RNA–Protein interactions for RNA: ENST00000575069.5

P4HB-220, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 2

Gene P4HB, Length 2,453 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-220ENST00000575069 ADAMTS12P58397 1594 aa23.47■■□□□ 1.35
P4HB-220ENST00000575069 CTTNBP2Q8WZ74 1663 aa23.45■■□□□ 1.34
P4HB-220ENST00000575069 SNAPC4Q5SXM2 1469 aa23.42■■□□□ 1.34
P4HB-220ENST00000575069 TTBK1Q5TCY1 1321 aaPredicted RBP23.41■■□□□ 1.34
P4HB-220ENST00000575069 P3H3Q8IVL6 736 aa23.38■■□□□ 1.33
P4HB-220ENST00000575069 APLP2Q06481 763 aa23.33■■□□□ 1.32
P4HB-220ENST00000575069 HRCP23327 699 aa23.32■■□□□ 1.32
P4HB-220ENST00000575069 MAGI1Q96QZ7 1491 aaPredicted RBP23.32■■□□□ 1.32
P4HB-220ENST00000575069 EFCAB5A4FU69 1503 aa23.28■■□□□ 1.32
P4HB-220ENST00000575069 FHOD3Q2V2M9 1422 aa23.28■■□□□ 1.32
P4HB-220ENST00000575069 GRIN2AQ12879 1464 aa23.28■■□□□ 1.32
P4HB-220ENST00000575069 CHMP7Q8WUX9 453 aaPredicted RBP23.27■■□□□ 1.32
P4HB-220ENST00000575069 FBLN2P98095 1184 aa23.26■■□□□ 1.31
P4HB-220ENST00000575069 SYNJ2O15056 1496 aa23.25■■□□□ 1.31
P4HB-220ENST00000575069 IQGAP2Q13576 1575 aa23.22■■□□□ 1.31
P4HB-220ENST00000575069 SAMD9Q5K651 1589 aa23.21■■□□□ 1.31
P4HB-220ENST00000575069 KANK4Q5T7N3 995 aaPredicted RBP23.18■■□□□ 1.3
P4HB-220ENST00000575069 KIAA0586Q9BVV6 1533 aa23.18■■□□□ 1.3
P4HB-220ENST00000575069 CEP170Q5SW79 1584 aa23.14■■□□□ 1.3
P4HB-220ENST00000575069 PCF11O94913 1555 aaKnown RBP23.13■■□□□ 1.29
P4HB-220ENST00000575069 ATP1B4Q9UN42 357 aaPredicted RBP23.13■■□□□ 1.29
P4HB-220ENST00000575069 FMN1Q68DA7 1419 aa23.11■■□□□ 1.29
P4HB-220ENST00000575069 UGGT2Q9NYU1 1516 aa23.1■■□□□ 1.29
P4HB-220ENST00000575069 NUP160Q12769 1436 aa23.09■■□□□ 1.29
P4HB-220ENST00000575069 CASKIN1Q8WXD9 1431 aa23.08■■□□□ 1.29
P4HB-220ENST00000575069 TIAM1Q13009 1591 aa23.06■■□□□ 1.28
P4HB-220ENST00000575069 FYCO1Q9BQS8 1478 aa23.05■■□□□ 1.28
P4HB-220ENST00000575069 MAP3K1Q13233 1512 aa23.04■■□□□ 1.28
P4HB-220ENST00000575069 DISP1Q96F81 1524 aa23.03■■□□□ 1.28
P4HB-220ENST00000575069 CHD1O14646 1710 aa23.01■■□□□ 1.27
P4HB-220ENST00000575069 JPH4Q96JJ6 628 aa23■■□□□ 1.27
P4HB-220ENST00000575069 KIAA0556O60303 1618 aa22.99■■□□□ 1.27
P4HB-220ENST00000575069 CFAP43Q8NDM7 1665 aa22.97■■□□□ 1.27
P4HB-220ENST00000575069 LRRC9Q6ZRR7 1453 aa22.97■■□□□ 1.27
P4HB-220ENST00000575069 LRRIQ1Q96JM4 1722 aa22.93■■□□□ 1.26
P4HB-220ENST00000575069 CARMIL2Q6F5E8 1435 aa22.88■■□□□ 1.25
P4HB-220ENST00000575069 HNRNPUL2Q1KMD3 747 aaKnown RBP22.85■■□□□ 1.25
P4HB-220ENST00000575069 HECW1Q76N89 1606 aa22.84■■□□□ 1.25
P4HB-220ENST00000575069 ARID3CA6NKF2 412 aa22.83■■□□□ 1.24
P4HB-220ENST00000575069 PRG4Q92954 1404 aaPredicted RBP22.82■■□□□ 1.24
P4HB-220ENST00000575069 RRBP1Q9P2E9 1410 aaKnown RBP22.82■■□□□ 1.24
P4HB-220ENST00000575069 PHLDB1Q86UU1 1377 aa22.81■■□□□ 1.24
P4HB-220ENST00000575069 EPRSP07814 1512 aaKnown RBP22.81■■□□□ 1.24
P4HB-220ENST00000575069 MTUS2Q5JR59 1369 aa22.8■■□□□ 1.24
P4HB-220ENST00000575069 CCDC18Q5T9S5 1454 aa22.79■■□□□ 1.24
P4HB-220ENST00000575069 RAPGEF6Q8TEU7 1601 aa22.78■■□□□ 1.24
P4HB-220ENST00000575069 CDK13Q14004 1512 aaKnown RBP22.78■■□□□ 1.24
P4HB-220ENST00000575069 CCNB3Q8WWL7 1395 aa22.77■■□□□ 1.24
P4HB-220ENST00000575069 PLB1Q6P1J6 1458 aa22.76■■□□□ 1.23
P4HB-220ENST00000575069 NUP153P49790 1475 aaKnown RBP22.75■■□□□ 1.23
P4HB-220ENST00000575069 MAGI3Q5TCQ9 1506 aa22.75■■□□□ 1.23
P4HB-220ENST00000575069 SHROOM2Q13796 1616 aa22.75■■□□□ 1.23
P4HB-220ENST00000575069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.74■■□□□ 1.23
P4HB-220ENST00000575069 CLASP1Q7Z460 1538 aa22.71■■□□□ 1.23
P4HB-220ENST00000575069 EHBP1L1Q8N3D4 1523 aa22.7■■□□□ 1.22
P4HB-220ENST00000575069 PTPRGP23470 1445 aa22.68■■□□□ 1.22
P4HB-220ENST00000575069 NCOA2Q15596 1464 aa22.68■■□□□ 1.22
P4HB-220ENST00000575069 ERCC6L2Q5T890 1561 aa22.68■■□□□ 1.22
P4HB-220ENST00000575069 SUPT6HQ7KZ85 1726 aaKnown RBP22.67■■□□□ 1.22
P4HB-220ENST00000575069 ITGAEP38570 1179 aa22.66■■□□□ 1.22
P4HB-220ENST00000575069 ABCA8O94911 1581 aa22.65■■□□□ 1.22
P4HB-220ENST00000575069 FAM50AQ14320 339 aaKnown RBP22.65■■□□□ 1.22
P4HB-220ENST00000575069 CCER1Q8TC90 406 aaPredicted RBP22.63■■□□□ 1.21
P4HB-220ENST00000575069 ARHGEF11O15085 1522 aa22.6■■□□□ 1.21
P4HB-220ENST00000575069 CDK11AQ9UQ88 783 aaPredicted RBP22.6■■□□□ 1.21
P4HB-220ENST00000575069 FGD6Q6ZV73 1430 aa22.6■■□□□ 1.21
P4HB-220ENST00000575069 MYOM3Q5VTT5 1437 aa22.58■■□□□ 1.21
P4HB-220ENST00000575069 ATP10BO94823 1461 aa22.56■■□□□ 1.2
P4HB-220ENST00000575069 ZEB1P37275 1124 aaPredicted RBP22.56■■□□□ 1.2
P4HB-220ENST00000575069 OSCARQ8IYS5 282 aa22.54■■□□□ 1.2
P4HB-220ENST00000575069 UACAQ9BZF9 1416 aa22.53■■□□□ 1.2
P4HB-220ENST00000575069 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.53■■□□□ 1.2
P4HB-220ENST00000575069 TROQ12816 1431 aaPredicted RBP22.52■■□□□ 1.2
P4HB-220ENST00000575069 PLEKHD1A6NEE1 506 aa22.49■■□□□ 1.19
P4HB-220ENST00000575069 PTPN23Q9H3S7 1636 aa22.47■■□□□ 1.19
P4HB-220ENST00000575069 KIF14Q15058 1648 aa22.44■■□□□ 1.18
P4HB-220ENST00000575069 ABCC2Q92887 1545 aa22.44■■□□□ 1.18
P4HB-220ENST00000575069 MIA2Q96PC5 1412 aa22.42■■□□□ 1.18
P4HB-220ENST00000575069 ADCY10Q96PN6 1610 aa22.41■■□□□ 1.18
P4HB-220ENST00000575069 TCOF1Q13428 1488 aaKnown RBP22.41■■□□□ 1.18
P4HB-220ENST00000575069 PTPRKQ15262 1439 aa22.41■■□□□ 1.18
P4HB-220ENST00000575069 RAB3GAP2Q9H2M9 1393 aa22.37■■□□□ 1.17
P4HB-220ENST00000575069 SETD5Q9C0A6 1442 aa22.37■■□□□ 1.17
P4HB-220ENST00000575069 UHRF1BP1LA0JNW5 1464 aa22.36■■□□□ 1.17
P4HB-220ENST00000575069 ZNF644Q9H582 1327 aaPredicted RBP22.36■■□□□ 1.17
P4HB-220ENST00000575069 GPATCH8Q9UKJ3 1502 aaKnown RBP22.35■■□□□ 1.17
P4HB-220ENST00000575069 ABCC10Q5T3U5 1492 aa22.33■■□□□ 1.17
P4HB-220ENST00000575069 CFDP1Q9UEE9 299 aaPredicted RBP22.33■■□□□ 1.17
P4HB-220ENST00000575069 DHX57Q6P158 1386 aaKnown RBP22.33■■□□□ 1.16
P4HB-220ENST00000575069 ZCCHC11Q5TAX3 1644 aaKnown RBP22.3■■□□□ 1.16
P4HB-220ENST00000575069 KDM5BQ9UGL1 1544 aa22.3■■□□□ 1.16
P4HB-220ENST00000575069 ITSN2Q9NZM3 1697 aa22.3■■□□□ 1.16
P4HB-220ENST00000575069 CHIC2Q9UKJ5 165 aa22.3■■□□□ 1.16
P4HB-220ENST00000575069 ZNF777Q9ULD5 760 aaPredicted RBP22.29■■□□□ 1.16
P4HB-220ENST00000575069 CDC42BPAQ5VT25 1732 aa22.28■■□□□ 1.16
P4HB-220ENST00000575069 KCNH8Q96L42 1107 aa22.25■■□□□ 1.15
P4HB-220ENST00000575069 HFM1A2PYH4 1435 aa22.24■■□□□ 1.15
P4HB-220ENST00000575069 CAMSAP2Q08AD1 1489 aa22.24■■□□□ 1.15
P4HB-220ENST00000575069 RRP7BPQ9NSQ0 103 aa22.23■■□□□ 1.15
P4HB-220ENST00000575069 ABCC5O15440 1437 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms