RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 JPH4Q96JJ6 628 aa20.74■□□□□ 0.91
CTDNEP1-212ENST00000576613 NPM1P06748 294 aaKnown RBP eCLIP20.65■□□□□ 0.9
CTDNEP1-212ENST00000576613 MAPKBP1O60336 1514 aa20.63■□□□□ 0.89
CTDNEP1-212ENST00000576613 ABCC10Q5T3U5 1492 aa20.62■□□□□ 0.89
CTDNEP1-212ENST00000576613 CUL7Q14999 1698 aa20.61■□□□□ 0.89
CTDNEP1-212ENST00000576613 ADCY10Q96PN6 1610 aa20.6■□□□□ 0.89
CTDNEP1-212ENST00000576613 KIAA0586Q9BVV6 1533 aa20.59■□□□□ 0.89
CTDNEP1-212ENST00000576613 FAM69CQ0P6D2 419 aa20.59■□□□□ 0.89
CTDNEP1-212ENST00000576613 DIP2BQ9P265 1576 aa20.59■□□□□ 0.89
CTDNEP1-212ENST00000576613 KIF27Q86VH2 1401 aa20.57■□□□□ 0.88
CTDNEP1-212ENST00000576613 IGF1RP08069 1367 aa20.53■□□□□ 0.88
CTDNEP1-212ENST00000576613 KDM6BO15054 1643 aa20.49■□□□□ 0.87
CTDNEP1-212ENST00000576613 TSPOAP1O95153 1857 aa20.45■□□□□ 0.86
CTDNEP1-212ENST00000576613 PTPRGP23470 1445 aa20.44■□□□□ 0.86
CTDNEP1-212ENST00000576613 CARMIL2Q6F5E8 1435 aa20.43■□□□□ 0.86
CTDNEP1-212ENST00000576613 CARMIL1Q5VZK9 1371 aa20.41■□□□□ 0.86
CTDNEP1-212ENST00000576613 IQGAP2Q13576 1575 aa20.39■□□□□ 0.85
CTDNEP1-212ENST00000576613 TNIKQ9UKE5 1360 aa20.38■□□□□ 0.85
CTDNEP1-212ENST00000576613 ABCC2Q92887 1545 aa20.37■□□□□ 0.85
CTDNEP1-212ENST00000576613 TTBK1Q5TCY1 1321 aaPredicted RBP20.35■□□□□ 0.85
CTDNEP1-212ENST00000576613 PLB1Q6P1J6 1458 aa20.33■□□□□ 0.85
CTDNEP1-212ENST00000576613 UHRF1BP1LA0JNW5 1464 aa20.31■□□□□ 0.84
CTDNEP1-212ENST00000576613 GLI2P10070 1586 aa20.31■□□□□ 0.84
CTDNEP1-212ENST00000576613 ASXL2Q76L83 1435 aa20.31■□□□□ 0.84
CTDNEP1-212ENST00000576613 KDM4FA0A1W2PPD8 638 aa20.29■□□□□ 0.84
CTDNEP1-212ENST00000576613 UACAQ9BZF9 1416 aa20.27■□□□□ 0.84
CTDNEP1-212ENST00000576613 PPRC1Q5VV67 1664 aaKnown RBP20.26■□□□□ 0.83
CTDNEP1-212ENST00000576613 DISP1Q96F81 1524 aa20.26■□□□□ 0.83
CTDNEP1-212ENST00000576613 UGGT2Q9NYU1 1516 aa20.23■□□□□ 0.83
CTDNEP1-212ENST00000576613 RAPGEF2Q9Y4G8 1499 aa20.23■□□□□ 0.83
CTDNEP1-212ENST00000576613 KDM5BQ9UGL1 1544 aa20.22■□□□□ 0.83
CTDNEP1-212ENST00000576613 KIAA0556O60303 1618 aa20.2■□□□□ 0.82
CTDNEP1-212ENST00000576613 ZCCHC11Q5TAX3 1644 aaKnown RBP20.2■□□□□ 0.82
CTDNEP1-212ENST00000576613 MAP3K4Q9Y6R4 1608 aa20.2■□□□□ 0.82
CTDNEP1-212ENST00000576613 EPRSP07814 1512 aaKnown RBP20.19■□□□□ 0.82
CTDNEP1-212ENST00000576613 TEX14Q8IWB6 1497 aa20.18■□□□□ 0.82
CTDNEP1-212ENST00000576613 ADGRL1O94910 1474 aa20.14■□□□□ 0.81
CTDNEP1-212ENST00000576613 CTTNBP2Q8WZ74 1663 aa20.13■□□□□ 0.81
CTDNEP1-212ENST00000576613 COL17A1Q9UMD9 1497 aaPredicted RBP20.1■□□□□ 0.81
CTDNEP1-212ENST00000576613 WDR7Q9Y4E6 1490 aa20.1■□□□□ 0.81
CTDNEP1-212ENST00000576613 GOLGA3Q08378 1498 aa20.07■□□□□ 0.8
CTDNEP1-212ENST00000576613 CFAP43Q8NDM7 1665 aa20.03■□□□□ 0.8
CTDNEP1-212ENST00000576613 ABCA8O94911 1581 aa20.01■□□□□ 0.79
CTDNEP1-212ENST00000576613 MAGI3Q5TCQ9 1506 aa19.99■□□□□ 0.79
CTDNEP1-212ENST00000576613 CD109Q6YHK3 1445 aa19.99■□□□□ 0.79
CTDNEP1-212ENST00000576613 HECW2Q9P2P5 1572 aa19.95■□□□□ 0.78
CTDNEP1-212ENST00000576613 PRXQ9BXM0 1461 aa19.94■□□□□ 0.78
CTDNEP1-212ENST00000576613 KCNH8Q96L42 1107 aa19.94■□□□□ 0.78
CTDNEP1-212ENST00000576613 FAM9AQ8IZU1 332 aaPredicted RBP19.93■□□□□ 0.78
CTDNEP1-212ENST00000576613 ILDR1Q86SU0 546 aaPredicted RBP19.92■□□□□ 0.78
CTDNEP1-212ENST00000576613 KIF21BO75037 1637 aa19.86■□□□□ 0.77
CTDNEP1-212ENST00000576613 ARAP3Q8WWN8 1544 aa19.85■□□□□ 0.77
CTDNEP1-212ENST00000576613 ATP10BO94823 1461 aa19.82■□□□□ 0.76
CTDNEP1-212ENST00000576613 ABCA9Q8IUA7 1624 aa19.82■□□□□ 0.76
CTDNEP1-212ENST00000576613 PHLDB1Q86UU1 1377 aa19.8■□□□□ 0.76
CTDNEP1-212ENST00000576613 SAMD9Q5K651 1589 aa19.79■□□□□ 0.76
CTDNEP1-212ENST00000576613 ARID3CA6NKF2 412 aa19.79■□□□□ 0.76
CTDNEP1-212ENST00000576613 P3H3Q8IVL6 736 aa19.79■□□□□ 0.76
CTDNEP1-212ENST00000576613 RAPGEF6Q8TEU7 1601 aa19.77■□□□□ 0.76
CTDNEP1-212ENST00000576613 NEO1Q92859 1461 aa19.73■□□□□ 0.75
CTDNEP1-212ENST00000576613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.71■□□□□ 0.75
CTDNEP1-212ENST00000576613 HNRNPUL2Q1KMD3 747 aaKnown RBP19.71■□□□□ 0.75
CTDNEP1-212ENST00000576613 CSRNP3Q8WYN3 585 aa19.71■□□□□ 0.75
CTDNEP1-212ENST00000576613 ADAMTSL3P82987 1691 aa19.69■□□□□ 0.74
CTDNEP1-212ENST00000576613 PTPRMP28827 1452 aa19.67■□□□□ 0.74
CTDNEP1-212ENST00000576613 RAPGEF3O95398 923 aa19.67■□□□□ 0.74
CTDNEP1-212ENST00000576613 NUP153P49790 1475 aaKnown RBP19.67■□□□□ 0.74
CTDNEP1-212ENST00000576613 FRMPD1Q5SYB0 1578 aa19.66■□□□□ 0.74
CTDNEP1-212ENST00000576613 EEA1Q15075 1411 aa19.65■□□□□ 0.74
CTDNEP1-212ENST00000576613 BCORL1Q5H9F3 1711 aa19.65■□□□□ 0.74
CTDNEP1-212ENST00000576613 CFAP74Q9C0B2 1584 aa19.62■□□□□ 0.73
CTDNEP1-212ENST00000576613 FHOD3Q2V2M9 1422 aa19.61■□□□□ 0.73
CTDNEP1-212ENST00000576613 ARID4BQ4LE39 1312 aaPredicted RBP19.61■□□□□ 0.73
CTDNEP1-212ENST00000576613 MADDQ8WXG6 1647 aa19.61■□□□□ 0.73
CTDNEP1-212ENST00000576613 ARHGEF40Q8TER5 1519 aa19.61■□□□□ 0.73
CTDNEP1-212ENST00000576613 PLEKHD1A6NEE1 506 aa19.59■□□□□ 0.73
CTDNEP1-212ENST00000576613 RANGAP1P46060 587 aaPredicted RBP19.59■□□□□ 0.73
CTDNEP1-212ENST00000576613 RICTORQ6R327 1708 aa19.59■□□□□ 0.73
CTDNEP1-212ENST00000576613 DENND4BO75064 1496 aaPredicted RBP19.58■□□□□ 0.72
CTDNEP1-212ENST00000576613 EFCAB5A4FU69 1503 aa19.57■□□□□ 0.72
CTDNEP1-212ENST00000576613 FANCAO15360 1455 aa19.56■□□□□ 0.72
CTDNEP1-212ENST00000576613 PCF11O94913 1555 aaKnown RBP19.56■□□□□ 0.72
CTDNEP1-212ENST00000576613 AKNAQ7Z591 1439 aa19.55■□□□□ 0.72
CTDNEP1-212ENST00000576613 FBXO41Q8TF61 875 aa19.54■□□□□ 0.72
CTDNEP1-212ENST00000576613 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.54■□□□□ 0.72
CTDNEP1-212ENST00000576613 RIMS1Q86UR5 1692 aaKnown RBP19.53■□□□□ 0.72
CTDNEP1-212ENST00000576613 TTC37Q6PGP7 1564 aa19.53■□□□□ 0.72
CTDNEP1-212ENST00000576613 ZMYM4Q5VZL5 1548 aa19.52■□□□□ 0.72
CTDNEP1-212ENST00000576613 LMTK3Q96Q04 1460 aa19.51■□□□□ 0.71
CTDNEP1-212ENST00000576613 POGZQ7Z3K3 1410 aa19.51■□□□□ 0.71
CTDNEP1-212ENST00000576613 ZFYVE16Q7Z3T8 1539 aa19.49■□□□□ 0.71
CTDNEP1-212ENST00000576613 MAGI2Q86UL8 1455 aa19.48■□□□□ 0.71
CTDNEP1-212ENST00000576613 CDK13Q14004 1512 aaKnown RBP19.45■□□□□ 0.7
CTDNEP1-212ENST00000576613 HECW1Q76N89 1606 aa19.43■□□□□ 0.7
CTDNEP1-212ENST00000576613 YEATS2Q9ULM3 1422 aa19.42■□□□□ 0.7
CTDNEP1-212ENST00000576613 SIGLEC1Q9BZZ2 1709 aa19.41■□□□□ 0.7
CTDNEP1-212ENST00000576613 FER1L4A9Z1Z3 1794 aa19.41■□□□□ 0.7
CTDNEP1-212ENST00000576613 PLCH2O75038 1416 aa19.41■□□□□ 0.7
CTDNEP1-212ENST00000576613 MYO5CQ9NQX4 1742 aa19.4■□□□□ 0.7
CTDNEP1-212ENST00000576613 SCAPERQ9BY12 1400 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms