RNA–Protein interactions for RNA: ENST00000581540.5

SUPT4H1-207, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-207ENST00000581540 NKX1-1Q15270 411 aaPredicted RBP13.8□□□□□ -0.2
SUPT4H1-207ENST00000581540 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
SUPT4H1-207ENST00000581540 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
SUPT4H1-207ENST00000581540 RYDENQ9NUL5 291 aaKnown RBP13.79□□□□□ -0.2
SUPT4H1-207ENST00000581540 GSE1Q14687 1217 aa13.76□□□□□ -0.21
SUPT4H1-207ENST00000581540 LMOD2Q6P5Q4 547 aa13.76□□□□□ -0.21
SUPT4H1-207ENST00000581540 BRPF1P55201 1214 aaPredicted RBP13.75□□□□□ -0.21
SUPT4H1-207ENST00000581540 RNF25Q96BH1 459 aaPredicted RBP13.73□□□□□ -0.21
SUPT4H1-207ENST00000581540 RIOK3O14730 519 aaKnown RBP13.72□□□□□ -0.21
SUPT4H1-207ENST00000581540 RB1CC1Q8TDY2 1594 aa13.71□□□□□ -0.22
SUPT4H1-207ENST00000581540 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.7□□□□□ -0.22
SUPT4H1-207ENST00000581540 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
SUPT4H1-207ENST00000581540 CAPN15O75808 1086 aa13.67□□□□□ -0.22
SUPT4H1-207ENST00000581540 SPDYE2BA6NHP3 402 aa13.66□□□□□ -0.22
SUPT4H1-207ENST00000581540 STK25O00506 426 aa13.66□□□□□ -0.22
SUPT4H1-207ENST00000581540 SPDYE6P0CI01 402 aa13.66□□□□□ -0.22
SUPT4H1-207ENST00000581540 SPDYE2Q495Y8 402 aa13.66□□□□□ -0.22
SUPT4H1-207ENST00000581540 SSUH2Q9Y2M2 353 aa13.66□□□□□ -0.22
SUPT4H1-207ENST00000581540 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
SUPT4H1-207ENST00000581540 NEUROD2Q15784 382 aa13.63□□□□□ -0.23
SUPT4H1-207ENST00000581540 VGFO15240 615 aaPredicted RBP13.61□□□□□ -0.23
SUPT4H1-207ENST00000581540 WDR70Q9NW82 654 aa13.61□□□□□ -0.23
SUPT4H1-207ENST00000581540 KCNV2Q8TDN2 545 aa13.55□□□□□ -0.24
SUPT4H1-207ENST00000581540 NACADO15069 1562 aa13.53□□□□□ -0.24
SUPT4H1-207ENST00000581540 UBTFP17480 764 aaKnown RBP13.5□□□□□ -0.25
SUPT4H1-207ENST00000581540 SGIP1Q9BQI5 828 aa13.49□□□□□ -0.25
SUPT4H1-207ENST00000581540 ABCB7O75027 752 aa13.48□□□□□ -0.25
SUPT4H1-207ENST00000581540 DCAF8Q5TAQ9 597 aa13.48□□□□□ -0.25
SUPT4H1-207ENST00000581540 ZC3H15Q8WU90 426 aaKnown RBP13.48□□□□□ -0.25
SUPT4H1-207ENST00000581540 STK24Q9Y6E0 443 aa13.48□□□□□ -0.25
SUPT4H1-207ENST00000581540 NPM2Q86SE8 214 aaKnown RBP13.46□□□□□ -0.25
SUPT4H1-207ENST00000581540 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
SUPT4H1-207ENST00000581540 BCL11BQ9C0K0 894 aaPredicted RBP13.45□□□□□ -0.26
SUPT4H1-207ENST00000581540 TRIM26Q12899 539 aaPredicted RBP13.43□□□□□ -0.26
SUPT4H1-207ENST00000581540 SLC24A3Q9HC58 644 aa13.43□□□□□ -0.26
SUPT4H1-207ENST00000581540 NUBP1P53384 320 aa13.42□□□□□ -0.26
SUPT4H1-207ENST00000581540 FAM212AQ96EL1 285 aa13.4□□□□□ -0.26
SUPT4H1-207ENST00000581540 RSPH6AQ9H0K4 717 aa13.4□□□□□ -0.26
SUPT4H1-207ENST00000581540 ZMYND15Q9H091 742 aa13.39□□□□□ -0.27
SUPT4H1-207ENST00000581540 CHRM1P11229 460 aaPredicted RBP13.38□□□□□ -0.27
SUPT4H1-207ENST00000581540 UNC13AQ9UPW8 1703 aa13.37□□□□□ -0.27
SUPT4H1-207ENST00000581540 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.37□□□□□ -0.27
SUPT4H1-207ENST00000581540 ARHGEF1Q92888 912 aaKnown RBP13.37□□□□□ -0.27
SUPT4H1-207ENST00000581540 ZFP91Q96JP5 570 aaPredicted RBP13.37□□□□□ -0.27
SUPT4H1-207ENST00000581540 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
SUPT4H1-207ENST00000581540 ZMYND10O75800 440 aa13.27□□□□□ -0.29
SUPT4H1-207ENST00000581540 BICRAQ9NZM4 1560 aa13.27□□□□□ -0.29
SUPT4H1-207ENST00000581540 TESPA1A2RU30 521 aaPredicted RBP13.26□□□□□ -0.29
SUPT4H1-207ENST00000581540 HRCP23327 699 aa13.26□□□□□ -0.29
SUPT4H1-207ENST00000581540 MYO15BQ96JP2 1530 aa13.25□□□□□ -0.29
SUPT4H1-207ENST00000581540 SMYD5Q6GMV2 418 aa13.25□□□□□ -0.29
SUPT4H1-207ENST00000581540 RNF39Q9H2S5 420 aa13.25□□□□□ -0.29
SUPT4H1-207ENST00000581540 C1QBPQ07021 282 aaKnown RBP13.23□□□□□ -0.29
SUPT4H1-207ENST00000581540 E2F4Q16254 413 aa13.2□□□□□ -0.3
SUPT4H1-207ENST00000581540 SEMA3EO15041 775 aa13.19□□□□□ -0.3
SUPT4H1-207ENST00000581540 SHROOM4Q9ULL8 1493 aa13.17□□□□□ -0.3
SUPT4H1-207ENST00000581540 ARID3AQ99856 593 aa13.17□□□□□ -0.3
SUPT4H1-207ENST00000581540 CCDC9Q9Y3X0 531 aaKnown RBP13.16□□□□□ -0.3
SUPT4H1-207ENST00000581540 ZBTB7CA1YPR0 619 aa13.15□□□□□ -0.3
SUPT4H1-207ENST00000581540 BARGINQ6ZT62 677 aa13.15□□□□□ -0.3
SUPT4H1-207ENST00000581540 AK7Q96M32 723 aa13.14□□□□□ -0.31
SUPT4H1-207ENST00000581540 CECR2Q9BXF3 1484 aa13.13□□□□□ -0.31
SUPT4H1-207ENST00000581540 CC2D2AQ9P2K1 1620 aa13.11□□□□□ -0.31
SUPT4H1-207ENST00000581540 IL27Q8NEV9 243 aa13.1□□□□□ -0.31
SUPT4H1-207ENST00000581540 PDIA4P13667 645 aaKnown RBP13.09□□□□□ -0.31
SUPT4H1-207ENST00000581540 PYGBP11216 843 aa13.08□□□□□ -0.32
SUPT4H1-207ENST00000581540 GPBP1L1Q9HC44 474 aaPredicted RBP13.08□□□□□ -0.32
SUPT4H1-207ENST00000581540 DSG3P32926 999 aa13.06□□□□□ -0.32
SUPT4H1-207ENST00000581540 RASEFQ8IZ41 740 aa13.05□□□□□ -0.32
SUPT4H1-207ENST00000581540 KDM4CQ9H3R0 1056 aa13.05□□□□□ -0.32
SUPT4H1-207ENST00000581540 ZNF467Q7Z7K2 595 aaPredicted RBP13.02□□□□□ -0.33
SUPT4H1-207ENST00000581540 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.33
SUPT4H1-207ENST00000581540 C1orf115Q9H7X2 142 aa13.02□□□□□ -0.33
SUPT4H1-207ENST00000581540 EIF4G1Q04637 1599 aaKnown RBP12.99□□□□□ -0.33
SUPT4H1-207ENST00000581540 APBB1O00213 710 aa12.99□□□□□ -0.33
SUPT4H1-207ENST00000581540 FLIIQ13045 1269 aa12.97□□□□□ -0.33
SUPT4H1-207ENST00000581540 PDAP1Q13442 181 aaKnown RBP12.97□□□□□ -0.33
SUPT4H1-207ENST00000581540 MNX1P50219 401 aaPredicted RBP12.96□□□□□ -0.33
SUPT4H1-207ENST00000581540 GPIHBP1Q8IV16 184 aa12.96□□□□□ -0.33
SUPT4H1-207ENST00000581540 MFRPQ9BY79 579 aa12.96□□□□□ -0.33
SUPT4H1-207ENST00000581540 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
SUPT4H1-207ENST00000581540 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
SUPT4H1-207ENST00000581540 ARIH1Q9Y4X5 557 aaPredicted RBP12.94□□□□□ -0.34
SUPT4H1-207ENST00000581540 ARID3CA6NKF2 412 aa12.93□□□□□ -0.34
SUPT4H1-207ENST00000581540 MKRN3Q13064 507 aaKnown RBP12.93□□□□□ -0.34
SUPT4H1-207ENST00000581540 PDE4DQ08499 809 aa12.92□□□□□ -0.34
SUPT4H1-207ENST00000581540 DCAF1Q9Y4B6 1507 aa12.9□□□□□ -0.34
SUPT4H1-207ENST00000581540 TRIM66O15016 1216 aa12.9□□□□□ -0.34
SUPT4H1-207ENST00000581540 POTEDQ86YR6 584 aa12.89□□□□□ -0.35
SUPT4H1-207ENST00000581540 PRR29P0C7W0 189 aa12.88□□□□□ -0.35
SUPT4H1-207ENST00000581540 ZNF316A6NFI3 1004 aaPredicted RBP12.85□□□□□ -0.35
SUPT4H1-207ENST00000581540 PDE4AP27815 886 aa12.84□□□□□ -0.35
SUPT4H1-207ENST00000581540 NLRP6P59044 892 aa12.84□□□□□ -0.35
SUPT4H1-207ENST00000581540 DDRGK1Q96HY6 314 aa12.84□□□□□ -0.35
SUPT4H1-207ENST00000581540 RBM26Q5T8P6 1007 aaKnown RBP12.83□□□□□ -0.36
SUPT4H1-207ENST00000581540 LARP6Q9BRS8 491 aaKnown RBP12.83□□□□□ -0.36
SUPT4H1-207ENST00000581540 PPP1R37O75864 691 aa12.82□□□□□ -0.36
SUPT4H1-207ENST00000581540 MFSD10Q14728 455 aa12.81□□□□□ -0.36
SUPT4H1-207ENST00000581540 ZCCHC6Q5VYS8 1495 aaKnown RBP12.8□□□□□ -0.36
SUPT4H1-207ENST00000581540 NCKAP5LQ9HCH0 1330 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms