RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 ERCC6L2Q5T890 1561 aa29.4■■■□□ 2.3
ITGB4-205ENST00000579211 KIAA0586Q9BVV6 1533 aa29.37■■■□□ 2.29
ITGB4-205ENST00000579211 PRG4Q92954 1404 aaPredicted RBP29.37■■■□□ 2.29
ITGB4-205ENST00000579211 RAPGEF2Q9Y4G8 1499 aa29.36■■■□□ 2.29
ITGB4-205ENST00000579211 IQGAP2Q13576 1575 aa29.26■■■□□ 2.27
ITGB4-205ENST00000579211 CTTNBP2Q8WZ74 1663 aa29.24■■■□□ 2.27
ITGB4-205ENST00000579211 CHIC1Q5VXU3 224 aa29.23■■■□□ 2.27
ITGB4-205ENST00000579211 CSRNP3Q8WYN3 585 aa29.19■■■□□ 2.26
ITGB4-205ENST00000579211 EEA1Q15075 1411 aa29.18■■■□□ 2.26
ITGB4-205ENST00000579211 FAM9AQ8IZU1 332 aaPredicted RBP29.17■■■□□ 2.26
ITGB4-205ENST00000579211 TRHP20396 242 aaPredicted RBP29.15■■■□□ 2.26
ITGB4-205ENST00000579211 CARMIL2Q6F5E8 1435 aa29.14■■■□□ 2.26
ITGB4-205ENST00000579211 PRXQ9BXM0 1461 aa29.14■■■□□ 2.26
ITGB4-205ENST00000579211 TTBK1Q5TCY1 1321 aaPredicted RBP29.1■■■□□ 2.25
ITGB4-205ENST00000579211 UGGT2Q9NYU1 1516 aa29.01■■■□□ 2.23
ITGB4-205ENST00000579211 NPM1P06748 294 aaKnown RBP eCLIP29.01■■■□□ 2.23
ITGB4-205ENST00000579211 PTPRGP23470 1445 aa29.01■■■□□ 2.23
ITGB4-205ENST00000579211 TNIKQ9UKE5 1360 aa29■■■□□ 2.23
ITGB4-205ENST00000579211 DISP1Q96F81 1524 aa28.96■■■□□ 2.23
ITGB4-205ENST00000579211 KIAA0556O60303 1618 aa28.95■■■□□ 2.23
ITGB4-205ENST00000579211 ADCY10Q96PN6 1610 aa28.94■■■□□ 2.22
ITGB4-205ENST00000579211 GOLGA3Q08378 1498 aa28.93■■■□□ 2.22
ITGB4-205ENST00000579211 KIF21BO75037 1637 aa28.91■■■□□ 2.22
ITGB4-205ENST00000579211 EHMT2Q96KQ7 1210 aa28.85■■■□□ 2.21
ITGB4-205ENST00000579211 RANGAP1P46060 587 aaPredicted RBP28.82■■■□□ 2.2
ITGB4-205ENST00000579211 UACAQ9BZF9 1416 aa28.79■■■□□ 2.2
ITGB4-205ENST00000579211 KIF13AQ9H1H9 1805 aa28.78■■■□□ 2.2
ITGB4-205ENST00000579211 UBTFP17480 764 aaKnown RBP28.78■■■□□ 2.2
ITGB4-205ENST00000579211 P3H3Q8IVL6 736 aa28.77■■■□□ 2.2
ITGB4-205ENST00000579211 MAPKBP1O60336 1514 aa28.74■■■□□ 2.19
ITGB4-205ENST00000579211 ABCC2Q92887 1545 aa28.74■■■□□ 2.19
ITGB4-205ENST00000579211 UHRF1BP1LA0JNW5 1464 aa28.73■■■□□ 2.19
ITGB4-205ENST00000579211 SAMD9Q5K651 1589 aa28.71■■■□□ 2.19
ITGB4-205ENST00000579211 ZCCHC11Q5TAX3 1644 aaKnown RBP28.65■■■□□ 2.18
ITGB4-205ENST00000579211 FAM69CQ0P6D2 419 aa28.65■■■□□ 2.18
ITGB4-205ENST00000579211 PLB1Q6P1J6 1458 aa28.65■■■□□ 2.18
ITGB4-205ENST00000579211 ABCC10Q5T3U5 1492 aa28.62■■■□□ 2.17
ITGB4-205ENST00000579211 ABCA8O94911 1581 aa28.61■■■□□ 2.17
ITGB4-205ENST00000579211 DIP2BQ9P265 1576 aa28.61■■■□□ 2.17
ITGB4-205ENST00000579211 TSPOAP1O95153 1857 aa28.61■■■□□ 2.17
ITGB4-205ENST00000579211 KDM5BQ9UGL1 1544 aa28.59■■■□□ 2.17
ITGB4-205ENST00000579211 EFCAB5A4FU69 1503 aa28.58■■■□□ 2.17
ITGB4-205ENST00000579211 ASXL2Q76L83 1435 aa28.57■■■□□ 2.16
ITGB4-205ENST00000579211 FHOD3Q2V2M9 1422 aa28.53■■■□□ 2.16
ITGB4-205ENST00000579211 RAPGEF6Q8TEU7 1601 aa28.52■■■□□ 2.16
ITGB4-205ENST00000579211 ARID3CA6NKF2 412 aa28.49■■■□□ 2.15
ITGB4-205ENST00000579211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.44■■■□□ 2.14
ITGB4-205ENST00000579211 HNRNPUL2Q1KMD3 747 aaKnown RBP28.44■■■□□ 2.14
ITGB4-205ENST00000579211 GLI2P10070 1586 aa28.41■■■□□ 2.14
ITGB4-205ENST00000579211 WDR7Q9Y4E6 1490 aa28.4■■■□□ 2.14
ITGB4-205ENST00000579211 KCNH8Q96L42 1107 aa28.4■■■□□ 2.14
ITGB4-205ENST00000579211 EPRSP07814 1512 aaKnown RBP28.39■■■□□ 2.14
ITGB4-205ENST00000579211 ATP10BO94823 1461 aa28.37■■■□□ 2.13
ITGB4-205ENST00000579211 ARHGAP35Q9NRY4 1499 aa28.36■■■□□ 2.13
ITGB4-205ENST00000579211 ATP1B4Q9UN42 357 aaPredicted RBP28.34■■■□□ 2.13
ITGB4-205ENST00000579211 MAP3K4Q9Y6R4 1608 aa28.32■■■□□ 2.12
ITGB4-205ENST00000579211 FMN1Q68DA7 1419 aa28.32■■■□□ 2.12
ITGB4-205ENST00000579211 NUP153P49790 1475 aaKnown RBP28.31■■■□□ 2.12
ITGB4-205ENST00000579211 CFAP43Q8NDM7 1665 aa28.29■■■□□ 2.12
ITGB4-205ENST00000579211 PPRC1Q5VV67 1664 aaKnown RBP28.29■■■□□ 2.12
ITGB4-205ENST00000579211 KDM6BO15054 1643 aa28.26■■■□□ 2.11
ITGB4-205ENST00000579211 HECW1Q76N89 1606 aa28.25■■■□□ 2.11
ITGB4-205ENST00000579211 TEX14Q8IWB6 1497 aa28.22■■■□□ 2.11
ITGB4-205ENST00000579211 PLEKHD1A6NEE1 506 aa28.22■■■□□ 2.11
ITGB4-205ENST00000579211 CLIP1P30622 1438 aa28.21■■■□□ 2.11
ITGB4-205ENST00000579211 CD109Q6YHK3 1445 aa28.19■■■□□ 2.1
ITGB4-205ENST00000579211 CDK13Q14004 1512 aaKnown RBP28.15■■■□□ 2.1
ITGB4-205ENST00000579211 ABCA9Q8IUA7 1624 aa28.13■■■□□ 2.09
ITGB4-205ENST00000579211 LRRIQ1Q96JM4 1722 aa28.12■■■□□ 2.09
ITGB4-205ENST00000579211 CDK11AQ9UQ88 783 aaPredicted RBP28.1■■■□□ 2.09
ITGB4-205ENST00000579211 MAGI3Q5TCQ9 1506 aa28.09■■■□□ 2.09
ITGB4-205ENST00000579211 LOC105371045A0A1W2PR82 267 aa28.09■■■□□ 2.09
ITGB4-205ENST00000579211 PCF11O94913 1555 aaKnown RBP28.08■■■□□ 2.09
ITGB4-205ENST00000579211 CASKIN1Q8WXD9 1431 aa28.05■■■□□ 2.08
ITGB4-205ENST00000579211 CEP162Q5TB80 1403 aa28.03■■■□□ 2.08
ITGB4-205ENST00000579211 CCDC18Q5T9S5 1454 aa28■■■□□ 2.07
ITGB4-205ENST00000579211 FYCO1Q9BQS8 1478 aa27.99■■■□□ 2.07
ITGB4-205ENST00000579211 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.97■■■□□ 2.07
ITGB4-205ENST00000579211 TTC37Q6PGP7 1564 aa27.94■■■□□ 2.06
ITGB4-205ENST00000579211 KIF14Q15058 1648 aa27.93■■■□□ 2.06
ITGB4-205ENST00000579211 COL17A1Q9UMD9 1497 aaPredicted RBP27.93■■■□□ 2.06
ITGB4-205ENST00000579211 MYO5CQ9NQX4 1742 aa27.92■■■□□ 2.06
ITGB4-205ENST00000579211 CFAP74Q9C0B2 1584 aa27.91■■■□□ 2.06
ITGB4-205ENST00000579211 PHLDB1Q86UU1 1377 aa27.9■■■□□ 2.06
ITGB4-205ENST00000579211 TROQ12816 1431 aaPredicted RBP27.9■■■□□ 2.06
ITGB4-205ENST00000579211 NEO1Q92859 1461 aa27.89■■■□□ 2.05
ITGB4-205ENST00000579211 ARAP3Q8WWN8 1544 aa27.86■■■□□ 2.05
ITGB4-205ENST00000579211 FANCAO15360 1455 aa27.83■■■□□ 2.05
ITGB4-205ENST00000579211 AEBP2Q6ZN18 517 aaPredicted RBP27.81■■■□□ 2.04
ITGB4-205ENST00000579211 PLCH2O75038 1416 aa27.79■■■□□ 2.04
ITGB4-205ENST00000579211 AKNAQ7Z591 1439 aa27.79■■■□□ 2.04
ITGB4-205ENST00000579211 RAPGEF3O95398 923 aa27.75■■■□□ 2.03
ITGB4-205ENST00000579211 EFCAB2Q5VUJ9 269 aa27.75■■■□□ 2.03
ITGB4-205ENST00000579211 CDC42BPBQ9Y5S2 1711 aa27.75■■■□□ 2.03
ITGB4-205ENST00000579211 ARHGAP5Q13017 1502 aa27.74■■■□□ 2.03
ITGB4-205ENST00000579211 MTUS2Q5JR59 1369 aa27.73■■■□□ 2.03
ITGB4-205ENST00000579211 DENND4BO75064 1496 aaPredicted RBP27.72■■■□□ 2.03
ITGB4-205ENST00000579211 CDC42BPAQ5VT25 1732 aa27.72■■■□□ 2.03
ITGB4-205ENST00000579211 RICTORQ6R327 1708 aa27.71■■■□□ 2.03
ITGB4-205ENST00000579211 VPS8Q8N3P4 1428 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms