RNA–Protein interactions for RNA: ENST00000573842.1

HCFC1R1-205, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-205ENST00000573842 CARMIL1Q5VZK9 1371 aa36.53■■■■□ 3.44
HCFC1R1-205ENST00000573842 KIAA0586Q9BVV6 1533 aa36.53■■■■□ 3.44
HCFC1R1-205ENST00000573842 JPH4Q96JJ6 628 aa36.51■■■■□ 3.44
HCFC1R1-205ENST00000573842 TRHP20396 242 aaPredicted RBP36.47■■■■□ 3.43
HCFC1R1-205ENST00000573842 IQGAP2Q13576 1575 aa36.36■■■■□ 3.41
HCFC1R1-205ENST00000573842 RAPGEF2Q9Y4G8 1499 aa36.34■■■■□ 3.41
HCFC1R1-205ENST00000573842 CTTNBP2Q8WZ74 1663 aa36.22■■■■□ 3.39
HCFC1R1-205ENST00000573842 ADCY10Q96PN6 1610 aa36.18■■■■□ 3.38
HCFC1R1-205ENST00000573842 CARMIL2Q6F5E8 1435 aa36.17■■■■□ 3.38
HCFC1R1-205ENST00000573842 UGGT2Q9NYU1 1516 aa36.08■■■■□ 3.37
HCFC1R1-205ENST00000573842 PRXQ9BXM0 1461 aa36.07■■■■□ 3.37
HCFC1R1-205ENST00000573842 KIF13AQ9H1H9 1805 aa36.07■■■■□ 3.36
HCFC1R1-205ENST00000573842 TNIKQ9UKE5 1360 aa36.06■■■■□ 3.36
HCFC1R1-205ENST00000573842 DISP1Q96F81 1524 aa36.04■■■■□ 3.36
HCFC1R1-205ENST00000573842 PTPRGP23470 1445 aa36.04■■■■□ 3.36
HCFC1R1-205ENST00000573842 MAPKBP1O60336 1514 aa36.03■■■■□ 3.36
HCFC1R1-205ENST00000573842 KIAA0556O60303 1618 aa36.02■■■■□ 3.36
HCFC1R1-205ENST00000573842 NPM1P06748 294 aaKnown RBP eCLIP36.01■■■■□ 3.36
HCFC1R1-205ENST00000573842 EEA1Q15075 1411 aa35.93■■■■□ 3.34
HCFC1R1-205ENST00000573842 TTBK1Q5TCY1 1321 aaPredicted RBP35.93■■■■□ 3.34
HCFC1R1-205ENST00000573842 DIP2BQ9P265 1576 aa35.89■■■■□ 3.34
HCFC1R1-205ENST00000573842 GOLGA3Q08378 1498 aa35.86■■■■□ 3.33
HCFC1R1-205ENST00000573842 ABCC10Q5T3U5 1492 aa35.86■■■■□ 3.33
HCFC1R1-205ENST00000573842 ABCC2Q92887 1545 aa35.86■■■■□ 3.33
HCFC1R1-205ENST00000573842 UHRF1BP1LA0JNW5 1464 aa35.85■■■■□ 3.33
HCFC1R1-205ENST00000573842 CSRNP3Q8WYN3 585 aa35.83■■■■□ 3.33
HCFC1R1-205ENST00000573842 UACAQ9BZF9 1416 aa35.83■■■■□ 3.33
HCFC1R1-205ENST00000573842 FAM69CQ0P6D2 419 aa35.72■■■■□ 3.31
HCFC1R1-205ENST00000573842 ZCCHC11Q5TAX3 1644 aaKnown RBP35.7■■■■□ 3.31
HCFC1R1-205ENST00000573842 KIF21BO75037 1637 aa35.68■■■■□ 3.3
HCFC1R1-205ENST00000573842 KDM5BQ9UGL1 1544 aa35.67■■■■□ 3.3
HCFC1R1-205ENST00000573842 TSPOAP1O95153 1857 aa35.66■■■■□ 3.3
HCFC1R1-205ENST00000573842 PLB1Q6P1J6 1458 aa35.66■■■■□ 3.3
HCFC1R1-205ENST00000573842 ASXL2Q76L83 1435 aa35.65■■■■□ 3.3
HCFC1R1-205ENST00000573842 SAMD9Q5K651 1589 aa35.62■■■■□ 3.29
HCFC1R1-205ENST00000573842 ABCA8O94911 1581 aa35.61■■■■□ 3.29
HCFC1R1-205ENST00000573842 CHIC1Q5VXU3 224 aa35.6■■■■□ 3.29
HCFC1R1-205ENST00000573842 FAM9AQ8IZU1 332 aaPredicted RBP35.6■■■■□ 3.29
HCFC1R1-205ENST00000573842 GLI2P10070 1586 aa35.55■■■■□ 3.28
HCFC1R1-205ENST00000573842 KDM6BO15054 1643 aa35.46■■■■□ 3.27
HCFC1R1-205ENST00000573842 EPRSP07814 1512 aaKnown RBP35.45■■■■□ 3.27
HCFC1R1-205ENST00000573842 WDR7Q9Y4E6 1490 aa35.44■■■■□ 3.26
HCFC1R1-205ENST00000573842 PPRC1Q5VV67 1664 aaKnown RBP35.43■■■■□ 3.26
HCFC1R1-205ENST00000573842 MAP3K4Q9Y6R4 1608 aa35.43■■■■□ 3.26
HCFC1R1-205ENST00000573842 P3H3Q8IVL6 736 aa35.41■■■■□ 3.26
HCFC1R1-205ENST00000573842 EFCAB5A4FU69 1503 aa35.39■■■■□ 3.26
HCFC1R1-205ENST00000573842 RAPGEF6Q8TEU7 1601 aa35.39■■■■□ 3.26
HCFC1R1-205ENST00000573842 RANGAP1P46060 587 aaPredicted RBP35.31■■■■□ 3.24
HCFC1R1-205ENST00000573842 FHOD3Q2V2M9 1422 aa35.3■■■■□ 3.24
HCFC1R1-205ENST00000573842 CFAP43Q8NDM7 1665 aa35.3■■■■□ 3.24
HCFC1R1-205ENST00000573842 TEX14Q8IWB6 1497 aa35.27■■■■□ 3.24
HCFC1R1-205ENST00000573842 ATP10BO94823 1461 aa35.22■■■■□ 3.23
HCFC1R1-205ENST00000573842 UBTFP17480 764 aaKnown RBP35.2■■■■□ 3.23
HCFC1R1-205ENST00000573842 EHMT2Q96KQ7 1210 aa35.18■■■■□ 3.22
HCFC1R1-205ENST00000573842 ARID3CA6NKF2 412 aa35.17■■■■□ 3.22
HCFC1R1-205ENST00000573842 NUP153P49790 1475 aaKnown RBP35.16■■■■□ 3.22
HCFC1R1-205ENST00000573842 KCNH8Q96L42 1107 aa35.11■■■■□ 3.21
HCFC1R1-205ENST00000573842 CD109Q6YHK3 1445 aa35.1■■■■□ 3.21
HCFC1R1-205ENST00000573842 MAGI3Q5TCQ9 1506 aa35.1■■■■□ 3.21
HCFC1R1-205ENST00000573842 ABCA9Q8IUA7 1624 aa35.07■■■■□ 3.21
HCFC1R1-205ENST00000573842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.03■■■■□ 3.2
HCFC1R1-205ENST00000573842 HNRNPUL2Q1KMD3 747 aaKnown RBP35.03■■■■□ 3.2
HCFC1R1-205ENST00000573842 ARHGAP35Q9NRY4 1499 aa35.03■■■■□ 3.2
HCFC1R1-205ENST00000573842 AEBP2Q6ZN18 517 aaPredicted RBP35.01■■■■□ 3.2
HCFC1R1-205ENST00000573842 HECW1Q76N89 1606 aa34.99■■■■□ 3.19
HCFC1R1-205ENST00000573842 FMN1Q68DA7 1419 aa34.98■■■■□ 3.19
HCFC1R1-205ENST00000573842 COL17A1Q9UMD9 1497 aaPredicted RBP34.97■■■■□ 3.19
HCFC1R1-205ENST00000573842 CDK13Q14004 1512 aaKnown RBP34.9■■■■□ 3.18
HCFC1R1-205ENST00000573842 PLEKHD1A6NEE1 506 aa34.84■■■■□ 3.17
HCFC1R1-205ENST00000573842 ARAP3Q8WWN8 1544 aa34.8■■■■□ 3.16
HCFC1R1-205ENST00000573842 TTC37Q6PGP7 1564 aa34.78■■■■□ 3.16
HCFC1R1-205ENST00000573842 CFAP74Q9C0B2 1584 aa34.78■■■■□ 3.16
HCFC1R1-205ENST00000573842 LRRIQ1Q96JM4 1722 aa34.78■■■■□ 3.16
HCFC1R1-205ENST00000573842 NEO1Q92859 1461 aa34.78■■■■□ 3.16
HCFC1R1-205ENST00000573842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.76■■■■□ 3.16
HCFC1R1-205ENST00000573842 PHLDB1Q86UU1 1377 aa34.76■■■■□ 3.16
HCFC1R1-205ENST00000573842 ATP1B4Q9UN42 357 aaPredicted RBP34.75■■■■□ 3.15
HCFC1R1-205ENST00000573842 PCF11O94913 1555 aaKnown RBP34.74■■■■□ 3.15
HCFC1R1-205ENST00000573842 CLIP1P30622 1438 aa34.67■■■■□ 3.14
HCFC1R1-205ENST00000573842 KIF14Q15058 1648 aa34.66■■■■□ 3.14
HCFC1R1-205ENST00000573842 MYO5CQ9NQX4 1742 aa34.66■■■■□ 3.14
HCFC1R1-205ENST00000573842 ADGRL1O94910 1474 aa34.65■■■■□ 3.14
HCFC1R1-205ENST00000573842 CASKIN1Q8WXD9 1431 aa34.64■■■■□ 3.14
HCFC1R1-205ENST00000573842 CDK11AQ9UQ88 783 aaPredicted RBP34.63■■■■□ 3.13
HCFC1R1-205ENST00000573842 FANCAO15360 1455 aa34.63■■■■□ 3.13
HCFC1R1-205ENST00000573842 CCDC18Q5T9S5 1454 aa34.63■■■■□ 3.13
HCFC1R1-205ENST00000573842 KDM4FA0A1W2PPD8 638 aa34.62■■■■□ 3.13
HCFC1R1-205ENST00000573842 FRMPD1Q5SYB0 1578 aa34.62■■■■□ 3.13
HCFC1R1-205ENST00000573842 FYCO1Q9BQS8 1478 aa34.6■■■■□ 3.13
HCFC1R1-205ENST00000573842 RICTORQ6R327 1708 aa34.58■■■■□ 3.13
HCFC1R1-205ENST00000573842 TROQ12816 1431 aaPredicted RBP34.57■■■■□ 3.13
HCFC1R1-205ENST00000573842 AKNAQ7Z591 1439 aa34.54■■■■□ 3.12
HCFC1R1-205ENST00000573842 DENND4BO75064 1496 aaPredicted RBP34.51■■■■□ 3.11
HCFC1R1-205ENST00000573842 PLCH2O75038 1416 aa34.49■■■■□ 3.11
HCFC1R1-205ENST00000573842 RAPGEF3O95398 923 aa34.49■■■■□ 3.11
HCFC1R1-205ENST00000573842 ARHGEF40Q8TER5 1519 aa34.45■■■■□ 3.11
HCFC1R1-205ENST00000573842 ZMYM4Q5VZL5 1548 aa34.43■■■■□ 3.1
HCFC1R1-205ENST00000573842 CEP162Q5TB80 1403 aa34.41■■■■□ 3.1
HCFC1R1-205ENST00000573842 ARHGAP5Q13017 1502 aa34.4■■■■□ 3.1
HCFC1R1-205ENST00000573842 PREX2Q70Z35 1606 aa34.4■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms