RNA–Protein interactions for RNA: ENST00000581593.1

CDK12-206, Transcript of cyclin dependent kinase 12, humanhuman

TSL 3

Gene CDK12, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-206ENST00000581593 PHF12Q96QT6 1004 aa11.39□□□□□ -0.59
CDK12-206ENST00000581593 ZNF579Q8NAF0 562 aaKnown RBP11.35□□□□□ -0.59
CDK12-206ENST00000581593 CIZ1Q9ULV3 898 aaPredicted RBP11.35□□□□□ -0.59
CDK12-206ENST00000581593 CCDC61Q9Y6R9 512 aa11.33□□□□□ -0.6
CDK12-206ENST00000581593 GABBR2O75899 941 aa11.3□□□□□ -0.6
CDK12-206ENST00000581593 GSE1Q14687 1217 aa11.29□□□□□ -0.6
CDK12-206ENST00000581593 PYGBP11216 843 aa11.27□□□□□ -0.61
CDK12-206ENST00000581593 KIF12Q96FN5 646 aa11.24□□□□□ -0.61
CDK12-206ENST00000581593 MAP3K13O43283 966 aa11.23□□□□□ -0.61
CDK12-206ENST00000581593 GALR2O43603 387 aaPredicted RBP11.23□□□□□ -0.61
CDK12-206ENST00000581593 MS4A3Q96HJ5 214 aa11.22□□□□□ -0.61
CDK12-206ENST00000581593 PCDHB13Q9Y5F0 798 aa11.19□□□□□ -0.62
CDK12-206ENST00000581593 CLCN6P51797 869 aa11.16□□□□□ -0.62
CDK12-206ENST00000581593 IFNL1Q8IU54 200 aa11.14□□□□□ -0.63
CDK12-206ENST00000581593 DCBLD2Q96PD2 775 aa11.13□□□□□ -0.63
CDK12-206ENST00000581593 PCDHB8Q9UN66 801 aa11.13□□□□□ -0.63
CDK12-206ENST00000581593 TRPC6Q9Y210 931 aa11.12□□□□□ -0.63
CDK12-206ENST00000581593 ECM2O94769 699 aaPredicted RBP11.1□□□□□ -0.63
CDK12-206ENST00000581593 CHRM1P11229 460 aaPredicted RBP11.1□□□□□ -0.63
CDK12-206ENST00000581593 PKD2Q13563 968 aa11.1□□□□□ -0.63
CDK12-206ENST00000581593 TRIM41Q8WV44 630 aa11.09□□□□□ -0.63
CDK12-206ENST00000581593 SGIP1Q9BQI5 828 aa11.09□□□□□ -0.63
CDK12-206ENST00000581593 POTEIP0CG38 1075 aa11.06□□□□□ -0.64
CDK12-206ENST00000581593 ZNF467Q7Z7K2 595 aaPredicted RBP11.05□□□□□ -0.64
CDK12-206ENST00000581593 BMP2KQ9NSY1 1161 aaPredicted RBP11.03□□□□□ -0.64
CDK12-206ENST00000581593 RNF25Q96BH1 459 aaPredicted RBP11.02□□□□□ -0.65
CDK12-206ENST00000581593 TMEM106CQ9BVX2 250 aa11.01□□□□□ -0.65
CDK12-206ENST00000581593 TTLL13PA6NNM8 815 aa10.99□□□□□ -0.65
CDK12-206ENST00000581593 RIOK3O14730 519 aaKnown RBP10.99□□□□□ -0.65
CDK12-206ENST00000581593 RGL2O15211 777 aa10.99□□□□□ -0.65
CDK12-206ENST00000581593 ATMINO43313 823 aaPredicted RBP10.99□□□□□ -0.65
CDK12-206ENST00000581593 TIE1P35590 1138 aa10.99□□□□□ -0.65
CDK12-206ENST00000581593 PSEN1P49768 467 aa10.98□□□□□ -0.65
CDK12-206ENST00000581593 ATN1P54259 1190 aaPredicted RBP10.98□□□□□ -0.65
CDK12-206ENST00000581593 ASTLQ6HA08 431 aaPredicted RBP10.97□□□□□ -0.65
CDK12-206ENST00000581593 PELP1Q8IZL8 1130 aaKnown RBP10.97□□□□□ -0.65
CDK12-206ENST00000581593 PDAP1Q13442 181 aaKnown RBP10.96□□□□□ -0.65
CDK12-206ENST00000581593 RTN4Q9NQC3 1192 aaKnown RBP10.95□□□□□ -0.66
CDK12-206ENST00000581593 AMER1Q5JTC6 1135 aaPredicted RBP10.93□□□□□ -0.66
CDK12-206ENST00000581593 TRIM35Q9UPQ4 493 aa10.93□□□□□ -0.66
CDK12-206ENST00000581593 VGFO15240 615 aaPredicted RBP10.91□□□□□ -0.66
CDK12-206ENST00000581593 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.9□□□□□ -0.66
CDK12-206ENST00000581593 DCAF8L2P0C7V8 631 aa10.9□□□□□ -0.66
CDK12-206ENST00000581593 ZFP91Q96JP5 570 aaPredicted RBP10.9□□□□□ -0.66
CDK12-206ENST00000581593 GOLGA2Q08379 1002 aa10.87□□□□□ -0.67
CDK12-206ENST00000581593 CABP2Q9NPB3 220 aa10.87□□□□□ -0.67
CDK12-206ENST00000581593 METRNQ9UJH8 293 aa10.87□□□□□ -0.67
CDK12-206ENST00000581593 SLC39A7Q92504 469 aa10.86□□□□□ -0.67
CDK12-206ENST00000581593 TAOK2Q9UL54 1235 aa10.85□□□□□ -0.67
CDK12-206ENST00000581593 STK25O00506 426 aa10.84□□□□□ -0.67
CDK12-206ENST00000581593 BCL11BQ9C0K0 894 aaPredicted RBP10.83□□□□□ -0.68
CDK12-206ENST00000581593 STK24Q9Y6E0 443 aa10.83□□□□□ -0.68
CDK12-206ENST00000581593 C7P10643 843 aa10.82□□□□□ -0.68
CDK12-206ENST00000581593 MKRN3Q13064 507 aaKnown RBP10.82□□□□□ -0.68
CDK12-206ENST00000581593 SEC24BO95487 1268 aa10.81□□□□□ -0.68
CDK12-206ENST00000581593 CHGAP10645 457 aaKnown RBP10.78□□□□□ -0.68
CDK12-206ENST00000581593 IER5LQ5T953 404 aa10.78□□□□□ -0.68
CDK12-206ENST00000581593 EFCAB3Q8N7B9 438 aa10.78□□□□□ -0.68
CDK12-206ENST00000581593 COLQQ9Y215 455 aaPredicted RBP10.78□□□□□ -0.68
CDK12-206ENST00000581593 PLCG2P16885 1265 aa10.76□□□□□ -0.69
CDK12-206ENST00000581593 POTEFA5A3E0 1075 aa10.75□□□□□ -0.69
CDK12-206ENST00000581593 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.75□□□□□ -0.695e-7■■■■■ 29.2
CDK12-206ENST00000581593 IRX5P78411 483 aaPredicted RBP10.73□□□□□ -0.69
CDK12-206ENST00000581593 POTEB2H3BUK9 544 aa10.72□□□□□ -0.69
CDK12-206ENST00000581593 LHX8Q68G74 356 aa10.72□□□□□ -0.69
CDK12-206ENST00000581593 HS6ST3Q8IZP7 471 aa10.71□□□□□ -0.69
CDK12-206ENST00000581593 OCEL1Q9H607 264 aa10.71□□□□□ -0.69
CDK12-206ENST00000581593 PHF8Q9UPP1 1060 aa10.69□□□□□ -0.7
CDK12-206ENST00000581593 PDCD7Q8N8D1 485 aaKnown RBP10.67□□□□□ -0.7
CDK12-206ENST00000581593 DPY19L2Q6NUT2 758 aa10.66□□□□□ -0.7
CDK12-206ENST00000581593 SOX12O15370 315 aa10.65□□□□□ -0.7
CDK12-206ENST00000581593 POTEJP0CG39 1038 aa10.64□□□□□ -0.71
CDK12-206ENST00000581593 MFRPQ9BY79 579 aa10.62□□□□□ -0.71
CDK12-206ENST00000581593 NLRP6P59044 892 aa10.61□□□□□ -0.71
CDK12-206ENST00000581593 ILDR1Q86SU0 546 aaPredicted RBP10.6□□□□□ -0.71
CDK12-206ENST00000581593 MS4A4AQ96JQ5 239 aa10.6□□□□□ -0.71
CDK12-206ENST00000581593 NKX1-1Q15270 411 aaPredicted RBP10.59□□□□□ -0.71
CDK12-206ENST00000581593 FBXO22Q8NEZ5 403 aa10.59□□□□□ -0.71
CDK12-206ENST00000581593 G3V3G9 751 aa10.57□□□□□ -0.72
CDK12-206ENST00000581593 OTUD5Q96G74 571 aa10.56□□□□□ -0.72
CDK12-206ENST00000581593 L3MBTL3Q96JM7 780 aaPredicted RBP10.56□□□□□ -0.72
CDK12-206ENST00000581593 SCUBE2Q9NQ36 999 aa10.56□□□□□ -0.72
CDK12-206ENST00000581593 MAMSTRQ6ZN01 415 aa10.54□□□□□ -0.72
CDK12-206ENST00000581593 BOLA1Q9Y3E2 137 aa10.54□□□□□ -0.72
CDK12-206ENST00000581593 C3orf67Q6ZVT6 689 aa10.52□□□□□ -0.73
CDK12-206ENST00000581593 DNAJC5Q9H3Z4 198 aa10.51□□□□□ -0.73
CDK12-206ENST00000581593 PPP1R37O75864 691 aa10.5□□□□□ -0.73
CDK12-206ENST00000581593 MICALL2Q8IY33 904 aa10.49□□□□□ -0.73
CDK12-206ENST00000581593 BBXQ8WY36 941 aaPredicted RBP10.49□□□□□ -0.73
CDK12-206ENST00000581593 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.49□□□□□ -0.73
CDK12-206ENST00000581593 SLAIN1Q8ND83 568 aa10.47□□□□□ -0.73
CDK12-206ENST00000581593 GTPBP6O43824 516 aaPredicted RBP10.45□□□□□ -0.74
CDK12-206ENST00000581593 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.45□□□□□ -0.74
CDK12-206ENST00000581593 TMEM121BQ9BXQ6 578 aaPredicted RBP10.44□□□□□ -0.74
CDK12-206ENST00000581593 RYDENQ9NUL5 291 aaKnown RBP10.44□□□□□ -0.74
CDK12-206ENST00000581593 PAXIP1Q6ZW49 1069 aaPredicted RBP10.41□□□□□ -0.74
CDK12-206ENST00000581593 CFAP44Q96MT7 982 aa10.41□□□□□ -0.74
CDK12-206ENST00000581593 SPRYD3Q8NCJ5 442 aa10.38□□□□□ -0.75
CDK12-206ENST00000581593 TMEM92Q6UXU6 159 aa10.37□□□□□ -0.75
CDK12-206ENST00000581593 TMC2Q8TDI7 906 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms