
SNRPD1-204ENST00000582475 FYCO1Q9BQS8 1478 aa19.05■□□□□ 0.64
SNRPD1-204ENST00000582475 PCF11O94913 1555 aaKnown RBP19.04■□□□□ 0.64
SNRPD1-204ENST00000582475 VPS8Q8N3P4 1428 aa19.04■□□□□ 0.64
SNRPD1-204ENST00000582475 DIP2BQ9P265 1576 aa19.02■□□□□ 0.64
SNRPD1-204ENST00000582475 CCDC18Q5T9S5 1454 aa19.01■□□□□ 0.63
SNRPD1-204ENST00000582475 KIF13AQ9H1H9 1805 aa19■□□□□ 0.63
SNRPD1-204ENST00000582475 GLI2P10070 1586 aa19■□□□□ 0.63
SNRPD1-204ENST00000582475 LRRIQ1Q96JM4 1722 aa18.96■□□□□ 0.63
SNRPD1-204ENST00000582475 TROQ12816 1431 aaPredicted RBP18.95■□□□□ 0.62
SNRPD1-204ENST00000582475 CD109Q6YHK3 1445 aa18.95■□□□□ 0.62
SNRPD1-204ENST00000582475 APLP2Q06481 763 aa18.94■□□□□ 0.62
SNRPD1-204ENST00000582475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.91■□□□□ 0.621e-12■■■□□ 17.7
SNRPD1-204ENST00000582475 MTUS2Q5JR59 1369 aa18.9■□□□□ 0.62
SNRPD1-204ENST00000582475 TSPOAP1O95153 1857 aa18.9■□□□□ 0.62
SNRPD1-204ENST00000582475 MAGI3Q5TCQ9 1506 aa18.87■□□□□ 0.61
SNRPD1-204ENST00000582475 MAP3K4Q9Y6R4 1608 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms