RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 PRG4Q92954 1404 aaPredicted RBP21.57■■□□□ 1.04
CBX1-206ENST00000581003 JPH4Q96JJ6 628 aa21.53■■□□□ 1.04
CBX1-206ENST00000581003 KIAA0586Q9BVV6 1533 aa21.51■■□□□ 1.03
CBX1-206ENST00000581003 RAPGEF2Q9Y4G8 1499 aa21.44■■□□□ 1.02
CBX1-206ENST00000581003 TRHP20396 242 aaPredicted RBP21.43■■□□□ 1.02
CBX1-206ENST00000581003 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
CBX1-206ENST00000581003 PRXQ9BXM0 1461 aa21.34■■□□□ 1.01
CBX1-206ENST00000581003 ADCY10Q96PN6 1610 aa21.33■■□□□ 1
CBX1-206ENST00000581003 TTBK1Q5TCY1 1321 aaPredicted RBP21.32■■□□□ 1
CBX1-206ENST00000581003 DISP1Q96F81 1524 aa21.31■■□□□ 1
CBX1-206ENST00000581003 CTTNBP2Q8WZ74 1663 aa21.28■■□□□ 1
CBX1-206ENST00000581003 UGGT2Q9NYU1 1516 aa21.27■■□□□ 1
CBX1-206ENST00000581003 FAM9AQ8IZU1 332 aaPredicted RBP21.25■□□□□ 0.99
CBX1-206ENST00000581003 PTPRGP23470 1445 aa21.24■□□□□ 0.99
CBX1-206ENST00000581003 CARMIL2Q6F5E8 1435 aa21.24■□□□□ 0.99
CBX1-206ENST00000581003 KIAA0556O60303 1618 aa21.23■□□□□ 0.99
CBX1-206ENST00000581003 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
CBX1-206ENST00000581003 TNIKQ9UKE5 1360 aa21.23■□□□□ 0.99
CBX1-206ENST00000581003 CSRNP3Q8WYN3 585 aa21.21■□□□□ 0.99
CBX1-206ENST00000581003 KIF13AQ9H1H9 1805 aa21.16■□□□□ 0.98
CBX1-206ENST00000581003 MAPKBP1O60336 1514 aa21.14■□□□□ 0.98
CBX1-206ENST00000581003 EEA1Q15075 1411 aa21.14■□□□□ 0.98
CBX1-206ENST00000581003 DIP2BQ9P265 1576 aa21.1■□□□□ 0.97
CBX1-206ENST00000581003 ABCC2Q92887 1545 aa21.1■□□□□ 0.97
CBX1-206ENST00000581003 UACAQ9BZF9 1416 aa21.1■□□□□ 0.97
CBX1-206ENST00000581003 NPM1P06748 294 aaKnown RBP eCLIP21.09■□□□□ 0.97
CBX1-206ENST00000581003 ABCC10Q5T3U5 1492 aa21.08■□□□□ 0.97
CBX1-206ENST00000581003 UHRF1BP1LA0JNW5 1464 aa21.07■□□□□ 0.96
CBX1-206ENST00000581003 PLB1Q6P1J6 1458 aa21.07■□□□□ 0.96
CBX1-206ENST00000581003 EHMT2Q96KQ7 1210 aa21.07■□□□□ 0.96
CBX1-206ENST00000581003 KIF21BO75037 1637 aa21.05■□□□□ 0.96
CBX1-206ENST00000581003 P3H3Q8IVL6 736 aa21.05■□□□□ 0.96
CBX1-206ENST00000581003 GOLGA3Q08378 1498 aa21.05■□□□□ 0.96
CBX1-206ENST00000581003 FAM69CQ0P6D2 419 aa21.04■□□□□ 0.96
CBX1-206ENST00000581003 RANGAP1P46060 587 aaPredicted RBP21.03■□□□□ 0.96
CBX1-206ENST00000581003 ZCCHC11Q5TAX3 1644 aaKnown RBP21.02■□□□□ 0.96
CBX1-206ENST00000581003 ASXL2Q76L83 1435 aa21.02■□□□□ 0.96
CBX1-206ENST00000581003 SAMD9Q5K651 1589 aa21.02■□□□□ 0.95
CBX1-206ENST00000581003 ABCA8O94911 1581 aa21.01■□□□□ 0.95
CBX1-206ENST00000581003 KDM5BQ9UGL1 1544 aa21■□□□□ 0.95
CBX1-206ENST00000581003 ARID3CA6NKF2 412 aa20.93■□□□□ 0.94
CBX1-206ENST00000581003 FHOD3Q2V2M9 1422 aa20.93■□□□□ 0.94
CBX1-206ENST00000581003 TSPOAP1O95153 1857 aa20.92■□□□□ 0.94
CBX1-206ENST00000581003 EPRSP07814 1512 aaKnown RBP20.88■□□□□ 0.93
CBX1-206ENST00000581003 PPRC1Q5VV67 1664 aaKnown RBP20.87■□□□□ 0.93
CBX1-206ENST00000581003 GLI2P10070 1586 aa20.86■□□□□ 0.93
CBX1-206ENST00000581003 WDR7Q9Y4E6 1490 aa20.86■□□□□ 0.93
CBX1-206ENST00000581003 UBTFP17480 764 aaKnown RBP20.84■□□□□ 0.93
CBX1-206ENST00000581003 RAPGEF6Q8TEU7 1601 aa20.84■□□□□ 0.93
CBX1-206ENST00000581003 ATP10BO94823 1461 aa20.82■□□□□ 0.92
CBX1-206ENST00000581003 EFCAB5A4FU69 1503 aa20.82■□□□□ 0.92
CBX1-206ENST00000581003 MAP3K4Q9Y6R4 1608 aa20.82■□□□□ 0.92
CBX1-206ENST00000581003 NUP153P49790 1475 aaKnown RBP20.8■□□□□ 0.92
CBX1-206ENST00000581003 KDM6BO15054 1643 aa20.78■□□□□ 0.92
CBX1-206ENST00000581003 ARHGAP35Q9NRY4 1499 aa20.77■□□□□ 0.92
CBX1-206ENST00000581003 KCNH8Q96L42 1107 aa20.76■□□□□ 0.91
CBX1-206ENST00000581003 COL17A1Q9UMD9 1497 aaPredicted RBP20.71■□□□□ 0.91
CBX1-206ENST00000581003 CDK13Q14004 1512 aaKnown RBP20.68■□□□□ 0.9
CBX1-206ENST00000581003 CFAP43Q8NDM7 1665 aa20.67■□□□□ 0.9
CBX1-206ENST00000581003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.67■□□□□ 0.9
CBX1-206ENST00000581003 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
CBX1-206ENST00000581003 CD109Q6YHK3 1445 aa20.66■□□□□ 0.9
CBX1-206ENST00000581003 TEX14Q8IWB6 1497 aa20.63■□□□□ 0.89
CBX1-206ENST00000581003 MAGI3Q5TCQ9 1506 aa20.63■□□□□ 0.89
CBX1-206ENST00000581003 ABCA9Q8IUA7 1624 aa20.62■□□□□ 0.89
CBX1-206ENST00000581003 HECW1Q76N89 1606 aa20.59■□□□□ 0.89
CBX1-206ENST00000581003 FMN1Q68DA7 1419 aa20.59■□□□□ 0.89
CBX1-206ENST00000581003 LRRIQ1Q96JM4 1722 aa20.58■□□□□ 0.89
CBX1-206ENST00000581003 ATP1B4Q9UN42 357 aaPredicted RBP20.58■□□□□ 0.89
CBX1-206ENST00000581003 PCF11O94913 1555 aaKnown RBP20.57■□□□□ 0.88
CBX1-206ENST00000581003 TTC37Q6PGP7 1564 aa20.55■□□□□ 0.88
CBX1-206ENST00000581003 CLIP1P30622 1438 aa20.53■□□□□ 0.88
CBX1-206ENST00000581003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.53■□□□□ 0.881e-6■□□□□ 10.3
CBX1-206ENST00000581003 PLEKHD1A6NEE1 506 aa20.51■□□□□ 0.87
CBX1-206ENST00000581003 KIF14Q15058 1648 aa20.48■□□□□ 0.87
CBX1-206ENST00000581003 CASKIN1Q8WXD9 1431 aa20.46■□□□□ 0.87
CBX1-206ENST00000581003 ARAP3Q8WWN8 1544 aa20.45■□□□□ 0.86
CBX1-206ENST00000581003 FRMPD1Q5SYB0 1578 aa20.44■□□□□ 0.86
CBX1-206ENST00000581003 KDM4FA0A1W2PPD8 638 aa20.44■□□□□ 0.86
CBX1-206ENST00000581003 LOC105371045A0A1W2PR82 267 aa20.43■□□□□ 0.86
CBX1-206ENST00000581003 AEBP2Q6ZN18 517 aaPredicted RBP20.43■□□□□ 0.86
CBX1-206ENST00000581003 CEP162Q5TB80 1403 aa20.42■□□□□ 0.86
CBX1-206ENST00000581003 NEO1Q92859 1461 aa20.42■□□□□ 0.86
CBX1-206ENST00000581003 RAPGEF3O95398 923 aa20.41■□□□□ 0.86
CBX1-206ENST00000581003 FYCO1Q9BQS8 1478 aa20.41■□□□□ 0.86
CBX1-206ENST00000581003 TROQ12816 1431 aaPredicted RBP20.4■□□□□ 0.86
CBX1-206ENST00000581003 FANCAO15360 1455 aa20.39■□□□□ 0.85
CBX1-206ENST00000581003 ADGRL1O94910 1474 aa20.37■□□□□ 0.85
CBX1-206ENST00000581003 CCDC18Q5T9S5 1454 aa20.37■□□□□ 0.85
CBX1-206ENST00000581003 AKNAQ7Z591 1439 aa20.36■□□□□ 0.85
CBX1-206ENST00000581003 PLCH2O75038 1416 aa20.34■□□□□ 0.85
CBX1-206ENST00000581003 MYO5CQ9NQX4 1742 aa20.33■□□□□ 0.85
CBX1-206ENST00000581003 CFAP74Q9C0B2 1584 aa20.33■□□□□ 0.84
CBX1-206ENST00000581003 RICTORQ6R327 1708 aa20.33■□□□□ 0.84
CBX1-206ENST00000581003 PHLDB1Q86UU1 1377 aa20.33■□□□□ 0.84
CBX1-206ENST00000581003 CDK11AQ9UQ88 783 aaPredicted RBP20.32■□□□□ 0.84
CBX1-206ENST00000581003 DENND4BO75064 1496 aaPredicted RBP20.3■□□□□ 0.84
CBX1-206ENST00000581003 ARHGAP5Q13017 1502 aa20.27■□□□□ 0.84
CBX1-206ENST00000581003 SCAPERQ9BY12 1400 aa20.26■□□□□ 0.83
CBX1-206ENST00000581003 CDC42BPBQ9Y5S2 1711 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms