RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-231	ENST00000574875	TRH	P20396	242 aa	Predicted RBP	33.22	■■■□□ 2.91
ABR-231	ENST00000574875	PRG4	Q92954	1404 aa	Predicted RBP	33.21	■■■□□ 2.91
ABR-231	ENST00000574875	RUSC2	Q8N2Y8	1516 aa		33.17	■■■□□ 2.9
ABR-231	ENST00000574875	KIAA0586	Q9BVV6	1533 aa		33.14	■■■□□ 2.9
ABR-231	ENST00000574875	RAPGEF2	Q9Y4G8	1499 aa		32.97	■■■□□ 2.87
ABR-231	ENST00000574875	IQGAP2	Q13576	1575 aa		32.85	■■■□□ 2.85
ABR-231	ENST00000574875	CARMIL2	Q6F5E8	1435 aa		32.83	■■■□□ 2.85
ABR-231	ENST00000574875	NPM1	P06748	294 aa	Known RBP eCLIP	32.81	■■■□□ 2.84
ABR-231	ENST00000574875	PTPRG	P23470	1445 aa		32.78	■■■□□ 2.84
ABR-231	ENST00000574875	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.77	■■■□□ 2.84
ABR-231	ENST00000574875	TNIK	Q9UKE5	1360 aa		32.74	■■■□□ 2.83
ABR-231	ENST00000574875	PRX	Q9BXM0	1461 aa		32.74	■■■□□ 2.83
ABR-231	ENST00000574875	CSRNP3	Q8WYN3	585 aa		32.72	■■■□□ 2.83
ABR-231	ENST00000574875	ADCY10	Q96PN6	1610 aa		32.69	■■■□□ 2.82
ABR-231	ENST00000574875	DISP1	Q96F81	1524 aa		32.67	■■■□□ 2.82
ABR-231	ENST00000574875	UGGT2	Q9NYU1	1516 aa		32.67	■■■□□ 2.82
ABR-231	ENST00000574875	CTTNBP2	Q8WZ74	1663 aa		32.61	■■■□□ 2.81
ABR-231	ENST00000574875	EEA1	Q15075	1411 aa		32.58	■■■□□ 2.81
ABR-231	ENST00000574875	MAPKBP1	O60336	1514 aa		32.56	■■■□□ 2.8
ABR-231	ENST00000574875	CHIC1	Q5VXU3	224 aa		32.55	■■■□□ 2.8
ABR-231	ENST00000574875	FAM69C	Q0P6D2	419 aa		32.54	■■■□□ 2.8
ABR-231	ENST00000574875	KIAA0556	O60303	1618 aa		32.53	■■■□□ 2.8
ABR-231	ENST00000574875	FAM9A	Q8IZU1	332 aa	Predicted RBP	32.53	■■■□□ 2.8
ABR-231	ENST00000574875	KIF13A	Q9H1H9	1805 aa		32.53	■■■□□ 2.8
ABR-231	ENST00000574875	UACA	Q9BZF9	1416 aa		32.52	■■■□□ 2.8
ABR-231	ENST00000574875	ABCC10	Q5T3U5	1492 aa		32.51	■■■□□ 2.79
ABR-231	ENST00000574875	UHRF1BP1L	A0JNW5	1464 aa		32.48	■■■□□ 2.79
ABR-231	ENST00000574875	GOLGA3	Q08378	1498 aa		32.48	■■■□□ 2.79
ABR-231	ENST00000574875	ABCC2	Q92887	1545 aa		32.48	■■■□□ 2.79
ABR-231	ENST00000574875	DIP2B	Q9P265	1576 aa		32.39	■■■□□ 2.78
ABR-231	ENST00000574875	P3H3	Q8IVL6	736 aa		32.34	■■■□□ 2.77
ABR-231	ENST00000574875	ASXL2	Q76L83	1435 aa		32.34	■■■□□ 2.77
ABR-231	ENST00000574875	KDM5B	Q9UGL1	1544 aa		32.33	■■■□□ 2.77
ABR-231	ENST00000574875	PLB1	Q6P1J6	1458 aa		32.33	■■■□□ 2.77
ABR-231	ENST00000574875	KIF21B	O75037	1637 aa		32.23	■■■□□ 2.75
ABR-231	ENST00000574875	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.23	■■■□□ 2.75
ABR-231	ENST00000574875	RANGAP1	P46060	587 aa	Predicted RBP	32.23	■■■□□ 2.75
ABR-231	ENST00000574875	ABCA8	O94911	1581 aa		32.23	■■■□□ 2.75
ABR-231	ENST00000574875	TSPOAP1	O95153	1857 aa		32.2	■■■□□ 2.75
ABR-231	ENST00000574875	SAMD9	Q5K651	1589 aa		32.17	■■■□□ 2.74
ABR-231	ENST00000574875	GLI2	P10070	1586 aa		32.16	■■■□□ 2.74
ABR-231	ENST00000574875	EHMT2	Q96KQ7	1210 aa		32.15	■■■□□ 2.74
ABR-231	ENST00000574875	EPRS	P07814	1512 aa	Known RBP	32.13	■■■□□ 2.73
ABR-231	ENST00000574875	UBTF	P17480	764 aa	Known RBP	32.13	■■■□□ 2.73
ABR-231	ENST00000574875	WDR7	Q9Y4E6	1490 aa		32.08	■■■□□ 2.73
ABR-231	ENST00000574875	ARID3C	A6NKF2	412 aa		32.06	■■■□□ 2.72
ABR-231	ENST00000574875	KCNH8	Q96L42	1107 aa		32.06	■■■□□ 2.72
ABR-231	ENST00000574875	FHOD3	Q2V2M9	1422 aa		32.02	■■■□□ 2.72
ABR-231	ENST00000574875	ATP10B	O94823	1461 aa		32.02	■■■□□ 2.72
ABR-231	ENST00000574875	KDM6B	O15054	1643 aa		32	■■■□□ 2.71
ABR-231	ENST00000574875	PPRC1	Q5VV67	1664 aa	Known RBP	31.99	■■■□□ 2.71
ABR-231	ENST00000574875	MAP3K4	Q9Y6R4	1608 aa		31.98	■■■□□ 2.71
ABR-231	ENST00000574875	RAPGEF6	Q8TEU7	1601 aa		31.97	■■■□□ 2.71
ABR-231	ENST00000574875	EFCAB5	A4FU69	1503 aa		31.96	■■■□□ 2.71
ABR-231	ENST00000574875	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	31.94	■■■□□ 2.7
ABR-231	ENST00000574875	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31.94	■■■□□ 2.7
ABR-231	ENST00000574875	AEBP2	Q6ZN18	517 aa	Predicted RBP	31.93	■■■□□ 2.7
ABR-231	ENST00000574875	TEX14	Q8IWB6	1497 aa		31.9	■■■□□ 2.7
ABR-231	ENST00000574875	CD109	Q6YHK3	1445 aa		31.89	■■■□□ 2.7
ABR-231	ENST00000574875	NUP153	P49790	1475 aa	Known RBP	31.86	■■■□□ 2.69
ABR-231	ENST00000574875	CFAP43	Q8NDM7	1665 aa		31.83	■■■□□ 2.69
ABR-231	ENST00000574875	MAGI3	Q5TCQ9	1506 aa		31.8	■■■□□ 2.68
ABR-231	ENST00000574875	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.79	■■■□□ 2.68
ABR-231	ENST00000574875	ARHGAP35	Q9NRY4	1499 aa		31.78	■■■□□ 2.68
ABR-231	ENST00000574875	PLEKHD1	A6NEE1	506 aa		31.78	■■■□□ 2.68
ABR-231	ENST00000574875	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.73	■■■□□ 2.67
ABR-231	ENST00000574875	FMN1	Q68DA7	1419 aa		31.73	■■■□□ 2.67
ABR-231	ENST00000574875	ABCA9	Q8IUA7	1624 aa		31.68	■■■□□ 2.66
ABR-231	ENST00000574875	CDK13	Q14004	1512 aa	Known RBP	31.59	■■■□□ 2.65
ABR-231	ENST00000574875	PHLDB1	Q86UU1	1377 aa		31.58	■■■□□ 2.65
ABR-231	ENST00000574875	HECW1	Q76N89	1606 aa		31.57	■■■□□ 2.64
ABR-231	ENST00000574875	KDM4F	A0A1W2PPD8	638 aa		31.56	■■■□□ 2.64
ABR-231	ENST00000574875	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.55	■■■□□ 2.64
ABR-231	ENST00000574875	ARAP3	Q8WWN8	1544 aa		31.54	■■■□□ 2.64
ABR-231	ENST00000574875	NEO1	Q92859	1461 aa		31.5	■■■□□ 2.63
ABR-231	ENST00000574875	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.49	■■■□□ 2.63
ABR-231	ENST00000574875	CLIP1	P30622	1438 aa		31.48	■■■□□ 2.63
ABR-231	ENST00000574875	RAPGEF3	O95398	923 aa		31.44	■■■□□ 2.62
ABR-231	ENST00000574875	CASKIN1	Q8WXD9	1431 aa		31.43	■■■□□ 2.62
ABR-231	ENST00000574875	TTC37	Q6PGP7	1564 aa		31.4	■■■□□ 2.62
ABR-231	ENST00000574875	LRRIQ1	Q96JM4	1722 aa		31.38	■■■□□ 2.61
ABR-231	ENST00000574875	AKNA	Q7Z591	1439 aa		31.38	■■■□□ 2.61
ABR-231	ENST00000574875	FANCA	O15360	1455 aa		31.38	■■■□□ 2.61
ABR-231	ENST00000574875	TRO	Q12816	1431 aa	Predicted RBP	31.36	■■■□□ 2.61
ABR-231	ENST00000574875	PCF11	O94913	1555 aa	Known RBP	31.35	■■■□□ 2.61
ABR-231	ENST00000574875	ADGRL1	O94910	1474 aa		31.34	■■■□□ 2.61
ABR-231	ENST00000574875	PLCH2	O75038	1416 aa		31.34	■■■□□ 2.61
ABR-231	ENST00000574875	CCDC18	Q5T9S5	1454 aa		31.33	■■■□□ 2.61
ABR-231	ENST00000574875	CFAP74	Q9C0B2	1584 aa		31.31	■■■□□ 2.6
ABR-231	ENST00000574875	DENND4B	O75064	1496 aa	Predicted RBP	31.3	■■■□□ 2.6
ABR-231	ENST00000574875	FYCO1	Q9BQS8	1478 aa		31.29	■■■□□ 2.6
ABR-231	ENST00000574875	EFCAB2	Q5VUJ9	269 aa		31.29	■■■□□ 2.6
ABR-231	ENST00000574875	KIF14	Q15058	1648 aa		31.27	■■■□□ 2.6
ABR-231	ENST00000574875	LOC105371045	A0A1W2PR82	267 aa		31.26	■■■□□ 2.59
ABR-231	ENST00000574875	FRMPD1	Q5SYB0	1578 aa		31.24	■■■□□ 2.59
ABR-231	ENST00000574875	MYO5C	Q9NQX4	1742 aa		31.24	■■■□□ 2.59
ABR-231	ENST00000574875	CEP162	Q5TB80	1403 aa		31.23	■■■□□ 2.59
ABR-231	ENST00000574875	SCAPER	Q9BY12	1400 aa		31.2	■■■□□ 2.59
ABR-231	ENST00000574875	RICTOR	Q6R327	1708 aa		31.2	■■■□□ 2.58
ABR-231	ENST00000574875	ARHGAP5	Q13017	1502 aa		31.14	■■■□□ 2.57

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