RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 ERCC6L2Q5T890 1561 aa34.87■■■■□ 3.17
HCFC1R1-208ENST00000575214 KIAA0586Q9BVV6 1533 aa34.86■■■■□ 3.17
HCFC1R1-208ENST00000575214 RAPGEF2Q9Y4G8 1499 aa34.85■■■■□ 3.17
HCFC1R1-208ENST00000575214 PRG4Q92954 1404 aaPredicted RBP34.82■■■■□ 3.16
HCFC1R1-208ENST00000575214 CHIC1Q5VXU3 224 aa34.79■■■■□ 3.16
HCFC1R1-208ENST00000575214 PRXQ9BXM0 1461 aa34.68■■■■□ 3.14
HCFC1R1-208ENST00000575214 EEA1Q15075 1411 aa34.67■■■■□ 3.14
HCFC1R1-208ENST00000575214 CSRNP3Q8WYN3 585 aa34.66■■■■□ 3.14
HCFC1R1-208ENST00000575214 IQGAP2Q13576 1575 aa34.65■■■■□ 3.14
HCFC1R1-208ENST00000575214 FAM9AQ8IZU1 332 aaPredicted RBP34.59■■■■□ 3.13
HCFC1R1-208ENST00000575214 CARMIL2Q6F5E8 1435 aa34.51■■■■□ 3.12
HCFC1R1-208ENST00000575214 CTTNBP2Q8WZ74 1663 aa34.47■■■■□ 3.11
HCFC1R1-208ENST00000575214 UGGT2Q9NYU1 1516 aa34.44■■■■□ 3.1
HCFC1R1-208ENST00000575214 TTBK1Q5TCY1 1321 aaPredicted RBP34.41■■■■□ 3.1
HCFC1R1-208ENST00000575214 DISP1Q96F81 1524 aa34.41■■■■□ 3.1
HCFC1R1-208ENST00000575214 TNIKQ9UKE5 1360 aa34.4■■■■□ 3.1
HCFC1R1-208ENST00000575214 TRHP20396 242 aaPredicted RBP34.4■■■■□ 3.1
HCFC1R1-208ENST00000575214 PTPRGP23470 1445 aa34.4■■■■□ 3.1
HCFC1R1-208ENST00000575214 KIAA0556O60303 1618 aa34.32■■■■□ 3.08
HCFC1R1-208ENST00000575214 KIF21BO75037 1637 aa34.3■■■■□ 3.08
HCFC1R1-208ENST00000575214 GOLGA3Q08378 1498 aa34.27■■■■□ 3.08
HCFC1R1-208ENST00000575214 ADCY10Q96PN6 1610 aa34.27■■■■□ 3.08
HCFC1R1-208ENST00000575214 NPM1P06748 294 aaKnown RBP eCLIP34.24■■■■□ 3.07
HCFC1R1-208ENST00000575214 EHMT2Q96KQ7 1210 aa34.19■■■■□ 3.06
HCFC1R1-208ENST00000575214 UACAQ9BZF9 1416 aa34.15■■■■□ 3.06
HCFC1R1-208ENST00000575214 RANGAP1P46060 587 aaPredicted RBP34.11■■■■□ 3.05
HCFC1R1-208ENST00000575214 UHRF1BP1LA0JNW5 1464 aa34.1■■■■□ 3.05
HCFC1R1-208ENST00000575214 P3H3Q8IVL6 736 aa34.1■■■■□ 3.05
HCFC1R1-208ENST00000575214 UBTFP17480 764 aaKnown RBP34.09■■■■□ 3.05
HCFC1R1-208ENST00000575214 ABCC2Q92887 1545 aa34.08■■■■□ 3.05
HCFC1R1-208ENST00000575214 MAPKBP1O60336 1514 aa34.07■■■■□ 3.04
HCFC1R1-208ENST00000575214 SAMD9Q5K651 1589 aa34.03■■■■□ 3.04
HCFC1R1-208ENST00000575214 PLB1Q6P1J6 1458 aa34.01■■■■□ 3.03
HCFC1R1-208ENST00000575214 KDM5BQ9UGL1 1544 aa33.94■■■■□ 3.02
HCFC1R1-208ENST00000575214 ABCC10Q5T3U5 1492 aa33.94■■■■□ 3.02
HCFC1R1-208ENST00000575214 ABCA8O94911 1581 aa33.94■■■■□ 3.02
HCFC1R1-208ENST00000575214 FAM69CQ0P6D2 419 aa33.91■■■■□ 3.02
HCFC1R1-208ENST00000575214 FHOD3Q2V2M9 1422 aa33.9■■■■□ 3.02
HCFC1R1-208ENST00000575214 EFCAB5A4FU69 1503 aa33.89■■■■□ 3.02
HCFC1R1-208ENST00000575214 ASXL2Q76L83 1435 aa33.88■■■■□ 3.01
HCFC1R1-208ENST00000575214 KIF13AQ9H1H9 1805 aa33.88■■■■□ 3.01
HCFC1R1-208ENST00000575214 DIP2BQ9P265 1576 aa33.87■■■■□ 3.01
HCFC1R1-208ENST00000575214 ZCCHC11Q5TAX3 1644 aaKnown RBP33.87■■■■□ 3.01
HCFC1R1-208ENST00000575214 ARID3CA6NKF2 412 aa33.76■■■■□ 3
HCFC1R1-208ENST00000575214 RAPGEF6Q8TEU7 1601 aa33.75■■■□□ 2.99
HCFC1R1-208ENST00000575214 ARHGAP35Q9NRY4 1499 aa33.72■■■□□ 2.99
HCFC1R1-208ENST00000575214 WDR7Q9Y4E6 1490 aa33.7■■■□□ 2.98
HCFC1R1-208ENST00000575214 ATP10BO94823 1461 aa33.68■■■□□ 2.98
HCFC1R1-208ENST00000575214 EPRSP07814 1512 aaKnown RBP33.68■■■□□ 2.98
HCFC1R1-208ENST00000575214 GLI2P10070 1586 aa33.65■■■□□ 2.98
HCFC1R1-208ENST00000575214 NUP153P49790 1475 aaKnown RBP33.64■■■□□ 2.98
HCFC1R1-208ENST00000575214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.61■■■□□ 2.97
HCFC1R1-208ENST00000575214 HNRNPUL2Q1KMD3 747 aaKnown RBP33.61■■■□□ 2.97
HCFC1R1-208ENST00000575214 FMN1Q68DA7 1419 aa33.61■■■□□ 2.97
HCFC1R1-208ENST00000575214 TSPOAP1O95153 1857 aa33.58■■■□□ 2.97
HCFC1R1-208ENST00000575214 KCNH8Q96L42 1107 aa33.58■■■□□ 2.97
HCFC1R1-208ENST00000575214 CLIP1P30622 1438 aa33.52■■■□□ 2.96
HCFC1R1-208ENST00000575214 ATP1B4Q9UN42 357 aaPredicted RBP33.5■■■□□ 2.95
HCFC1R1-208ENST00000575214 MAP3K4Q9Y6R4 1608 aa33.49■■■□□ 2.95
HCFC1R1-208ENST00000575214 HECW1Q76N89 1606 aa33.45■■■□□ 2.94
HCFC1R1-208ENST00000575214 PPRC1Q5VV67 1664 aaKnown RBP33.44■■■□□ 2.94
HCFC1R1-208ENST00000575214 CDK13Q14004 1512 aaKnown RBP33.41■■■□□ 2.94
HCFC1R1-208ENST00000575214 CD109Q6YHK3 1445 aa33.41■■■□□ 2.94
HCFC1R1-208ENST00000575214 PLEKHD1A6NEE1 506 aa33.41■■■□□ 2.94
HCFC1R1-208ENST00000575214 TEX14Q8IWB6 1497 aa33.39■■■□□ 2.94
HCFC1R1-208ENST00000575214 LOC105371045A0A1W2PR82 267 aa33.39■■■□□ 2.94
HCFC1R1-208ENST00000575214 CFAP43Q8NDM7 1665 aa33.39■■■□□ 2.94
HCFC1R1-208ENST00000575214 KDM6BO15054 1643 aa33.37■■■□□ 2.93
HCFC1R1-208ENST00000575214 CEP162Q5TB80 1403 aa33.34■■■□□ 2.93
HCFC1R1-208ENST00000575214 PCF11O94913 1555 aaKnown RBP33.32■■■□□ 2.92
HCFC1R1-208ENST00000575214 CASKIN1Q8WXD9 1431 aa33.32■■■□□ 2.92
HCFC1R1-208ENST00000575214 MAGI3Q5TCQ9 1506 aa33.31■■■□□ 2.92
HCFC1R1-208ENST00000575214 ABCA9Q8IUA7 1624 aa33.3■■■□□ 2.92
HCFC1R1-208ENST00000575214 CDK11AQ9UQ88 783 aaPredicted RBP33.26■■■□□ 2.92
HCFC1R1-208ENST00000575214 FYCO1Q9BQS8 1478 aa33.24■■■□□ 2.91
HCFC1R1-208ENST00000575214 CCDC18Q5T9S5 1454 aa33.21■■■□□ 2.91
HCFC1R1-208ENST00000575214 LRRIQ1Q96JM4 1722 aa33.2■■■□□ 2.91
HCFC1R1-208ENST00000575214 COL17A1Q9UMD9 1497 aaPredicted RBP33.18■■■□□ 2.9
HCFC1R1-208ENST00000575214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.17■■■□□ 2.9
HCFC1R1-208ENST00000575214 TROQ12816 1431 aaPredicted RBP33.14■■■□□ 2.9
HCFC1R1-208ENST00000575214 TTC37Q6PGP7 1564 aa33.12■■■□□ 2.89
HCFC1R1-208ENST00000575214 KIF14Q15058 1648 aa33.07■■■□□ 2.88
HCFC1R1-208ENST00000575214 NEO1Q92859 1461 aa33.06■■■□□ 2.88
HCFC1R1-208ENST00000575214 PHLDB1Q86UU1 1377 aa33.06■■■□□ 2.88
HCFC1R1-208ENST00000575214 ARAP3Q8WWN8 1544 aa33.02■■■□□ 2.88
HCFC1R1-208ENST00000575214 FANCAO15360 1455 aa33■■■□□ 2.87
HCFC1R1-208ENST00000575214 PLCH2O75038 1416 aa32.98■■■□□ 2.87
HCFC1R1-208ENST00000575214 CFAP74Q9C0B2 1584 aa32.96■■■□□ 2.87
HCFC1R1-208ENST00000575214 AKNAQ7Z591 1439 aa32.95■■■□□ 2.86
HCFC1R1-208ENST00000575214 VPS8Q8N3P4 1428 aa32.95■■■□□ 2.86
HCFC1R1-208ENST00000575214 AEBP2Q6ZN18 517 aaPredicted RBP32.93■■■□□ 2.86
HCFC1R1-208ENST00000575214 MYO5CQ9NQX4 1742 aa32.92■■■□□ 2.86
HCFC1R1-208ENST00000575214 RAPGEF3O95398 923 aa32.9■■■□□ 2.86
HCFC1R1-208ENST00000575214 MTUS2Q5JR59 1369 aa32.9■■■□□ 2.86
HCFC1R1-208ENST00000575214 EFCAB2Q5VUJ9 269 aa32.87■■■□□ 2.85
HCFC1R1-208ENST00000575214 DENND4BO75064 1496 aaPredicted RBP32.86■■■□□ 2.85
HCFC1R1-208ENST00000575214 ARHGAP5Q13017 1502 aa32.85■■■□□ 2.85
HCFC1R1-208ENST00000575214 ADGRL1O94910 1474 aa32.82■■■□□ 2.84
HCFC1R1-208ENST00000575214 FRMPD1Q5SYB0 1578 aa32.8■■■□□ 2.84
HCFC1R1-208ENST00000575214 EHBP1L1Q8N3D4 1523 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 203 ms