RNA–Protein interactions for RNA: ENST00000576221.1

PCTP-208, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 5

Gene PCTP, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-208ENST00000576221 RAPGEF2Q9Y4G8 1499 aa12.98□□□□□ -0.33
PCTP-208ENST00000576221 CUL7Q14999 1698 aa12.98□□□□□ -0.33
PCTP-208ENST00000576221 EHMT2Q96KQ7 1210 aa12.97□□□□□ -0.33
PCTP-208ENST00000576221 ARAP1Q96P48 1450 aa12.96□□□□□ -0.34
PCTP-208ENST00000576221 NUP160Q12769 1436 aa12.94□□□□□ -0.34
PCTP-208ENST00000576221 CEP170Q5SW79 1584 aa12.94□□□□□ -0.34
PCTP-208ENST00000576221 PRXQ9BXM0 1461 aa12.93□□□□□ -0.34
PCTP-208ENST00000576221 UBTFP17480 764 aaKnown RBP12.92□□□□□ -0.34
PCTP-208ENST00000576221 JPH4Q96JJ6 628 aa12.92□□□□□ -0.34
PCTP-208ENST00000576221 KIAA0586Q9BVV6 1533 aa12.89□□□□□ -0.35
PCTP-208ENST00000576221 ERCC6L2Q5T890 1561 aa12.88□□□□□ -0.35
PCTP-208ENST00000576221 RANGAP1P46060 587 aaPredicted RBP12.86□□□□□ -0.35
PCTP-208ENST00000576221 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
PCTP-208ENST00000576221 PRG4Q92954 1404 aaPredicted RBP12.83□□□□□ -0.36
PCTP-208ENST00000576221 SHROOM2Q13796 1616 aa12.82□□□□□ -0.36
PCTP-208ENST00000576221 TTBK1Q5TCY1 1321 aaPredicted RBP12.82□□□□□ -0.36
PCTP-208ENST00000576221 KIF21BO75037 1637 aa12.81□□□□□ -0.36
PCTP-208ENST00000576221 CARMIL2Q6F5E8 1435 aa12.8□□□□□ -0.36
PCTP-208ENST00000576221 IQGAP2Q13576 1575 aa12.79□□□□□ -0.36
PCTP-208ENST00000576221 LOC105371045A0A1W2PR82 267 aa12.77□□□□□ -0.37
PCTP-208ENST00000576221 P3H3Q8IVL6 736 aa12.77□□□□□ -0.37
PCTP-208ENST00000576221 PTPRGP23470 1445 aa12.73□□□□□ -0.37
PCTP-208ENST00000576221 TNIKQ9UKE5 1360 aa12.73□□□□□ -0.37
PCTP-208ENST00000576221 UGGT2Q9NYU1 1516 aa12.72□□□□□ -0.37
PCTP-208ENST00000576221 ILDR1Q86SU0 546 aaPredicted RBP12.71□□□□□ -0.37
PCTP-208ENST00000576221 CTTNBP2Q8WZ74 1663 aa12.7□□□□□ -0.38
PCTP-208ENST00000576221 DISP1Q96F81 1524 aa12.69□□□□□ -0.38
PCTP-208ENST00000576221 NPM1P06748 294 aaKnown RBP eCLIP12.69□□□□□ -0.38
PCTP-208ENST00000576221 KIAA0556O60303 1618 aa12.65□□□□□ -0.38
PCTP-208ENST00000576221 CLIP1P30622 1438 aa12.64□□□□□ -0.39
PCTP-208ENST00000576221 ATP1B4Q9UN42 357 aaPredicted RBP12.64□□□□□ -0.39
PCTP-208ENST00000576221 FHOD3Q2V2M9 1422 aa12.63□□□□□ -0.39
PCTP-208ENST00000576221 EFCAB5A4FU69 1503 aa12.62□□□□□ -0.39
PCTP-208ENST00000576221 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
PCTP-208ENST00000576221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.61□□□□□ -0.39
PCTP-208ENST00000576221 HNRNPUL2Q1KMD3 747 aaKnown RBP12.61□□□□□ -0.39
PCTP-208ENST00000576221 ADCY10Q96PN6 1610 aa12.61□□□□□ -0.39
PCTP-208ENST00000576221 CEP162Q5TB80 1403 aa12.6□□□□□ -0.39
PCTP-208ENST00000576221 ARHGAP35Q9NRY4 1499 aa12.59□□□□□ -0.39
PCTP-208ENST00000576221 ARID3CA6NKF2 412 aa12.59□□□□□ -0.39
PCTP-208ENST00000576221 SAMD9Q5K651 1589 aa12.58□□□□□ -0.4
PCTP-208ENST00000576221 FMN1Q68DA7 1419 aa12.58□□□□□ -0.4
PCTP-208ENST00000576221 PLB1Q6P1J6 1458 aa12.58□□□□□ -0.4
PCTP-208ENST00000576221 UHRF1BP1LA0JNW5 1464 aa12.54□□□□□ -0.4
PCTP-208ENST00000576221 FAM69CQ0P6D2 419 aa12.54□□□□□ -0.4
PCTP-208ENST00000576221 ABCC2Q92887 1545 aa12.53□□□□□ -0.4
PCTP-208ENST00000576221 KIF13AQ9H1H9 1805 aa12.52□□□□□ -0.41
PCTP-208ENST00000576221 MAPKBP1O60336 1514 aa12.52□□□□□ -0.41
PCTP-208ENST00000576221 ABCC10Q5T3U5 1492 aa12.51□□□□□ -0.41
PCTP-208ENST00000576221 ABCA8O94911 1581 aa12.5□□□□□ -0.41
PCTP-208ENST00000576221 PLEKHD1A6NEE1 506 aa12.49□□□□□ -0.41
PCTP-208ENST00000576221 CDK11AQ9UQ88 783 aaPredicted RBP12.49□□□□□ -0.41
PCTP-208ENST00000576221 KCNH8Q96L42 1107 aa12.48□□□□□ -0.41
PCTP-208ENST00000576221 RAPGEF6Q8TEU7 1601 aa12.48□□□□□ -0.41
PCTP-208ENST00000576221 KDM5BQ9UGL1 1544 aa12.47□□□□□ -0.41
PCTP-208ENST00000576221 ASXL2Q76L83 1435 aa12.47□□□□□ -0.41
PCTP-208ENST00000576221 APLP2Q06481 763 aa12.47□□□□□ -0.41
PCTP-208ENST00000576221 DIP2BQ9P265 1576 aa12.47□□□□□ -0.41
PCTP-208ENST00000576221 ATP10BO94823 1461 aa12.46□□□□□ -0.41
PCTP-208ENST00000576221 NUP153P49790 1475 aaKnown RBP12.46□□□□□ -0.42
PCTP-208ENST00000576221 CASKIN1Q8WXD9 1431 aa12.45□□□□□ -0.42
PCTP-208ENST00000576221 VPS8Q8N3P4 1428 aa12.44□□□□□ -0.42
PCTP-208ENST00000576221 ZCCHC11Q5TAX3 1644 aaKnown RBP12.44□□□□□ -0.42
PCTP-208ENST00000576221 HECW1Q76N89 1606 aa12.42□□□□□ -0.42
PCTP-208ENST00000576221 TSPOAP1O95153 1857 aa12.42□□□□□ -0.42
PCTP-208ENST00000576221 EPRSP07814 1512 aaKnown RBP12.42□□□□□ -0.42
PCTP-208ENST00000576221 FYCO1Q9BQS8 1478 aa12.41□□□□□ -0.42
PCTP-208ENST00000576221 CCDC18Q5T9S5 1454 aa12.4□□□□□ -0.43
PCTP-208ENST00000576221 WDR7Q9Y4E6 1490 aa12.4□□□□□ -0.43
PCTP-208ENST00000576221 PCF11O94913 1555 aaKnown RBP12.39□□□□□ -0.43
PCTP-208ENST00000576221 CDK13Q14004 1512 aaKnown RBP12.38□□□□□ -0.43
PCTP-208ENST00000576221 MTUS2Q5JR59 1369 aa12.37□□□□□ -0.43
PCTP-208ENST00000576221 GLI2P10070 1586 aa12.37□□□□□ -0.43
PCTP-208ENST00000576221 KDM4FA0A1W2PPD8 638 aa12.35□□□□□ -0.43
PCTP-208ENST00000576221 PPRC1Q5VV67 1664 aaKnown RBP12.34□□□□□ -0.43
PCTP-208ENST00000576221 TROQ12816 1431 aaPredicted RBP12.34□□□□□ -0.43
PCTP-208ENST00000576221 CD109Q6YHK3 1445 aa12.32□□□□□ -0.44
PCTP-208ENST00000576221 MAP3K4Q9Y6R4 1608 aa12.31□□□□□ -0.44
PCTP-208ENST00000576221 KDM6BO15054 1643 aa12.29□□□□□ -0.44
PCTP-208ENST00000576221 COL17A1Q9UMD9 1497 aaPredicted RBP12.29□□□□□ -0.44
PCTP-208ENST00000576221 KANK4Q5T7N3 995 aaPredicted RBP12.29□□□□□ -0.44
PCTP-208ENST00000576221 EFCAB2Q5VUJ9 269 aa12.26□□□□□ -0.45
PCTP-208ENST00000576221 CCNB3Q8WWL7 1395 aa12.26□□□□□ -0.45
PCTP-208ENST00000576221 MAP3K1Q13233 1512 aa12.26□□□□□ -0.45
PCTP-208ENST00000576221 TEX14Q8IWB6 1497 aa12.25□□□□□ -0.45
PCTP-208ENST00000576221 TIAM1Q13009 1591 aa12.25□□□□□ -0.45
PCTP-208ENST00000576221 KIF14Q15058 1648 aa12.25□□□□□ -0.45
PCTP-208ENST00000576221 MAGI3Q5TCQ9 1506 aa12.24□□□□□ -0.45
PCTP-208ENST00000576221 LRRC9Q6ZRR7 1453 aa12.24□□□□□ -0.45
PCTP-208ENST00000576221 PPARGC1BQ86YN6 1023 aaKnown RBP12.24□□□□□ -0.45
PCTP-208ENST00000576221 EHBP1L1Q8N3D4 1523 aa12.24□□□□□ -0.45
PCTP-208ENST00000576221 CFAP43Q8NDM7 1665 aa12.24□□□□□ -0.45
PCTP-208ENST00000576221 CFDP1Q9UEE9 299 aaPredicted RBP12.24□□□□□ -0.45
PCTP-208ENST00000576221 ZNF777Q9ULD5 760 aaPredicted RBP12.24□□□□□ -0.45
PCTP-208ENST00000576221 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.23□□□□□ -0.45
PCTP-208ENST00000576221 LRRIQ1Q96JM4 1722 aa12.23□□□□□ -0.45
PCTP-208ENST00000576221 PLCH2O75038 1416 aa12.22□□□□□ -0.45
PCTP-208ENST00000576221 ABCA9Q8IUA7 1624 aa12.22□□□□□ -0.45
PCTP-208ENST00000576221 PHLDB1Q86UU1 1377 aa12.2□□□□□ -0.46
PCTP-208ENST00000576221 NCOA2Q15596 1464 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms