RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
CSNK1D-208ENST00000578501 KIF13AQ9H1H9 1805 aa23.14■■□□□ 1.29
CSNK1D-208ENST00000578501 NPM1P06748 294 aaKnown RBP eCLIP23.13■■□□□ 1.29
CSNK1D-208ENST00000578501 JPH4Q96JJ6 628 aa23.13■■□□□ 1.29
CSNK1D-208ENST00000578501 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
CSNK1D-208ENST00000578501 PRG4Q92954 1404 aaPredicted RBP23.12■■□□□ 1.29
CSNK1D-208ENST00000578501 FAM69CQ0P6D2 419 aa23.11■■□□□ 1.29
CSNK1D-208ENST00000578501 KIAA0586Q9BVV6 1533 aa23.11■■□□□ 1.29
CSNK1D-208ENST00000578501 ABCC10Q5T3U5 1492 aa23.07■■□□□ 1.28
CSNK1D-208ENST00000578501 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
CSNK1D-208ENST00000578501 MAPKBP1O60336 1514 aa23■■□□□ 1.27
CSNK1D-208ENST00000578501 KDM4FA0A1W2PPD8 638 aa22.95■■□□□ 1.26
CSNK1D-208ENST00000578501 PRXQ9BXM0 1461 aa22.95■■□□□ 1.26
CSNK1D-208ENST00000578501 DIP2BQ9P265 1576 aa22.93■■□□□ 1.26
CSNK1D-208ENST00000578501 IQGAP2Q13576 1575 aa22.93■■□□□ 1.26
CSNK1D-208ENST00000578501 EEA1Q15075 1411 aa22.92■■□□□ 1.26
CSNK1D-208ENST00000578501 KDM6BO15054 1643 aa22.91■■□□□ 1.26
CSNK1D-208ENST00000578501 CHIC1Q5VXU3 224 aa22.9■■□□□ 1.26
CSNK1D-208ENST00000578501 CSRNP3Q8WYN3 585 aa22.9■■□□□ 1.26
CSNK1D-208ENST00000578501 CARMIL2Q6F5E8 1435 aa22.86■■□□□ 1.25
CSNK1D-208ENST00000578501 ILDR1Q86SU0 546 aaPredicted RBP22.85■■□□□ 1.25
CSNK1D-208ENST00000578501 ADCY10Q96PN6 1610 aa22.85■■□□□ 1.25
CSNK1D-208ENST00000578501 UGGT2Q9NYU1 1516 aa22.82■■□□□ 1.24
CSNK1D-208ENST00000578501 TNIKQ9UKE5 1360 aa22.8■■□□□ 1.24
CSNK1D-208ENST00000578501 DISP1Q96F81 1524 aa22.79■■□□□ 1.24
CSNK1D-208ENST00000578501 PTPRGP23470 1445 aa22.79■■□□□ 1.24
CSNK1D-208ENST00000578501 CTTNBP2Q8WZ74 1663 aa22.77■■□□□ 1.24
CSNK1D-208ENST00000578501 TSPOAP1O95153 1857 aa22.75■■□□□ 1.23
CSNK1D-208ENST00000578501 FAM9AQ8IZU1 332 aaPredicted RBP22.7■■□□□ 1.22
CSNK1D-208ENST00000578501 KIAA0556O60303 1618 aa22.7■■□□□ 1.22
CSNK1D-208ENST00000578501 GOLGA3Q08378 1498 aa22.69■■□□□ 1.22
CSNK1D-208ENST00000578501 PLB1Q6P1J6 1458 aa22.66■■□□□ 1.22
CSNK1D-208ENST00000578501 UHRF1BP1LA0JNW5 1464 aa22.65■■□□□ 1.22
CSNK1D-208ENST00000578501 KIF21BO75037 1637 aa22.64■■□□□ 1.22
CSNK1D-208ENST00000578501 ABCC2Q92887 1545 aa22.64■■□□□ 1.21
CSNK1D-208ENST00000578501 UACAQ9BZF9 1416 aa22.64■■□□□ 1.21
CSNK1D-208ENST00000578501 TTBK1Q5TCY1 1321 aaPredicted RBP22.63■■□□□ 1.21
CSNK1D-208ENST00000578501 ADGRL1O94910 1474 aa22.62■■□□□ 1.21
CSNK1D-208ENST00000578501 GLI2P10070 1586 aa22.62■■□□□ 1.21
CSNK1D-208ENST00000578501 ASXL2Q76L83 1435 aa22.61■■□□□ 1.21
CSNK1D-208ENST00000578501 PPRC1Q5VV67 1664 aaKnown RBP22.52■■□□□ 1.2
CSNK1D-208ENST00000578501 KDM5BQ9UGL1 1544 aa22.52■■□□□ 1.2
CSNK1D-208ENST00000578501 SAMD9Q5K651 1589 aa22.52■■□□□ 1.2
CSNK1D-208ENST00000578501 TEX14Q8IWB6 1497 aa22.51■■□□□ 1.19
CSNK1D-208ENST00000578501 ABCA8O94911 1581 aa22.48■■□□□ 1.19
CSNK1D-208ENST00000578501 COL17A1Q9UMD9 1497 aaPredicted RBP22.47■■□□□ 1.19
CSNK1D-208ENST00000578501 P3H3Q8IVL6 736 aa22.47■■□□□ 1.19
CSNK1D-208ENST00000578501 EPRSP07814 1512 aaKnown RBP22.47■■□□□ 1.19
CSNK1D-208ENST00000578501 HECW2Q9P2P5 1572 aa22.46■■□□□ 1.19
CSNK1D-208ENST00000578501 UBTFP17480 764 aaKnown RBP22.45■■□□□ 1.18
CSNK1D-208ENST00000578501 MAP3K4Q9Y6R4 1608 aa22.42■■□□□ 1.18
CSNK1D-208ENST00000578501 ZCCHC11Q5TAX3 1644 aaKnown RBP22.42■■□□□ 1.18
CSNK1D-208ENST00000578501 EFCAB5A4FU69 1503 aa22.41■■□□□ 1.18
CSNK1D-208ENST00000578501 RANGAP1P46060 587 aaPredicted RBP22.39■■□□□ 1.17
CSNK1D-208ENST00000578501 EHMT2Q96KQ7 1210 aa22.37■■□□□ 1.17
CSNK1D-208ENST00000578501 FHOD3Q2V2M9 1422 aa22.36■■□□□ 1.17
CSNK1D-208ENST00000578501 WDR7Q9Y4E6 1490 aa22.33■■□□□ 1.16
CSNK1D-208ENST00000578501 RAPGEF6Q8TEU7 1601 aa22.31■■□□□ 1.16
CSNK1D-208ENST00000578501 ATP10BO94823 1461 aa22.31■■□□□ 1.16
CSNK1D-208ENST00000578501 FBXO41Q8TF61 875 aa22.28■■□□□ 1.16
CSNK1D-208ENST00000578501 ARHGAP35Q9NRY4 1499 aa22.27■■□□□ 1.16
CSNK1D-208ENST00000578501 CD109Q6YHK3 1445 aa22.26■■□□□ 1.15
CSNK1D-208ENST00000578501 NUP153P49790 1475 aaKnown RBP22.26■■□□□ 1.15
CSNK1D-208ENST00000578501 MAGI3Q5TCQ9 1506 aa22.25■■□□□ 1.15
CSNK1D-208ENST00000578501 FMN1Q68DA7 1419 aa22.23■■□□□ 1.15
CSNK1D-208ENST00000578501 ARID3CA6NKF2 412 aa22.22■■□□□ 1.15
CSNK1D-208ENST00000578501 KCNH8Q96L42 1107 aa22.2■■□□□ 1.14
CSNK1D-208ENST00000578501 CFAP43Q8NDM7 1665 aa22.19■■□□□ 1.14
CSNK1D-208ENST00000578501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.16■■□□□ 1.14
CSNK1D-208ENST00000578501 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
CSNK1D-208ENST00000578501 PLEKHD1A6NEE1 506 aa22.11■■□□□ 1.13
CSNK1D-208ENST00000578501 ARAP3Q8WWN8 1544 aa22.1■■□□□ 1.13
CSNK1D-208ENST00000578501 CLIP1P30622 1438 aa22.09■■□□□ 1.13
CSNK1D-208ENST00000578501 HECW1Q76N89 1606 aa22.08■■□□□ 1.13
CSNK1D-208ENST00000578501 PHLDB1Q86UU1 1377 aa22.08■■□□□ 1.12
CSNK1D-208ENST00000578501 ABCA9Q8IUA7 1624 aa22.07■■□□□ 1.12
CSNK1D-208ENST00000578501 CDK13Q14004 1512 aaKnown RBP22.05■■□□□ 1.12
CSNK1D-208ENST00000578501 PTPRMP28827 1452 aa22.04■■□□□ 1.12
CSNK1D-208ENST00000578501 ATP1B4Q9UN42 357 aaPredicted RBP22.04■■□□□ 1.12
CSNK1D-208ENST00000578501 CASKIN1Q8WXD9 1431 aa22.03■■□□□ 1.12
CSNK1D-208ENST00000578501 CDK11AQ9UQ88 783 aaPredicted RBP22.01■■□□□ 1.11
CSNK1D-208ENST00000578501 ADAMTSL3P82987 1691 aa21.98■■□□□ 1.11
CSNK1D-208ENST00000578501 PCF11O94913 1555 aaKnown RBP21.96■■□□□ 1.11
CSNK1D-208ENST00000578501 CEP162Q5TB80 1403 aa21.96■■□□□ 1.11
CSNK1D-208ENST00000578501 CCDC18Q5T9S5 1454 aa21.96■■□□□ 1.11
CSNK1D-208ENST00000578501 FYCO1Q9BQS8 1478 aa21.96■■□□□ 1.11
CSNK1D-208ENST00000578501 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.11
CSNK1D-208ENST00000578501 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
CSNK1D-208ENST00000578501 RAPGEF3O95398 923 aa21.94■■□□□ 1.1
CSNK1D-208ENST00000578501 ARID4BQ4LE39 1312 aaPredicted RBP21.94■■□□□ 1.1
CSNK1D-208ENST00000578501 NEO1Q92859 1461 aa21.94■■□□□ 1.1
CSNK1D-208ENST00000578501 LRRIQ1Q96JM4 1722 aa21.92■■□□□ 1.1
CSNK1D-208ENST00000578501 TROQ12816 1431 aaPredicted RBP21.92■■□□□ 1.1
CSNK1D-208ENST00000578501 TTC37Q6PGP7 1564 aa21.89■■□□□ 1.09
CSNK1D-208ENST00000578501 BCORL1Q5H9F3 1711 aa21.87■■□□□ 1.09
CSNK1D-208ENST00000578501 LMTK3Q96Q04 1460 aa21.87■■□□□ 1.09
CSNK1D-208ENST00000578501 PLCH2O75038 1416 aa21.86■■□□□ 1.09
CSNK1D-208ENST00000578501 KIF14Q15058 1648 aa21.85■■□□□ 1.09
CSNK1D-208ENST00000578501 FANCAO15360 1455 aa21.84■■□□□ 1.09
CSNK1D-208ENST00000578501 MADDQ8WXG6 1647 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms