RNA–Protein interactions for RNA: ENST00000574085.5

TRPV1-208, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 2

Gene TRPV1, Length 2,644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-208ENST00000574085 PRXQ9BXM0 1461 aa17.88■□□□□ 0.45
TRPV1-208ENST00000574085 FANCIQ9NVI1 1328 aa17.87■□□□□ 0.45
TRPV1-208ENST00000574085 TOP2BQ02880 1626 aa17.86■□□□□ 0.45
TRPV1-208ENST00000574085 ANP32CO43423 234 aa17.85■□□□□ 0.45
TRPV1-208ENST00000574085 SIN3AQ96ST3 1273 aa17.85■□□□□ 0.45
TRPV1-208ENST00000574085 HIRIP3Q9BW71 556 aaPredicted RBP17.83■□□□□ 0.44
TRPV1-208ENST00000574085 SETD5Q9C0A6 1442 aa17.81■□□□□ 0.44
TRPV1-208ENST00000574085 UBE2Q2Q8WVN8 375 aa17.8■□□□□ 0.44
TRPV1-208ENST00000574085 CDK11AQ9UQ88 783 aaPredicted RBP17.8■□□□□ 0.44
TRPV1-208ENST00000574085 BIVM-ERCC5R4GMW8 1640 aa17.77■□□□□ 0.44
TRPV1-208ENST00000574085 ARHGAP35Q9NRY4 1499 aa17.76■□□□□ 0.43
TRPV1-208ENST00000574085 IRX6P78412 446 aaPredicted RBP17.75■□□□□ 0.43
TRPV1-208ENST00000574085 TIMELESSQ9UNS1 1208 aa17.71■□□□□ 0.43
TRPV1-208ENST00000574085 NCAPD3P42695 1498 aa17.71■□□□□ 0.43
TRPV1-208ENST00000574085 MYT1LQ9UL68 1186 aa17.69■□□□□ 0.42
TRPV1-208ENST00000574085 SALL2Q9Y467 1007 aaPredicted RBP17.69■□□□□ 0.42
TRPV1-208ENST00000574085 TIAM1Q13009 1591 aa17.69■□□□□ 0.42
TRPV1-208ENST00000574085 HNRNPUQ00839 825 aaKnown RBP eCLIP17.68■□□□□ 0.42
TRPV1-208ENST00000574085 HMGXB3Q12766 1538 aa17.68■□□□□ 0.42
TRPV1-208ENST00000574085 SLC24A1O60721 1099 aa17.67■□□□□ 0.42
TRPV1-208ENST00000574085 DEKP35659 375 aaKnown RBP17.67■□□□□ 0.42
TRPV1-208ENST00000574085 FAM50AQ14320 339 aaKnown RBP17.67■□□□□ 0.42
TRPV1-208ENST00000574085 KIF27Q86VH2 1401 aa17.65■□□□□ 0.42
TRPV1-208ENST00000574085 PHLDB1Q86UU1 1377 aa17.65■□□□□ 0.42
TRPV1-208ENST00000574085 MAP3K1Q13233 1512 aa17.62■□□□□ 0.41
TRPV1-208ENST00000574085 LRRC9Q6ZRR7 1453 aa17.62■□□□□ 0.41
TRPV1-208ENST00000574085 CUX1P39880 1505 aa17.61■□□□□ 0.41
TRPV1-208ENST00000574085 EIF5BO60841 1220 aaKnown RBP17.61■□□□□ 0.41
TRPV1-208ENST00000574085 ERICH6BQ5W0A0 696 aa17.6■□□□□ 0.41
TRPV1-208ENST00000574085 CCDC136Q96JN2 1154 aa17.59■□□□□ 0.41
TRPV1-208ENST00000574085 PPP4R2Q9NY27 417 aa17.59■□□□□ 0.41
TRPV1-208ENST00000574085 TONSLQ96HA7 1378 aa17.58■□□□□ 0.41
TRPV1-208ENST00000574085 CFTRP13569 1480 aa17.56■□□□□ 0.4
TRPV1-208ENST00000574085 B4GALNT3Q6L9W6 998 aa17.51■□□□□ 0.39
TRPV1-208ENST00000574085 NOP58Q9Y2X3 529 aaKnown RBP17.51■□□□□ 0.39
TRPV1-208ENST00000574085 NBR1Q14596 966 aa17.51■□□□□ 0.39
TRPV1-208ENST00000574085 CFAP43Q8NDM7 1665 aa17.49■□□□□ 0.39
TRPV1-208ENST00000574085 FHAD1B1AJZ9 1412 aa17.46■□□□□ 0.39
TRPV1-208ENST00000574085 PAK3O75914 559 aaPredicted RBP17.45■□□□□ 0.38
TRPV1-208ENST00000574085 PCF11O94913 1555 aaKnown RBP17.44■□□□□ 0.38
TRPV1-208ENST00000574085 ATP1B4Q9UN42 357 aaPredicted RBP17.44■□□□□ 0.38
TRPV1-208ENST00000574085 CCDC18Q5T9S5 1454 aa17.43■□□□□ 0.38
TRPV1-208ENST00000574085 CCDC184Q52MB2 194 aa17.42■□□□□ 0.38
TRPV1-208ENST00000574085 WASHC2AQ641Q2 1341 aa17.42■□□□□ 0.38
TRPV1-208ENST00000574085 IGF1RP08069 1367 aa17.4■□□□□ 0.38
TRPV1-208ENST00000574085 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRPV1-208ENST00000574085 UACAQ9BZF9 1416 aa17.39■□□□□ 0.37
TRPV1-208ENST00000574085 CADPSQ9ULU8 1353 aa17.39■□□□□ 0.37
TRPV1-208ENST00000574085 P3H3Q8IVL6 736 aa17.39■□□□□ 0.37
TRPV1-208ENST00000574085 KDM5BQ9UGL1 1544 aa17.38■□□□□ 0.37
TRPV1-208ENST00000574085 HSPA5P11021 654 aaKnown RBP17.38■□□□□ 0.37
TRPV1-208ENST00000574085 FAM9BQ8IZU0 186 aa17.38■□□□□ 0.37
TRPV1-208ENST00000574085 CC2D2AQ9P2K1 1620 aa17.37■□□□□ 0.37
TRPV1-208ENST00000574085 PKNOX2Q96KN3 472 aa17.36■□□□□ 0.37
TRPV1-208ENST00000574085 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.36■□□□□ 0.37
TRPV1-208ENST00000574085 ZBED9Q6R2W3 1325 aa17.35■□□□□ 0.37
TRPV1-208ENST00000574085 CARMIL1Q5VZK9 1371 aa17.35■□□□□ 0.37
TRPV1-208ENST00000574085 CNTLNQ9NXG0 1405 aa17.35■□□□□ 0.37
TRPV1-208ENST00000574085 PRDM2Q13029 1718 aa17.34■□□□□ 0.37
TRPV1-208ENST00000574085 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
TRPV1-208ENST00000574085 DAXXQ9UER7 740 aaPredicted RBP17.34■□□□□ 0.37
TRPV1-208ENST00000574085 PTPN23Q9H3S7 1636 aa17.34■□□□□ 0.37
TRPV1-208ENST00000574085 HFM1A2PYH4 1435 aa17.33■□□□□ 0.37
TRPV1-208ENST00000574085 FGD6Q6ZV73 1430 aa17.33■□□□□ 0.37
TRPV1-208ENST00000574085 RTL5Q5HYW3 569 aaPredicted RBP17.33■□□□□ 0.36
TRPV1-208ENST00000574085 MRS2Q9HD23 443 aa17.33■□□□□ 0.36
TRPV1-208ENST00000574085 ANP32AP39687 249 aaKnown RBP17.32■□□□□ 0.36
TRPV1-208ENST00000574085 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
TRPV1-208ENST00000574085 PTPRKQ15262 1439 aa17.31■□□□□ 0.36
TRPV1-208ENST00000574085 IPO9Q96P70 1041 aaKnown RBP17.31■□□□□ 0.36
TRPV1-208ENST00000574085 PRKRIP1Q9H875 184 aaPredicted RBP17.31■□□□□ 0.36
TRPV1-208ENST00000574085 FHOD3Q2V2M9 1422 aa17.31■□□□□ 0.36
TRPV1-208ENST00000574085 FYCO1Q9BQS8 1478 aa17.3■□□□□ 0.36
TRPV1-208ENST00000574085 AQRO60306 1485 aaKnown RBP eCLIP17.29■□□□□ 0.361e-6■■■□□ 17.3
TRPV1-208ENST00000574085 EIF4G2P78344 907 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRPV1-208ENST00000574085 ZBTB47Q9UFB7 747 aaPredicted RBP17.27■□□□□ 0.36
TRPV1-208ENST00000574085 NAIPQ13075 1403 aa17.27■□□□□ 0.35
TRPV1-208ENST00000574085 CASKIN1Q8WXD9 1431 aa17.26■□□□□ 0.35
TRPV1-208ENST00000574085 AKNAQ7Z591 1439 aa17.24■□□□□ 0.35
TRPV1-208ENST00000574085 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
TRPV1-208ENST00000574085 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
TRPV1-208ENST00000574085 C11orf95C9JLR9 678 aaPredicted RBP17.23■□□□□ 0.35
TRPV1-208ENST00000574085 CCDC7Q96M83 1385 aa17.23■□□□□ 0.35
TRPV1-208ENST00000574085 NESP48681 1621 aa17.23■□□□□ 0.35
TRPV1-208ENST00000574085 IL27Q8NEV9 243 aa17.23■□□□□ 0.35
TRPV1-208ENST00000574085 FMN1Q68DA7 1419 aa17.22■□□□□ 0.35
TRPV1-208ENST00000574085 NCOA1Q15788 1441 aa17.21■□□□□ 0.35
TRPV1-208ENST00000574085 SMG6Q86US8 1419 aaKnown RBP17.21■□□□□ 0.35
TRPV1-208ENST00000574085 RAD54L2Q9Y4B4 1467 aa17.19■□□□□ 0.34
TRPV1-208ENST00000574085 MTUS2Q5JR59 1369 aa17.19■□□□□ 0.34
TRPV1-208ENST00000574085 EFCAB5A4FU69 1503 aa17.19■□□□□ 0.34
TRPV1-208ENST00000574085 RTN4Q9NQC3 1192 aaKnown RBP17.18■□□□□ 0.34
TRPV1-208ENST00000574085 NUDCQ9Y266 331 aa17.17■□□□□ 0.34
TRPV1-208ENST00000574085 RNF123Q5XPI4 1314 aa17.15■□□□□ 0.34
TRPV1-208ENST00000574085 DENND4BO75064 1496 aaPredicted RBP17.14■□□□□ 0.33
TRPV1-208ENST00000574085 RRP7BPQ9NSQ0 103 aa17.14■□□□□ 0.33
TRPV1-208ENST00000574085 PODXL2Q9NZ53 605 aa17.14■□□□□ 0.33
TRPV1-208ENST00000574085 MYOM3Q5VTT5 1437 aa17.14■□□□□ 0.33
TRPV1-208ENST00000574085 L3MBTL2Q969R5 705 aa17.13■□□□□ 0.33
TRPV1-208ENST00000574085 HECW1Q76N89 1606 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms