RNA–Protein interactions for RNA: ENST00000579396.1

SCO1-204, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 2

Gene SCO1, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-204ENST00000579396 RIMBP3CA6NJZ7 1639 aa34.68■■■■□ 3.14
SCO1-204ENST00000579396 RIMBP3BA6NNM3 1639 aa34.68■■■■□ 3.14
SCO1-204ENST00000579396 RIMBP3Q9UFD9 1639 aa34.68■■■■□ 3.14
SCO1-204ENST00000579396 ARHGEF11O15085 1522 aa34.6■■■■□ 3.13
SCO1-204ENST00000579396 SHROOM2Q13796 1616 aa34.5■■■■□ 3.11
SCO1-204ENST00000579396 PRG4Q92954 1404 aaPredicted RBP34.49■■■■□ 3.11
SCO1-204ENST00000579396 KIF21BO75037 1637 aa34.48■■■■□ 3.11
SCO1-204ENST00000579396 IQGAP2Q13576 1575 aa34.45■■■■□ 3.1
SCO1-204ENST00000579396 CYB5RLQ6IPT4 315 aa34.44■■■■□ 3.1
SCO1-204ENST00000579396 UBTFP17480 764 aaKnown RBP34.4■■■■□ 3.1
SCO1-204ENST00000579396 GOLGA3Q08378 1498 aa34.37■■■■□ 3.09
SCO1-204ENST00000579396 CARMIL2Q6F5E8 1435 aa34.37■■■■□ 3.09
SCO1-204ENST00000579396 EHMT2Q96KQ7 1210 aa34.36■■■■□ 3.09
SCO1-204ENST00000579396 CTTNBP2Q8WZ74 1663 aa34.34■■■■□ 3.09
SCO1-204ENST00000579396 ARAP1Q96P48 1450 aa34.33■■■■□ 3.09
SCO1-204ENST00000579396 ERCC6L2Q5T890 1561 aa34.32■■■■□ 3.09
SCO1-204ENST00000579396 UGGT2Q9NYU1 1516 aa34.31■■■■□ 3.08
SCO1-204ENST00000579396 TNIKQ9UKE5 1360 aa34.22■■■■□ 3.07
SCO1-204ENST00000579396 DISP1Q96F81 1524 aa34.2■■■■□ 3.06
SCO1-204ENST00000579396 PTPRGP23470 1445 aa34.18■■■■□ 3.06
SCO1-204ENST00000579396 RANGAP1P46060 587 aaPredicted RBP34.14■■■■□ 3.06
SCO1-204ENST00000579396 TTBK1Q5TCY1 1321 aaPredicted RBP34.11■■■■□ 3.05
SCO1-204ENST00000579396 KIAA0556O60303 1618 aa34.08■■■■□ 3.05
SCO1-204ENST00000579396 P3H3Q8IVL6 736 aa34.07■■■■□ 3.04
SCO1-204ENST00000579396 TRHP20396 242 aaPredicted RBP34.05■■■■□ 3.04
SCO1-204ENST00000579396 LOC105371045A0A1W2PR82 267 aa33.99■■■■□ 3.03
SCO1-204ENST00000579396 NPM1P06748 294 aaKnown RBP eCLIP33.97■■■■□ 3.03
SCO1-204ENST00000579396 SAMD9Q5K651 1589 aa33.96■■■■□ 3.03
SCO1-204ENST00000579396 EFCAB5A4FU69 1503 aa33.94■■■■□ 3.02
SCO1-204ENST00000579396 UACAQ9BZF9 1416 aa33.93■■■■□ 3.02
SCO1-204ENST00000579396 UHRF1BP1LA0JNW5 1464 aa33.85■■■■□ 3.01
SCO1-204ENST00000579396 FHOD3Q2V2M9 1422 aa33.84■■■■□ 3.01
SCO1-204ENST00000579396 ARHGAP35Q9NRY4 1499 aa33.82■■■■□ 3
SCO1-204ENST00000579396 ADCY10Q96PN6 1610 aa33.79■■■■□ 3
SCO1-204ENST00000579396 CLIP1P30622 1438 aa33.79■■■■□ 3
SCO1-204ENST00000579396 PLB1Q6P1J6 1458 aa33.78■■■■□ 3
SCO1-204ENST00000579396 ABCC2Q92887 1545 aa33.77■■■■□ 3
SCO1-204ENST00000579396 ABCA8O94911 1581 aa33.73■■■□□ 2.99
SCO1-204ENST00000579396 FMN1Q68DA7 1419 aa33.71■■■□□ 2.99
SCO1-204ENST00000579396 CEP162Q5TB80 1403 aa33.68■■■□□ 2.98
SCO1-204ENST00000579396 KDM5BQ9UGL1 1544 aa33.66■■■□□ 2.98
SCO1-204ENST00000579396 RAPGEF6Q8TEU7 1601 aa33.61■■■□□ 2.97
SCO1-204ENST00000579396 MAPKBP1O60336 1514 aa33.58■■■□□ 2.97
SCO1-204ENST00000579396 ATP1B4Q9UN42 357 aaPredicted RBP33.57■■■□□ 2.96
SCO1-204ENST00000579396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.55■■■□□ 2.96
SCO1-204ENST00000579396 HNRNPUL2Q1KMD3 747 aaKnown RBP33.55■■■□□ 2.96
SCO1-204ENST00000579396 ARID3CA6NKF2 412 aa33.54■■■□□ 2.96
SCO1-204ENST00000579396 ATP10BO94823 1461 aa33.54■■■□□ 2.96
SCO1-204ENST00000579396 ASXL2Q76L83 1435 aa33.51■■■□□ 2.95
SCO1-204ENST00000579396 NUP153P49790 1475 aaKnown RBP33.5■■■□□ 2.95
SCO1-204ENST00000579396 ZCCHC11Q5TAX3 1644 aaKnown RBP33.5■■■□□ 2.95
SCO1-204ENST00000579396 CASKIN1Q8WXD9 1431 aa33.45■■■□□ 2.95
SCO1-204ENST00000579396 FAM69CQ0P6D2 419 aa33.45■■■□□ 2.95
SCO1-204ENST00000579396 ABCC10Q5T3U5 1492 aa33.44■■■□□ 2.94
SCO1-204ENST00000579396 PLEKHD1A6NEE1 506 aa33.43■■■□□ 2.94
SCO1-204ENST00000579396 CDK11AQ9UQ88 783 aaPredicted RBP33.39■■■□□ 2.94
SCO1-204ENST00000579396 HECW1Q76N89 1606 aa33.39■■■□□ 2.93
SCO1-204ENST00000579396 WDR7Q9Y4E6 1490 aa33.37■■■□□ 2.93
SCO1-204ENST00000579396 KCNH8Q96L42 1107 aa33.37■■■□□ 2.93
SCO1-204ENST00000579396 EPRSP07814 1512 aaKnown RBP33.35■■■□□ 2.93
SCO1-204ENST00000579396 FYCO1Q9BQS8 1478 aa33.34■■■□□ 2.93
SCO1-204ENST00000579396 PCF11O94913 1555 aaKnown RBP33.29■■■□□ 2.92
SCO1-204ENST00000579396 DIP2BQ9P265 1576 aa33.27■■■□□ 2.92
SCO1-204ENST00000579396 CCDC18Q5T9S5 1454 aa33.27■■■□□ 2.92
SCO1-204ENST00000579396 VPS8Q8N3P4 1428 aa33.27■■■□□ 2.92
SCO1-204ENST00000579396 CDK13Q14004 1512 aaKnown RBP33.26■■■□□ 2.91
SCO1-204ENST00000579396 GLI2P10070 1586 aa33.25■■■□□ 2.91
SCO1-204ENST00000579396 KIF13AQ9H1H9 1805 aa33.21■■■□□ 2.91
SCO1-204ENST00000579396 TROQ12816 1431 aaPredicted RBP33.11■■■□□ 2.89
SCO1-204ENST00000579396 CD109Q6YHK3 1445 aa33.11■■■□□ 2.89
SCO1-204ENST00000579396 LRRIQ1Q96JM4 1722 aa33.11■■■□□ 2.89
SCO1-204ENST00000579396 APLP2Q06481 763 aa33.09■■■□□ 2.89
SCO1-204ENST00000579396 AEBP2Q6ZN18 517 aaPredicted RBP33.04■■■□□ 2.88
SCO1-204ENST00000579396 MAP3K4Q9Y6R4 1608 aa33.03■■■□□ 2.88
SCO1-204ENST00000579396 MTUS2Q5JR59 1369 aa33.03■■■□□ 2.88
SCO1-204ENST00000579396 ABCA9Q8IUA7 1624 aa33.01■■■□□ 2.87
SCO1-204ENST00000579396 CFAP43Q8NDM7 1665 aa33.01■■■□□ 2.87
SCO1-204ENST00000579396 TEX14Q8IWB6 1497 aa32.99■■■□□ 2.87
SCO1-204ENST00000579396 MAGI3Q5TCQ9 1506 aa32.98■■■□□ 2.87
SCO1-204ENST00000579396 MAP3K1Q13233 1512 aa32.97■■■□□ 2.87
SCO1-204ENST00000579396 TSPOAP1O95153 1857 aa32.97■■■□□ 2.87
SCO1-204ENST00000579396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.96■■■□□ 2.87
SCO1-204ENST00000579396 KIF14Q15058 1648 aa32.92■■■□□ 2.86
SCO1-204ENST00000579396 TIAM1Q13009 1591 aa32.91■■■□□ 2.86
SCO1-204ENST00000579396 PHLDB1Q86UU1 1377 aa32.89■■■□□ 2.86
SCO1-204ENST00000579396 PLCH2O75038 1416 aa32.87■■■□□ 2.85
SCO1-204ENST00000579396 PPRC1Q5VV67 1664 aaKnown RBP32.86■■■□□ 2.85
SCO1-204ENST00000579396 EFCAB2Q5VUJ9 269 aa32.85■■■□□ 2.85
SCO1-204ENST00000579396 EHBP1L1Q8N3D4 1523 aa32.85■■■□□ 2.85
SCO1-204ENST00000579396 KANK4Q5T7N3 995 aaPredicted RBP32.84■■■□□ 2.85
SCO1-204ENST00000579396 LRRC9Q6ZRR7 1453 aa32.84■■■□□ 2.85
SCO1-204ENST00000579396 TTC37Q6PGP7 1564 aa32.83■■■□□ 2.85
SCO1-204ENST00000579396 NEO1Q92859 1461 aa32.8■■■□□ 2.84
SCO1-204ENST00000579396 CCNB3Q8WWL7 1395 aa32.78■■■□□ 2.84
SCO1-204ENST00000579396 FANCAO15360 1455 aa32.76■■■□□ 2.84
SCO1-204ENST00000579396 ARAP3Q8WWN8 1544 aa32.76■■■□□ 2.83
SCO1-204ENST00000579396 AKNAQ7Z591 1439 aa32.73■■■□□ 2.83
SCO1-204ENST00000579396 MYO5CQ9NQX4 1742 aa32.71■■■□□ 2.83
SCO1-204ENST00000579396 CFDP1Q9UEE9 299 aaPredicted RBP32.71■■■□□ 2.83
SCO1-204ENST00000579396 GPATCH8Q9UKJ3 1502 aaKnown RBP32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms