RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 PRXQ9BXM0 1461 aa20.51■□□□□ 0.87
RARA-208ENST00000577646 CEP170Q5SW79 1584 aa20.46■□□□□ 0.87
RARA-208ENST00000577646 KIAA0586Q9BVV6 1533 aa20.46■□□□□ 0.87
RARA-208ENST00000577646 ARAP1Q96P48 1450 aa20.44■□□□□ 0.86
RARA-208ENST00000577646 TRHP20396 242 aaPredicted RBP20.42■□□□□ 0.86
RARA-208ENST00000577646 FAM9AQ8IZU1 332 aaPredicted RBP20.39■□□□□ 0.85
RARA-208ENST00000577646 JPH4Q96JJ6 628 aa20.39■□□□□ 0.85
RARA-208ENST00000577646 KIF21BO75037 1637 aa20.37■□□□□ 0.85
RARA-208ENST00000577646 SHROOM2Q13796 1616 aa20.36■□□□□ 0.85
RARA-208ENST00000577646 IQGAP2Q13576 1575 aa20.31■□□□□ 0.84
RARA-208ENST00000577646 PRG4Q92954 1404 aaPredicted RBP20.28■□□□□ 0.84
RARA-208ENST00000577646 CARMIL2Q6F5E8 1435 aa20.27■□□□□ 0.83
RARA-208ENST00000577646 CTTNBP2Q8WZ74 1663 aa20.26■□□□□ 0.83
RARA-208ENST00000577646 GOLGA3Q08378 1498 aa20.26■□□□□ 0.83
RARA-208ENST00000577646 UGGT2Q9NYU1 1516 aa20.25■□□□□ 0.83
RARA-208ENST00000577646 ERCC6L2Q5T890 1561 aa20.21■□□□□ 0.83
RARA-208ENST00000577646 UBTFP17480 764 aaKnown RBP20.19■□□□□ 0.82
RARA-208ENST00000577646 TNIKQ9UKE5 1360 aa20.15■□□□□ 0.82
RARA-208ENST00000577646 DISP1Q96F81 1524 aa20.13■□□□□ 0.81
RARA-208ENST00000577646 PTPRGP23470 1445 aa20.1■□□□□ 0.81
RARA-208ENST00000577646 KIAA0556O60303 1618 aa20.09■□□□□ 0.81
RARA-208ENST00000577646 AEBP2Q6ZN18 517 aaPredicted RBP20.07■□□□□ 0.8
RARA-208ENST00000577646 EFCAB5A4FU69 1503 aa20.07■□□□□ 0.8
RARA-208ENST00000577646 SAMD9Q5K651 1589 aa20.04■□□□□ 0.8
RARA-208ENST00000577646 NPM1P06748 294 aaKnown RBP eCLIP20.03■□□□□ 0.8
RARA-208ENST00000577646 EHMT2Q96KQ7 1210 aa20.01■□□□□ 0.79
RARA-208ENST00000577646 UHRF1BP1LA0JNW5 1464 aa19.99■□□□□ 0.79
RARA-208ENST00000577646 UACAQ9BZF9 1416 aa19.97■□□□□ 0.79
RARA-208ENST00000577646 TTBK1Q5TCY1 1321 aaPredicted RBP19.97■□□□□ 0.79
RARA-208ENST00000577646 P3H3Q8IVL6 736 aa19.93■□□□□ 0.78
RARA-208ENST00000577646 RANGAP1P46060 587 aaPredicted RBP19.92■□□□□ 0.78
RARA-208ENST00000577646 ARHGAP35Q9NRY4 1499 aa19.92■□□□□ 0.78
RARA-208ENST00000577646 ABCC2Q92887 1545 aa19.91■□□□□ 0.78
RARA-208ENST00000577646 LOC105371045A0A1W2PR82 267 aa19.9■□□□□ 0.78
RARA-208ENST00000577646 CLIP1P30622 1438 aa19.9■□□□□ 0.78
RARA-208ENST00000577646 FMN1Q68DA7 1419 aa19.9■□□□□ 0.78
RARA-208ENST00000577646 ADCY10Q96PN6 1610 aa19.88■□□□□ 0.77
RARA-208ENST00000577646 ABCA8O94911 1581 aa19.88■□□□□ 0.77
RARA-208ENST00000577646 FHOD3Q2V2M9 1422 aa19.88■□□□□ 0.77
RARA-208ENST00000577646 KDM5BQ9UGL1 1544 aa19.85■□□□□ 0.77
RARA-208ENST00000577646 PLB1Q6P1J6 1458 aa19.85■□□□□ 0.77
RARA-208ENST00000577646 FAM69CQ0P6D2 419 aa19.83■□□□□ 0.77
RARA-208ENST00000577646 CEP162Q5TB80 1403 aa19.83■□□□□ 0.76
RARA-208ENST00000577646 MAPKBP1O60336 1514 aa19.82■□□□□ 0.76
RARA-208ENST00000577646 RAPGEF6Q8TEU7 1601 aa19.8■□□□□ 0.76
RARA-208ENST00000577646 ABCC10Q5T3U5 1492 aa19.79■□□□□ 0.76
RARA-208ENST00000577646 KIF13AQ9H1H9 1805 aa19.75■□□□□ 0.75
RARA-208ENST00000577646 ATP10BO94823 1461 aa19.73■□□□□ 0.75
RARA-208ENST00000577646 CASKIN1Q8WXD9 1431 aa19.73■□□□□ 0.75
RARA-208ENST00000577646 NUP153P49790 1475 aaKnown RBP19.73■□□□□ 0.75
RARA-208ENST00000577646 ZCCHC11Q5TAX3 1644 aaKnown RBP19.73■□□□□ 0.75
RARA-208ENST00000577646 DIP2BQ9P265 1576 aa19.71■□□□□ 0.75
RARA-208ENST00000577646 HECW1Q76N89 1606 aa19.71■□□□□ 0.75
RARA-208ENST00000577646 ASXL2Q76L83 1435 aa19.7■□□□□ 0.74
RARA-208ENST00000577646 FYCO1Q9BQS8 1478 aa19.69■□□□□ 0.74
RARA-208ENST00000577646 CDK11AQ9UQ88 783 aaPredicted RBP19.69■□□□□ 0.74
RARA-208ENST00000577646 PLEKHD1A6NEE1 506 aa19.66■□□□□ 0.74
RARA-208ENST00000577646 WDR7Q9Y4E6 1490 aa19.66■□□□□ 0.74
RARA-208ENST00000577646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.65■□□□□ 0.74
RARA-208ENST00000577646 HNRNPUL2Q1KMD3 747 aaKnown RBP19.65■□□□□ 0.74
RARA-208ENST00000577646 CCDC18Q5T9S5 1454 aa19.65■□□□□ 0.74
RARA-208ENST00000577646 EPRSP07814 1512 aaKnown RBP19.65■□□□□ 0.74
RARA-208ENST00000577646 ATP1B4Q9UN42 357 aaPredicted RBP19.64■□□□□ 0.73
RARA-208ENST00000577646 GLI2P10070 1586 aa19.62■□□□□ 0.73
RARA-208ENST00000577646 VPS8Q8N3P4 1428 aa19.62■□□□□ 0.73
RARA-208ENST00000577646 PCF11O94913 1555 aaKnown RBP19.6■□□□□ 0.73
RARA-208ENST00000577646 ARID3CA6NKF2 412 aa19.58■□□□□ 0.72
RARA-208ENST00000577646 TSPOAP1O95153 1857 aa19.56■□□□□ 0.72
RARA-208ENST00000577646 CDK13Q14004 1512 aaKnown RBP19.55■□□□□ 0.72
RARA-208ENST00000577646 KCNH8Q96L42 1107 aa19.54■□□□□ 0.72
RARA-208ENST00000577646 TROQ12816 1431 aaPredicted RBP19.51■□□□□ 0.71
RARA-208ENST00000577646 MAP3K1Q13233 1512 aa19.51■□□□□ 0.71
RARA-208ENST00000577646 KDM6BO15054 1643 aa19.5■□□□□ 0.71
RARA-208ENST00000577646 CFAP43Q8NDM7 1665 aa19.49■□□□□ 0.71
RARA-208ENST00000577646 LRRIQ1Q96JM4 1722 aa19.48■□□□□ 0.71
RARA-208ENST00000577646 ABCA9Q8IUA7 1624 aa19.47■□□□□ 0.71
RARA-208ENST00000577646 MAP3K4Q9Y6R4 1608 aa19.47■□□□□ 0.71
RARA-208ENST00000577646 APLP2Q06481 763 aa19.47■□□□□ 0.71
RARA-208ENST00000577646 CD109Q6YHK3 1445 aa19.47■□□□□ 0.71
RARA-208ENST00000577646 TEX14Q8IWB6 1497 aa19.47■□□□□ 0.71
RARA-208ENST00000577646 MAGI3Q5TCQ9 1506 aa19.46■□□□□ 0.71
RARA-208ENST00000577646 PHLDB1Q86UU1 1377 aa19.44■□□□□ 0.7
RARA-208ENST00000577646 KDM4FA0A1W2PPD8 638 aa19.44■□□□□ 0.7
RARA-208ENST00000577646 MTUS2Q5JR59 1369 aa19.44■□□□□ 0.7
RARA-208ENST00000577646 KIF14Q15058 1648 aa19.42■□□□□ 0.7
RARA-208ENST00000577646 TIAM1Q13009 1591 aa19.41■□□□□ 0.7
RARA-208ENST00000577646 PPRC1Q5VV67 1664 aaKnown RBP19.41■□□□□ 0.7
RARA-208ENST00000577646 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.41■□□□□ 0.7
RARA-208ENST00000577646 EHBP1L1Q8N3D4 1523 aa19.39■□□□□ 0.69
RARA-208ENST00000577646 ARAP3Q8WWN8 1544 aa19.38■□□□□ 0.69
RARA-208ENST00000577646 PLCH2O75038 1416 aa19.37■□□□□ 0.69
RARA-208ENST00000577646 LRRC9Q6ZRR7 1453 aa19.35■□□□□ 0.69
RARA-208ENST00000577646 NEO1Q92859 1461 aa19.35■□□□□ 0.69
RARA-208ENST00000577646 EFCAB2Q5VUJ9 269 aa19.33■□□□□ 0.68
RARA-208ENST00000577646 TTC37Q6PGP7 1564 aa19.32■□□□□ 0.68
RARA-208ENST00000577646 CFAP74Q9C0B2 1584 aa19.32■□□□□ 0.68
RARA-208ENST00000577646 MYO5CQ9NQX4 1742 aa19.3■□□□□ 0.68
RARA-208ENST00000577646 COL17A1Q9UMD9 1497 aaPredicted RBP19.29■□□□□ 0.68
RARA-208ENST00000577646 SUPT6HQ7KZ85 1726 aaKnown RBP19.29■□□□□ 0.68
RARA-208ENST00000577646 CCNB3Q8WWL7 1395 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms