RNA–Protein interactions for RNA: ENST00000574202.1

ATP2A3-213, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 230 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-213ENST00000574202 TNIKQ9UKE5 1360 aa18.84■□□□□ 0.61
ATP2A3-213ENST00000574202 FBLN2P98095 1184 aa18.83■□□□□ 0.6
ATP2A3-213ENST00000574202 CTTNBP2Q8WZ74 1663 aa18.76■□□□□ 0.59
ATP2A3-213ENST00000574202 OSCARQ8IYS5 282 aa18.75■□□□□ 0.59
ATP2A3-213ENST00000574202 KIAA0586Q9BVV6 1533 aa18.74■□□□□ 0.59
ATP2A3-213ENST00000574202 SHROOM2Q13796 1616 aa18.74■□□□□ 0.59
ATP2A3-213ENST00000574202 CEP162Q5TB80 1403 aa18.72■□□□□ 0.59
ATP2A3-213ENST00000574202 IQGAP2Q13576 1575 aa18.7■□□□□ 0.58
ATP2A3-213ENST00000574202 RANGAP1P46060 587 aaPredicted RBP18.69■□□□□ 0.58
ATP2A3-213ENST00000574202 CLIP1P30622 1438 aa18.66■□□□□ 0.58
ATP2A3-213ENST00000574202 UGGT2Q9NYU1 1516 aa18.64■□□□□ 0.58
ATP2A3-213ENST00000574202 ERCC6L2Q5T890 1561 aa18.64■□□□□ 0.58
ATP2A3-213ENST00000574202 DISP1Q96F81 1524 aa18.59■□□□□ 0.57
ATP2A3-213ENST00000574202 SAMD9Q5K651 1589 aa18.59■□□□□ 0.57
ATP2A3-213ENST00000574202 ARHGEF11O15085 1522 aa18.59■□□□□ 0.57
ATP2A3-213ENST00000574202 JPH4Q96JJ6 628 aa18.58■□□□□ 0.56
ATP2A3-213ENST00000574202 RIMBP3CA6NJZ7 1639 aa18.57■□□□□ 0.56
ATP2A3-213ENST00000574202 RIMBP3BA6NNM3 1639 aa18.57■□□□□ 0.56
ATP2A3-213ENST00000574202 RIMBP3Q9UFD9 1639 aa18.57■□□□□ 0.56
ATP2A3-213ENST00000574202 PRG4Q92954 1404 aaPredicted RBP18.57■□□□□ 0.56
ATP2A3-213ENST00000574202 EFCAB5A4FU69 1503 aa18.56■□□□□ 0.56
ATP2A3-213ENST00000574202 KIAA0556O60303 1618 aa18.56■□□□□ 0.56
ATP2A3-213ENST00000574202 ARHGAP35Q9NRY4 1499 aa18.55■□□□□ 0.56
ATP2A3-213ENST00000574202 DNAJC5Q9H3Z4 198 aa18.55■□□□□ 0.56
ATP2A3-213ENST00000574202 P3H3Q8IVL6 736 aa18.5■□□□□ 0.55
ATP2A3-213ENST00000574202 ARAP1Q96P48 1450 aa18.5■□□□□ 0.55
ATP2A3-213ENST00000574202 FHOD3Q2V2M9 1422 aa18.46■□□□□ 0.55
ATP2A3-213ENST00000574202 CARMIL2Q6F5E8 1435 aa18.45■□□□□ 0.54
ATP2A3-213ENST00000574202 VPS8Q8N3P4 1428 aa18.44■□□□□ 0.54
ATP2A3-213ENST00000574202 FMN1Q68DA7 1419 aa18.39■□□□□ 0.53
ATP2A3-213ENST00000574202 ABCA8O94911 1581 aa18.35■□□□□ 0.53
ATP2A3-213ENST00000574202 PTPRGP23470 1445 aa18.35■□□□□ 0.53
ATP2A3-213ENST00000574202 TTBK1Q5TCY1 1321 aaPredicted RBP18.34■□□□□ 0.53
ATP2A3-213ENST00000574202 ADCY10Q96PN6 1610 aa18.33■□□□□ 0.52
ATP2A3-213ENST00000574202 PCF11O94913 1555 aaKnown RBP18.32■□□□□ 0.52
ATP2A3-213ENST00000574202 PLB1Q6P1J6 1458 aa18.32■□□□□ 0.52
ATP2A3-213ENST00000574202 UHRF1BP1LA0JNW5 1464 aa18.3■□□□□ 0.52
ATP2A3-213ENST00000574202 CASKIN1Q8WXD9 1431 aa18.3■□□□□ 0.52
ATP2A3-213ENST00000574202 FYCO1Q9BQS8 1478 aa18.29■□□□□ 0.52
ATP2A3-213ENST00000574202 APLP2Q06481 763 aa18.29■□□□□ 0.52
ATP2A3-213ENST00000574202 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
ATP2A3-213ENST00000574202 ABCC2Q92887 1545 aa18.28■□□□□ 0.52
ATP2A3-213ENST00000574202 RAPGEF6Q8TEU7 1601 aa18.28■□□□□ 0.52
ATP2A3-213ENST00000574202 UACAQ9BZF9 1416 aa18.27■□□□□ 0.52
ATP2A3-213ENST00000574202 CYB5RLQ6IPT4 315 aa18.26■□□□□ 0.51
ATP2A3-213ENST00000574202 HECW1Q76N89 1606 aa18.24■□□□□ 0.51
ATP2A3-213ENST00000574202 NUP153P49790 1475 aaKnown RBP18.24■□□□□ 0.51
ATP2A3-213ENST00000574202 LRRIQ1Q96JM4 1722 aa18.23■□□□□ 0.51
ATP2A3-213ENST00000574202 KDM5BQ9UGL1 1544 aa18.21■□□□□ 0.51
ATP2A3-213ENST00000574202 MAP3K1Q13233 1512 aa18.18■□□□□ 0.5
ATP2A3-213ENST00000574202 TIAM1Q13009 1591 aa18.18■□□□□ 0.5
ATP2A3-213ENST00000574202 PPARGC1BQ86YN6 1023 aaKnown RBP18.18■□□□□ 0.5
ATP2A3-213ENST00000574202 ZCCHC11Q5TAX3 1644 aaKnown RBP18.18■□□□□ 0.5
ATP2A3-213ENST00000574202 CFAP43Q8NDM7 1665 aa18.18■□□□□ 0.5
ATP2A3-213ENST00000574202 CCDC18Q5T9S5 1454 aa18.17■□□□□ 0.5
ATP2A3-213ENST00000574202 ATP10BO94823 1461 aa18.15■□□□□ 0.5
ATP2A3-213ENST00000574202 EPRSP07814 1512 aaKnown RBP18.15■□□□□ 0.5
ATP2A3-213ENST00000574202 ARID3CA6NKF2 412 aa18.14■□□□□ 0.49
ATP2A3-213ENST00000574202 CDK13Q14004 1512 aaKnown RBP18.13■□□□□ 0.49
ATP2A3-213ENST00000574202 MAPKBP1O60336 1514 aa18.12■□□□□ 0.49
ATP2A3-213ENST00000574202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.1■□□□□ 0.49
ATP2A3-213ENST00000574202 HNRNPUL2Q1KMD3 747 aaKnown RBP18.1■□□□□ 0.49
ATP2A3-213ENST00000574202 KANK4Q5T7N3 995 aaPredicted RBP18.1■□□□□ 0.49
ATP2A3-213ENST00000574202 LRRC9Q6ZRR7 1453 aa18.08■□□□□ 0.49
ATP2A3-213ENST00000574202 MAGI3Q5TCQ9 1506 aa18.07■□□□□ 0.48
ATP2A3-213ENST00000574202 MTUS2Q5JR59 1369 aa18.05■□□□□ 0.48
ATP2A3-213ENST00000574202 CDK11AQ9UQ88 783 aaPredicted RBP18.05■□□□□ 0.48
ATP2A3-213ENST00000574202 ASXL2Q76L83 1435 aa18.04■□□□□ 0.48
ATP2A3-213ENST00000574202 EHBP1L1Q8N3D4 1523 aa18.03■□□□□ 0.48
ATP2A3-213ENST00000574202 WDR7Q9Y4E6 1490 aa18.01■□□□□ 0.47
ATP2A3-213ENST00000574202 PLEKHD1A6NEE1 506 aa17.99■□□□□ 0.47
ATP2A3-213ENST00000574202 DIP2BQ9P265 1576 aa17.99■□□□□ 0.47
ATP2A3-213ENST00000574202 SUPT6HQ7KZ85 1726 aaKnown RBP17.98■□□□□ 0.47
ATP2A3-213ENST00000574202 NPM1P06748 294 aaKnown RBP eCLIP17.97■□□□□ 0.47
ATP2A3-213ENST00000574202 TROQ12816 1431 aaPredicted RBP17.97■□□□□ 0.47
ATP2A3-213ENST00000574202 ABCC10Q5T3U5 1492 aa17.96■□□□□ 0.47
ATP2A3-213ENST00000574202 KIF13AQ9H1H9 1805 aa17.96■□□□□ 0.47
ATP2A3-213ENST00000574202 KIF14Q15058 1648 aa17.95■□□□□ 0.46
ATP2A3-213ENST00000574202 TRIM26Q12899 539 aaPredicted RBP17.94■□□□□ 0.46
ATP2A3-213ENST00000574202 GLI2P10070 1586 aa17.94■□□□□ 0.46
ATP2A3-213ENST00000574202 NCOA2Q15596 1464 aa17.93■□□□□ 0.46
ATP2A3-213ENST00000574202 TTC37Q6PGP7 1564 aa17.91■□□□□ 0.46
ATP2A3-213ENST00000574202 ABCA9Q8IUA7 1624 aa17.9■□□□□ 0.46
ATP2A3-213ENST00000574202 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.9■□□□□ 0.466e-6■■■■□ 21.5
ATP2A3-213ENST00000574202 MAP3K4Q9Y6R4 1608 aa17.89■□□□□ 0.45
ATP2A3-213ENST00000574202 PHLDB1Q86UU1 1377 aa17.89■□□□□ 0.45
ATP2A3-213ENST00000574202 PPRC1Q5VV67 1664 aaKnown RBP17.86■□□□□ 0.45
ATP2A3-213ENST00000574202 CCNB3Q8WWL7 1395 aa17.85■□□□□ 0.45
ATP2A3-213ENST00000574202 MYOM3Q5VTT5 1437 aa17.84■□□□□ 0.45
ATP2A3-213ENST00000574202 KCNH8Q96L42 1107 aa17.84■□□□□ 0.45
ATP2A3-213ENST00000574202 PCGF6Q9BYE7 350 aa17.83■□□□□ 0.44
ATP2A3-213ENST00000574202 RRBP1Q9P2E9 1410 aaKnown RBP17.82■□□□□ 0.44
ATP2A3-213ENST00000574202 ITSN2Q9NZM3 1697 aa17.81■□□□□ 0.44
ATP2A3-213ENST00000574202 CDC42BPAQ5VT25 1732 aa17.81■□□□□ 0.44
ATP2A3-213ENST00000574202 FGD6Q6ZV73 1430 aa17.81■□□□□ 0.44
ATP2A3-213ENST00000574202 FAM69CQ0P6D2 419 aa17.8■□□□□ 0.44
ATP2A3-213ENST00000574202 PREX2Q70Z35 1606 aa17.8■□□□□ 0.44
ATP2A3-213ENST00000574202 MYO5CQ9NQX4 1742 aa17.78■□□□□ 0.44
ATP2A3-213ENST00000574202 ARAP3Q8WWN8 1544 aa17.77■□□□□ 0.44
ATP2A3-213ENST00000574202 GPATCH8Q9UKJ3 1502 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms