RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 KIAA0586Q9BVV6 1533 aa40.51■■■■■ 4.08
LITAF-213ENST00000574701 PRXQ9BXM0 1461 aa40.49■■■■■ 4.07
LITAF-213ENST00000574701 CSRNP3Q8WYN3 585 aa40.48■■■■■ 4.07
LITAF-213ENST00000574701 ARAP1Q96P48 1450 aa40.43■■■■■ 4.06
LITAF-213ENST00000574701 FAM9AQ8IZU1 332 aaPredicted RBP40.4■■■■■ 4.06
LITAF-213ENST00000574701 JPH4Q96JJ6 628 aa40.38■■■■■ 4.05
LITAF-213ENST00000574701 IQGAP2Q13576 1575 aa40.36■■■■■ 4.05
LITAF-213ENST00000574701 ERCC6L2Q5T890 1561 aa40.35■■■■■ 4.05
LITAF-213ENST00000574701 PRG4Q92954 1404 aaPredicted RBP40.34■■■■■ 4.05
LITAF-213ENST00000574701 CTTNBP2Q8WZ74 1663 aa40.33■■■■■ 4.05
LITAF-213ENST00000574701 CYB5RLQ6IPT4 315 aa40.3■■■■■ 4.04
LITAF-213ENST00000574701 KIF21BO75037 1637 aa40.23■■■■■ 4.03
LITAF-213ENST00000574701 CARMIL2Q6F5E8 1435 aa40.12■■■■■ 4.01
LITAF-213ENST00000574701 UGGT2Q9NYU1 1516 aa40.11■■■■■ 4.01
LITAF-213ENST00000574701 GOLGA3Q08378 1498 aa40■■■■□ 3.99
LITAF-213ENST00000574701 DISP1Q96F81 1524 aa39.99■■■■□ 3.99
LITAF-213ENST00000574701 KIAA0556O60303 1618 aa39.98■■■■□ 3.99
LITAF-213ENST00000574701 TNIKQ9UKE5 1360 aa39.94■■■■□ 3.98
LITAF-213ENST00000574701 PTPRGP23470 1445 aa39.89■■■■□ 3.98
LITAF-213ENST00000574701 EHMT2Q96KQ7 1210 aa39.86■■■■□ 3.97
LITAF-213ENST00000574701 UBTFP17480 764 aaKnown RBP39.83■■■■□ 3.97
LITAF-213ENST00000574701 TTBK1Q5TCY1 1321 aaPredicted RBP39.83■■■■□ 3.97
LITAF-213ENST00000574701 SAMD9Q5K651 1589 aa39.76■■■■□ 3.95
LITAF-213ENST00000574701 ADCY10Q96PN6 1610 aa39.73■■■■□ 3.95
LITAF-213ENST00000574701 RANGAP1P46060 587 aaPredicted RBP39.68■■■■□ 3.94
LITAF-213ENST00000574701 EFCAB5A4FU69 1503 aa39.65■■■■□ 3.94
LITAF-213ENST00000574701 UACAQ9BZF9 1416 aa39.64■■■■□ 3.94
LITAF-213ENST00000574701 NPM1P06748 294 aaKnown RBP eCLIP39.61■■■■□ 3.93
LITAF-213ENST00000574701 P3H3Q8IVL6 736 aa39.61■■■■□ 3.93
LITAF-213ENST00000574701 UHRF1BP1LA0JNW5 1464 aa39.6■■■■□ 3.93
LITAF-213ENST00000574701 ABCC2Q92887 1545 aa39.6■■■■□ 3.93
LITAF-213ENST00000574701 PLB1Q6P1J6 1458 aa39.5■■■■□ 3.91
LITAF-213ENST00000574701 FHOD3Q2V2M9 1422 aa39.5■■■■□ 3.91
LITAF-213ENST00000574701 ABCA8O94911 1581 aa39.49■■■■□ 3.91
LITAF-213ENST00000574701 TRHP20396 242 aaPredicted RBP39.48■■■■□ 3.91
LITAF-213ENST00000574701 MAPKBP1O60336 1514 aa39.47■■■■□ 3.91
LITAF-213ENST00000574701 ARHGAP35Q9NRY4 1499 aa39.4■■■■□ 3.9
LITAF-213ENST00000574701 KDM5BQ9UGL1 1544 aa39.4■■■■□ 3.9
LITAF-213ENST00000574701 ZCCHC11Q5TAX3 1644 aaKnown RBP39.36■■■■□ 3.89
LITAF-213ENST00000574701 RAPGEF6Q8TEU7 1601 aa39.36■■■■□ 3.89
LITAF-213ENST00000574701 CLIP1P30622 1438 aa39.25■■■■□ 3.87
LITAF-213ENST00000574701 FMN1Q68DA7 1419 aa39.25■■■■□ 3.87
LITAF-213ENST00000574701 ASXL2Q76L83 1435 aa39.24■■■■□ 3.87
LITAF-213ENST00000574701 ABCC10Q5T3U5 1492 aa39.23■■■■□ 3.87
LITAF-213ENST00000574701 KIF13AQ9H1H9 1805 aa39.22■■■■□ 3.87
LITAF-213ENST00000574701 DIP2BQ9P265 1576 aa39.21■■■■□ 3.87
LITAF-213ENST00000574701 NUP153P49790 1475 aaKnown RBP39.16■■■■□ 3.86
LITAF-213ENST00000574701 ARID3CA6NKF2 412 aa39.14■■■■□ 3.86
LITAF-213ENST00000574701 LOC105371045A0A1W2PR82 267 aa39.13■■■■□ 3.85
LITAF-213ENST00000574701 ATP10BO94823 1461 aa39.12■■■■□ 3.85
LITAF-213ENST00000574701 WDR7Q9Y4E6 1490 aa39.11■■■■□ 3.85
LITAF-213ENST00000574701 FAM69CQ0P6D2 419 aa39.11■■■■□ 3.85
LITAF-213ENST00000574701 CEP162Q5TB80 1403 aa39.11■■■■□ 3.85
LITAF-213ENST00000574701 HECW1Q76N89 1606 aa39.11■■■■□ 3.85
LITAF-213ENST00000574701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.04■■■■□ 3.84
LITAF-213ENST00000574701 HNRNPUL2Q1KMD3 747 aaKnown RBP39.04■■■■□ 3.84
LITAF-213ENST00000574701 EPRSP07814 1512 aaKnown RBP39.02■■■■□ 3.84
LITAF-213ENST00000574701 GLI2P10070 1586 aa39.02■■■■□ 3.84
LITAF-213ENST00000574701 ATP1B4Q9UN42 357 aaPredicted RBP38.99■■■■□ 3.83
LITAF-213ENST00000574701 PCF11O94913 1555 aaKnown RBP38.98■■■■□ 3.83
LITAF-213ENST00000574701 CASKIN1Q8WXD9 1431 aa38.93■■■■□ 3.82
LITAF-213ENST00000574701 CDK13Q14004 1512 aaKnown RBP38.93■■■■□ 3.82
LITAF-213ENST00000574701 FYCO1Q9BQS8 1478 aa38.89■■■■□ 3.82
LITAF-213ENST00000574701 TSPOAP1O95153 1857 aa38.89■■■■□ 3.82
LITAF-213ENST00000574701 KCNH8Q96L42 1107 aa38.87■■■■□ 3.81
LITAF-213ENST00000574701 MAP3K4Q9Y6R4 1608 aa38.86■■■■□ 3.81
LITAF-213ENST00000574701 PLEKHD1A6NEE1 506 aa38.83■■■■□ 3.81
LITAF-213ENST00000574701 CCDC18Q5T9S5 1454 aa38.83■■■■□ 3.81
LITAF-213ENST00000574701 LRRIQ1Q96JM4 1722 aa38.83■■■■□ 3.81
LITAF-213ENST00000574701 CFAP43Q8NDM7 1665 aa38.82■■■■□ 3.81
LITAF-213ENST00000574701 CDK11AQ9UQ88 783 aaPredicted RBP38.75■■■■□ 3.79
LITAF-213ENST00000574701 PPRC1Q5VV67 1664 aaKnown RBP38.74■■■■□ 3.79
LITAF-213ENST00000574701 ABCA9Q8IUA7 1624 aa38.73■■■■□ 3.79
LITAF-213ENST00000574701 TEX14Q8IWB6 1497 aa38.7■■■■□ 3.79
LITAF-213ENST00000574701 CD109Q6YHK3 1445 aa38.7■■■■□ 3.79
LITAF-213ENST00000574701 VPS8Q8N3P4 1428 aa38.63■■■■□ 3.78
LITAF-213ENST00000574701 MAGI3Q5TCQ9 1506 aa38.63■■■■□ 3.77
LITAF-213ENST00000574701 TROQ12816 1431 aaPredicted RBP38.62■■■■□ 3.77
LITAF-213ENST00000574701 KIF14Q15058 1648 aa38.6■■■■□ 3.77
LITAF-213ENST00000574701 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.58■■■■□ 3.77
LITAF-213ENST00000574701 KDM6BO15054 1643 aa38.57■■■■□ 3.77
LITAF-213ENST00000574701 TTC37Q6PGP7 1564 aa38.55■■■■□ 3.76
LITAF-213ENST00000574701 MYO5CQ9NQX4 1742 aa38.43■■■■□ 3.74
LITAF-213ENST00000574701 CFAP74Q9C0B2 1584 aa38.41■■■■□ 3.74
LITAF-213ENST00000574701 MTUS2Q5JR59 1369 aa38.41■■■■□ 3.74
LITAF-213ENST00000574701 EHBP1L1Q8N3D4 1523 aa38.39■■■■□ 3.74
LITAF-213ENST00000574701 NEO1Q92859 1461 aa38.39■■■■□ 3.74
LITAF-213ENST00000574701 TIAM1Q13009 1591 aa38.39■■■■□ 3.74
LITAF-213ENST00000574701 PHLDB1Q86UU1 1377 aa38.35■■■■□ 3.73
LITAF-213ENST00000574701 PLCH2O75038 1416 aa38.33■■■■□ 3.73
LITAF-213ENST00000574701 FANCAO15360 1455 aa38.33■■■■□ 3.73
LITAF-213ENST00000574701 ARAP3Q8WWN8 1544 aa38.32■■■■□ 3.72
LITAF-213ENST00000574701 COL17A1Q9UMD9 1497 aaPredicted RBP38.28■■■■□ 3.72
LITAF-213ENST00000574701 MAP3K1Q13233 1512 aa38.28■■■■□ 3.72
LITAF-213ENST00000574701 PREX2Q70Z35 1606 aa38.26■■■■□ 3.71
LITAF-213ENST00000574701 ARHGAP5Q13017 1502 aa38.25■■■■□ 3.71
LITAF-213ENST00000574701 APLP2Q06481 763 aa38.23■■■■□ 3.71
LITAF-213ENST00000574701 AKNAQ7Z591 1439 aa38.22■■■■□ 3.71
LITAF-213ENST00000574701 CDC42BPAQ5VT25 1732 aa38.21■■■■□ 3.71
LITAF-213ENST00000574701 SUPT6HQ7KZ85 1726 aaKnown RBP38.21■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms