RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 RUSC2Q8N2Y8 1516 aa30.38■■■□□ 2.45
CSNK1D-214ENST00000580565 KIAA0586Q9BVV6 1533 aa30.32■■■□□ 2.44
CSNK1D-214ENST00000580565 CUL7Q14999 1698 aa30.3■■■□□ 2.44
CSNK1D-214ENST00000580565 CARMIL1Q5VZK9 1371 aa30.28■■■□□ 2.44
CSNK1D-214ENST00000580565 NPM1P06748 294 aaKnown RBP eCLIP30.18■■■□□ 2.42
CSNK1D-214ENST00000580565 PTPRGP23470 1445 aa30.05■■■□□ 2.4
CSNK1D-214ENST00000580565 ADCY10Q96PN6 1610 aa30.05■■■□□ 2.4
CSNK1D-214ENST00000580565 FAM69CQ0P6D2 419 aa30.04■■■□□ 2.4
CSNK1D-214ENST00000580565 CARMIL2Q6F5E8 1435 aa30.03■■■□□ 2.4
CSNK1D-214ENST00000580565 MAPKBP1O60336 1514 aa30.01■■■□□ 2.4
CSNK1D-214ENST00000580565 ABCC10Q5T3U5 1492 aa30.01■■■□□ 2.4
CSNK1D-214ENST00000580565 TTBK1Q5TCY1 1321 aaPredicted RBP30■■■□□ 2.39
CSNK1D-214ENST00000580565 TNIKQ9UKE5 1360 aa30■■■□□ 2.39
CSNK1D-214ENST00000580565 RAPGEF2Q9Y4G8 1499 aa29.99■■■□□ 2.39
CSNK1D-214ENST00000580565 IQGAP2Q13576 1575 aa29.98■■■□□ 2.39
CSNK1D-214ENST00000580565 KIF13AQ9H1H9 1805 aa29.97■■■□□ 2.39
CSNK1D-214ENST00000580565 DISP1Q96F81 1524 aa29.88■■■□□ 2.37
CSNK1D-214ENST00000580565 DIP2BQ9P265 1576 aa29.87■■■□□ 2.37
CSNK1D-214ENST00000580565 AEBP2Q6ZN18 517 aaPredicted RBP29.86■■■□□ 2.37
CSNK1D-214ENST00000580565 ABCC2Q92887 1545 aa29.84■■■□□ 2.37
CSNK1D-214ENST00000580565 UGGT2Q9NYU1 1516 aa29.83■■■□□ 2.37
CSNK1D-214ENST00000580565 UHRF1BP1LA0JNW5 1464 aa29.8■■■□□ 2.36
CSNK1D-214ENST00000580565 UACAQ9BZF9 1416 aa29.8■■■□□ 2.36
CSNK1D-214ENST00000580565 ASXL2Q76L83 1435 aa29.74■■■□□ 2.35
CSNK1D-214ENST00000580565 PLB1Q6P1J6 1458 aa29.72■■■□□ 2.35
CSNK1D-214ENST00000580565 PRXQ9BXM0 1461 aa29.72■■■□□ 2.35
CSNK1D-214ENST00000580565 KIAA0556O60303 1618 aa29.7■■■□□ 2.34
CSNK1D-214ENST00000580565 KDM5BQ9UGL1 1544 aa29.66■■■□□ 2.34
CSNK1D-214ENST00000580565 GOLGA3Q08378 1498 aa29.62■■■□□ 2.33
CSNK1D-214ENST00000580565 GLI2P10070 1586 aa29.6■■■□□ 2.33
CSNK1D-214ENST00000580565 CTTNBP2Q8WZ74 1663 aa29.59■■■□□ 2.33
CSNK1D-214ENST00000580565 KDM6BO15054 1643 aa29.58■■■□□ 2.33
CSNK1D-214ENST00000580565 CSRNP3Q8WYN3 585 aa29.58■■■□□ 2.33
CSNK1D-214ENST00000580565 TSPOAP1O95153 1857 aa29.57■■■□□ 2.32
CSNK1D-214ENST00000580565 EPRSP07814 1512 aaKnown RBP29.55■■■□□ 2.32
CSNK1D-214ENST00000580565 ZCCHC11Q5TAX3 1644 aaKnown RBP29.52■■■□□ 2.32
CSNK1D-214ENST00000580565 ABCA8O94911 1581 aa29.45■■■□□ 2.31
CSNK1D-214ENST00000580565 WDR7Q9Y4E6 1490 aa29.45■■■□□ 2.31
CSNK1D-214ENST00000580565 PPRC1Q5VV67 1664 aaKnown RBP29.44■■■□□ 2.3
CSNK1D-214ENST00000580565 P3H3Q8IVL6 736 aa29.43■■■□□ 2.3
CSNK1D-214ENST00000580565 FAM9AQ8IZU1 332 aaPredicted RBP29.43■■■□□ 2.3
CSNK1D-214ENST00000580565 EEA1Q15075 1411 aa29.41■■■□□ 2.3
CSNK1D-214ENST00000580565 MAP3K4Q9Y6R4 1608 aa29.4■■■□□ 2.3
CSNK1D-214ENST00000580565 TEX14Q8IWB6 1497 aa29.37■■■□□ 2.29
CSNK1D-214ENST00000580565 KDM4FA0A1W2PPD8 638 aa29.37■■■□□ 2.29
CSNK1D-214ENST00000580565 KCNH8Q96L42 1107 aa29.37■■■□□ 2.29
CSNK1D-214ENST00000580565 COL17A1Q9UMD9 1497 aaPredicted RBP29.36■■■□□ 2.29
CSNK1D-214ENST00000580565 ARID3CA6NKF2 412 aa29.3■■■□□ 2.28
CSNK1D-214ENST00000580565 CD109Q6YHK3 1445 aa29.29■■■□□ 2.28
CSNK1D-214ENST00000580565 ATP10BO94823 1461 aa29.26■■■□□ 2.27
CSNK1D-214ENST00000580565 SAMD9Q5K651 1589 aa29.26■■■□□ 2.27
CSNK1D-214ENST00000580565 RANGAP1P46060 587 aaPredicted RBP29.24■■■□□ 2.27
CSNK1D-214ENST00000580565 MAGI3Q5TCQ9 1506 aa29.24■■■□□ 2.27
CSNK1D-214ENST00000580565 CFAP43Q8NDM7 1665 aa29.18■■■□□ 2.26
CSNK1D-214ENST00000580565 FHOD3Q2V2M9 1422 aa29.13■■■□□ 2.25
CSNK1D-214ENST00000580565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.13■■■□□ 2.25
CSNK1D-214ENST00000580565 HNRNPUL2Q1KMD3 747 aaKnown RBP29.13■■■□□ 2.25
CSNK1D-214ENST00000580565 RAPGEF6Q8TEU7 1601 aa29.12■■■□□ 2.25
CSNK1D-214ENST00000580565 CHIC1Q5VXU3 224 aa29.11■■■□□ 2.25
CSNK1D-214ENST00000580565 KIF21BO75037 1637 aa29.1■■■□□ 2.25
CSNK1D-214ENST00000580565 ADGRL1O94910 1474 aa29.09■■■□□ 2.25
CSNK1D-214ENST00000580565 NUP153P49790 1475 aaKnown RBP29.08■■■□□ 2.25
CSNK1D-214ENST00000580565 EFCAB5A4FU69 1503 aa29.01■■■□□ 2.23
CSNK1D-214ENST00000580565 ARAP3Q8WWN8 1544 aa29.01■■■□□ 2.23
CSNK1D-214ENST00000580565 UBTFP17480 764 aaKnown RBP29.01■■■□□ 2.23
CSNK1D-214ENST00000580565 EHMT2Q96KQ7 1210 aa29.01■■■□□ 2.23
CSNK1D-214ENST00000580565 ABCA9Q8IUA7 1624 aa29.01■■■□□ 2.23
CSNK1D-214ENST00000580565 PHLDB1Q86UU1 1377 aa29.01■■■□□ 2.23
CSNK1D-214ENST00000580565 PLEKHD1A6NEE1 506 aa28.99■■■□□ 2.23
CSNK1D-214ENST00000580565 NEO1Q92859 1461 aa28.91■■■□□ 2.22
CSNK1D-214ENST00000580565 RAPGEF3O95398 923 aa28.89■■■□□ 2.22
CSNK1D-214ENST00000580565 FMN1Q68DA7 1419 aa28.81■■■□□ 2.2
CSNK1D-214ENST00000580565 ATP1B4Q9UN42 357 aaPredicted RBP28.81■■■□□ 2.2
CSNK1D-214ENST00000580565 ARHGAP35Q9NRY4 1499 aa28.8■■■□□ 2.2
CSNK1D-214ENST00000580565 CDK13Q14004 1512 aaKnown RBP28.79■■■□□ 2.2
CSNK1D-214ENST00000580565 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.77■■■□□ 2.2
CSNK1D-214ENST00000580565 AKNAQ7Z591 1439 aa28.75■■■□□ 2.19
CSNK1D-214ENST00000580565 FANCAO15360 1455 aa28.74■■■□□ 2.19
CSNK1D-214ENST00000580565 DENND4BO75064 1496 aaPredicted RBP28.72■■■□□ 2.19
CSNK1D-214ENST00000580565 FRMPD1Q5SYB0 1578 aa28.71■■■□□ 2.19
CSNK1D-214ENST00000580565 CDK11AQ9UQ88 783 aaPredicted RBP28.7■■■□□ 2.18
CSNK1D-214ENST00000580565 TTC37Q6PGP7 1564 aa28.7■■■□□ 2.18
CSNK1D-214ENST00000580565 HECW1Q76N89 1606 aa28.68■■■□□ 2.18
CSNK1D-214ENST00000580565 PLCH2O75038 1416 aa28.65■■■□□ 2.18
CSNK1D-214ENST00000580565 ARID4BQ4LE39 1312 aaPredicted RBP28.65■■■□□ 2.18
CSNK1D-214ENST00000580565 CFAP74Q9C0B2 1584 aa28.64■■■□□ 2.18
CSNK1D-214ENST00000580565 HECW2Q9P2P5 1572 aa28.62■■■□□ 2.17
CSNK1D-214ENST00000580565 EFCAB2Q5VUJ9 269 aa28.58■■■□□ 2.17
CSNK1D-214ENST00000580565 RICTORQ6R327 1708 aa28.57■■■□□ 2.16
CSNK1D-214ENST00000580565 SCAPERQ9BY12 1400 aa28.57■■■□□ 2.16
CSNK1D-214ENST00000580565 PTPRMP28827 1452 aa28.56■■■□□ 2.16
CSNK1D-214ENST00000580565 ADAMTSL3P82987 1691 aa28.56■■■□□ 2.16
CSNK1D-214ENST00000580565 TROQ12816 1431 aaPredicted RBP28.56■■■□□ 2.16
CSNK1D-214ENST00000580565 ARHGEF40Q8TER5 1519 aa28.55■■■□□ 2.16
CSNK1D-214ENST00000580565 ZMYM4Q5VZL5 1548 aa28.53■■■□□ 2.16
CSNK1D-214ENST00000580565 CLIP1P30622 1438 aa28.52■■■□□ 2.16
CSNK1D-214ENST00000580565 MAGI2Q86UL8 1455 aa28.52■■■□□ 2.16
CSNK1D-214ENST00000580565 CASKIN1Q8WXD9 1431 aa28.52■■■□□ 2.16
CSNK1D-214ENST00000580565 POGZQ7Z3K3 1410 aa28.51■■■□□ 2.15
CSNK1D-214ENST00000580565 YEATS2Q9ULM3 1422 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms