RNA–Protein interactions for RNA: ENST00000575320.1

TFAP4-206, Transcript of transcription factor AP-4, humanhuman

TSL 2

Gene TFAP4, Length 6,491 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP4-206ENST00000575320 IRX6P78412 446 aaPredicted RBP18.62■□□□□ 0.57
TFAP4-206ENST00000575320 SENP3Q9H4L4 574 aaPredicted RBP18.56■□□□□ 0.56
TFAP4-206ENST00000575320 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
TFAP4-206ENST00000575320 MRS2Q9HD23 443 aa18.54■□□□□ 0.56
TFAP4-206ENST00000575320 MIER1Q8N108 512 aa18.52■□□□□ 0.56
TFAP4-206ENST00000575320 DDRGK1Q96HY6 314 aa18.5■□□□□ 0.55
TFAP4-206ENST00000575320 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
TFAP4-206ENST00000575320 TRIM44Q96DX7 344 aaPredicted RBP18.49■□□□□ 0.55
TFAP4-206ENST00000575320 NPHP1O15259 732 aa18.48■□□□□ 0.55
TFAP4-206ENST00000575320 PLEKHD1A6NEE1 506 aa18.47■□□□□ 0.55
TFAP4-206ENST00000575320 BECN1Q14457 450 aa18.45■□□□□ 0.54
TFAP4-206ENST00000575320 LMOD2Q6P5Q4 547 aa18.44■□□□□ 0.54
TFAP4-206ENST00000575320 MYH16Q9H6N6 1097 aa18.43■□□□□ 0.54
TFAP4-206ENST00000575320 ANP32EQ9BTT0 268 aa18.42■□□□□ 0.54
TFAP4-206ENST00000575320 CHIC2Q9UKJ5 165 aa18.41■□□□□ 0.54
TFAP4-206ENST00000575320 NCLP19338 710 aaKnown RBP18.41■□□□□ 0.54
TFAP4-206ENST00000575320 CDK11BP21127 795 aaKnown RBP18.4■□□□□ 0.54
TFAP4-206ENST00000575320 HIRIP3Q9BW71 556 aaPredicted RBP18.4■□□□□ 0.54
TFAP4-206ENST00000575320 KDM2AQ9Y2K7 1162 aa18.38■□□□□ 0.53
TFAP4-206ENST00000575320 TNNT2P45379 298 aaPredicted RBP18.37■□□□□ 0.53
TFAP4-206ENST00000575320 GOLGA6L22H0YM25 854 aa18.36■□□□□ 0.53
TFAP4-206ENST00000575320 MLECQ14165 292 aa18.34■□□□□ 0.53
TFAP4-206ENST00000575320 MTUS2Q5JR59 1369 aa18.33■□□□□ 0.52
TFAP4-206ENST00000575320 PTMAP06454 111 aaKnown RBP18.32■□□□□ 0.52
TFAP4-206ENST00000575320 HDGFP51858 240 aaKnown RBP18.29■□□□□ 0.52
TFAP4-206ENST00000575320 RTN4Q9NQC3 1192 aaKnown RBP18.29■□□□□ 0.52
TFAP4-206ENST00000575320 DNTTIP2Q5QJE6 756 aaKnown RBP18.28■□□□□ 0.52
TFAP4-206ENST00000575320 NAP1L5Q96NT1 182 aaPredicted RBP18.28■□□□□ 0.52
TFAP4-206ENST00000575320 EIF4G2P78344 907 aaKnown RBP eCLIP18.26■□□□□ 0.51
TFAP4-206ENST00000575320 PPM1GO15355 546 aaPredicted RBP18.25■□□□□ 0.51
TFAP4-206ENST00000575320 ERICH6BQ5W0A0 696 aa18.25■□□□□ 0.51
TFAP4-206ENST00000575320 TPRNQ4KMQ1 711 aa18.23■□□□□ 0.51
TFAP4-206ENST00000575320 LAS1LQ9Y4W2 734 aaKnown RBP18.23■□□□□ 0.51
TFAP4-206ENST00000575320 SUPT16HQ9Y5B9 1047 aaKnown RBP18.23■□□□□ 0.51
TFAP4-206ENST00000575320 BAZ1BQ9UIG0 1483 aaKnown RBP18.22■□□□□ 0.51
TFAP4-206ENST00000575320 SENP3-EIF4A1A0A087X0R7 540 aa18.2■□□□□ 0.5
TFAP4-206ENST00000575320 ZRSR1Q15695 479 aaKnown RBP18.19■□□□□ 0.5
TFAP4-206ENST00000575320 CCDC180Q9P1Z9 1646 aa18.18■□□□□ 0.5
TFAP4-206ENST00000575320 POGKQ9P215 609 aa18.17■□□□□ 0.5
TFAP4-206ENST00000575320 CASC1Q6TDU7 716 aa18.16■□□□□ 0.5
TFAP4-206ENST00000575320 NOP58Q9Y2X3 529 aaKnown RBP18.16■□□□□ 0.5
TFAP4-206ENST00000575320 CCDC9Q9Y3X0 531 aaKnown RBP18.14■□□□□ 0.49
TFAP4-206ENST00000575320 RSF1Q96T23 1441 aaPredicted RBP18.13■□□□□ 0.49
TFAP4-206ENST00000575320 CFDP1Q9UEE9 299 aaPredicted RBP18.11■□□□□ 0.49
TFAP4-206ENST00000575320 RRP7BPQ9NSQ0 103 aa18.11■□□□□ 0.49
TFAP4-206ENST00000575320 PPP4R2Q9NY27 417 aa18.1■□□□□ 0.49
TFAP4-206ENST00000575320 FTSJ3Q8IY81 847 aaKnown RBP18.1■□□□□ 0.49
TFAP4-206ENST00000575320 NACADO15069 1562 aa18.1■□□□□ 0.49
TFAP4-206ENST00000575320 PLCB2Q00722 1185 aa18.09■□□□□ 0.49
TFAP4-206ENST00000575320 KANK1Q14678 1352 aa18.08■□□□□ 0.49
TFAP4-206ENST00000575320 RGS3P49796 1198 aa18.07■□□□□ 0.48
TFAP4-206ENST00000575320 CFAP53Q96M91 514 aa18.05■□□□□ 0.48
TFAP4-206ENST00000575320 HSP90AB1P08238 724 aaKnown RBP18.04■□□□□ 0.48
TFAP4-206ENST00000575320 TMX4Q9H1E5 349 aaPredicted RBP18.04■□□□□ 0.48
TFAP4-206ENST00000575320 DCAF8L1A6NGE4 600 aa18.02■□□□□ 0.48
TFAP4-206ENST00000575320 CLIP1P30622 1438 aa18.02■□□□□ 0.48
TFAP4-206ENST00000575320 RGL3Q3MIN7 710 aa18.02■□□□□ 0.48
TFAP4-206ENST00000575320 KNSTRNQ9Y448 316 aa18.02■□□□□ 0.47
TFAP4-206ENST00000575320 EIF4G1Q04637 1599 aaKnown RBP18■□□□□ 0.47
TFAP4-206ENST00000575320 GOLGA6L6A8MZA4 724 aa18■□□□□ 0.47
TFAP4-206ENST00000575320 TULP1O00294 542 aaPredicted RBP17.99■□□□□ 0.47
TFAP4-206ENST00000575320 NEUROD2Q15784 382 aa17.99■□□□□ 0.47
TFAP4-206ENST00000575320 DEKP35659 375 aaKnown RBP17.99■□□□□ 0.47
TFAP4-206ENST00000575320 GOLGA2Q08379 1002 aa17.98■□□□□ 0.47
TFAP4-206ENST00000575320 MEX3CQ5U5Q3 659 aaKnown RBP17.97■□□□□ 0.47
TFAP4-206ENST00000575320 B4GALNT3Q6L9W6 998 aa17.97■□□□□ 0.47
TFAP4-206ENST00000575320 FRAT1Q92837 279 aaPredicted RBP17.97■□□□□ 0.47
TFAP4-206ENST00000575320 CDCA8Q53HL2 280 aa17.97■□□□□ 0.47
TFAP4-206ENST00000575320 PHF23Q9BUL5 403 aaPredicted RBP17.96■□□□□ 0.47
TFAP4-206ENST00000575320 TAOK2Q9UL54 1235 aa17.95■□□□□ 0.46
TFAP4-206ENST00000575320 PDS5BQ9NTI5 1447 aa17.94■□□□□ 0.46
TFAP4-206ENST00000575320 CSB-PGBD3P0DP91 1061 aa17.93■□□□□ 0.46
TFAP4-206ENST00000575320 ZCCHC6Q5VYS8 1495 aaKnown RBP17.93■□□□□ 0.46
TFAP4-206ENST00000575320 CARD11Q9BXL7 1154 aa17.93■□□□□ 0.46
TFAP4-206ENST00000575320 MSNP26038 577 aaKnown RBP17.93■□□□□ 0.46
TFAP4-206ENST00000575320 L1TD1Q5T7N2 865 aaKnown RBP17.93■□□□□ 0.46
TFAP4-206ENST00000575320 MAPK8IP3Q9UPT6 1336 aa17.92■□□□□ 0.46
TFAP4-206ENST00000575320 CHAF1AQ13111 956 aaPredicted RBP17.92■□□□□ 0.46
TFAP4-206ENST00000575320 HSCBQ8IWL3 235 aa17.91■□□□□ 0.46
TFAP4-206ENST00000575320 KIF27Q86VH2 1401 aa17.9■□□□□ 0.46
TFAP4-206ENST00000575320 GGT6Q6P531 493 aa17.9■□□□□ 0.46
TFAP4-206ENST00000575320 AMER1Q5JTC6 1135 aaPredicted RBP17.9■□□□□ 0.46
TFAP4-206ENST00000575320 EID1Q9Y6B2 187 aa17.9■□□□□ 0.46
TFAP4-206ENST00000575320 CARMIL2Q6F5E8 1435 aa17.89■□□□□ 0.45
TFAP4-206ENST00000575320 NRDCO43847 1150 aa17.89■□□□□ 0.45
TFAP4-206ENST00000575320 SPRYD3Q8NCJ5 442 aa17.88■□□□□ 0.45
TFAP4-206ENST00000575320 MYO15BQ96JP2 1530 aa17.87■□□□□ 0.45
TFAP4-206ENST00000575320 PAK3O75914 559 aaPredicted RBP17.87■□□□□ 0.45
TFAP4-206ENST00000575320 FGD1P98174 961 aa17.86■□□□□ 0.45
TFAP4-206ENST00000575320 CC2D1BQ5T0F9 858 aaKnown RBP17.86■□□□□ 0.45
TFAP4-206ENST00000575320 CEP162Q5TB80 1403 aa17.86■□□□□ 0.45
TFAP4-206ENST00000575320 CHMP4BQ9H444 224 aaKnown RBP17.85■□□□□ 0.45
TFAP4-206ENST00000575320 NUDCQ9Y266 331 aa17.85■□□□□ 0.45
TFAP4-206ENST00000575320 CECR2Q9BXF3 1484 aa17.85■□□□□ 0.45
TFAP4-206ENST00000575320 NAP1L2Q9ULW6 460 aaPredicted RBP17.85■□□□□ 0.45
TFAP4-206ENST00000575320 OS9Q13438 667 aaPredicted RBP17.85■□□□□ 0.45
TFAP4-206ENST00000575320 RBM19Q9Y4C8 960 aaKnown RBP17.84■□□□□ 0.45
TFAP4-206ENST00000575320 SOX12O15370 315 aa17.84■□□□□ 0.45
TFAP4-206ENST00000575320 MS4A1P11836 297 aa17.84■□□□□ 0.45
TFAP4-206ENST00000575320 KCNJ4P48050 445 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms