RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 CUL7Q14999 1698 aa15.82■□□□□ 0.12
NDE1-208ENST00000573694 PRG4Q92954 1404 aaPredicted RBP15.78■□□□□ 0.12
NDE1-208ENST00000573694 CARMIL1Q5VZK9 1371 aa15.76■□□□□ 0.11
NDE1-208ENST00000573694 FAM9AQ8IZU1 332 aaPredicted RBP15.73■□□□□ 0.11
NDE1-208ENST00000573694 NPM1P06748 294 aaKnown RBP eCLIP15.72■□□□□ 0.11
NDE1-208ENST00000573694 RUSC2Q8N2Y8 1516 aa15.72■□□□□ 0.11
NDE1-208ENST00000573694 CARMIL2Q6F5E8 1435 aa15.69■□□□□ 0.1
NDE1-208ENST00000573694 ERCC6L2Q5T890 1561 aa15.68■□□□□ 0.1
NDE1-208ENST00000573694 LOC105371045A0A1W2PR82 267 aa15.68■□□□□ 0.1
NDE1-208ENST00000573694 RAPGEF2Q9Y4G8 1499 aa15.64■□□□□ 0.09
NDE1-208ENST00000573694 TNIKQ9UKE5 1360 aa15.62■□□□□ 0.09
NDE1-208ENST00000573694 PTPRGP23470 1445 aa15.62■□□□□ 0.09
NDE1-208ENST00000573694 MAPKBP1O60336 1514 aa15.62■□□□□ 0.09
NDE1-208ENST00000573694 EEA1Q15075 1411 aa15.6■□□□□ 0.09
NDE1-208ENST00000573694 IQGAP2Q13576 1575 aa15.58■□□□□ 0.09
NDE1-208ENST00000573694 ABCC10Q5T3U5 1492 aa15.57■□□□□ 0.08
NDE1-208ENST00000573694 UHRF1BP1LA0JNW5 1464 aa15.56■□□□□ 0.08
NDE1-208ENST00000573694 UGGT2Q9NYU1 1516 aa15.55■□□□□ 0.08
NDE1-208ENST00000573694 EHMT2Q96KQ7 1210 aa15.55■□□□□ 0.08
NDE1-208ENST00000573694 KIF21BO75037 1637 aa15.53■□□□□ 0.08
NDE1-208ENST00000573694 GOLGA3Q08378 1498 aa15.52■□□□□ 0.07
NDE1-208ENST00000573694 ABCC2Q92887 1545 aa15.51■□□□□ 0.07
NDE1-208ENST00000573694 PLB1Q6P1J6 1458 aa15.51■□□□□ 0.07
NDE1-208ENST00000573694 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
NDE1-208ENST00000573694 ADCY10Q96PN6 1610 aa15.5■□□□□ 0.07
NDE1-208ENST00000573694 FAM69CQ0P6D2 419 aa15.5■□□□□ 0.07
NDE1-208ENST00000573694 UACAQ9BZF9 1416 aa15.5■□□□□ 0.07
NDE1-208ENST00000573694 KIF13AQ9H1H9 1805 aa15.5■□□□□ 0.07
NDE1-208ENST00000573694 AEBP2Q6ZN18 517 aaPredicted RBP15.49■□□□□ 0.07
NDE1-208ENST00000573694 DISP1Q96F81 1524 aa15.48■□□□□ 0.07
NDE1-208ENST00000573694 CSRNP3Q8WYN3 585 aa15.47■□□□□ 0.07
NDE1-208ENST00000573694 KDM5BQ9UGL1 1544 aa15.44■□□□□ 0.06
NDE1-208ENST00000573694 DIP2BQ9P265 1576 aa15.43■□□□□ 0.06
NDE1-208ENST00000573694 GLI2P10070 1586 aa15.42■□□□□ 0.06
NDE1-208ENST00000573694 KIAA0556O60303 1618 aa15.39■□□□□ 0.05
NDE1-208ENST00000573694 ASXL2Q76L83 1435 aa15.39■□□□□ 0.05
NDE1-208ENST00000573694 CTTNBP2Q8WZ74 1663 aa15.38■□□□□ 0.05
NDE1-208ENST00000573694 CEP162Q5TB80 1403 aa15.33■□□□□ 0.04
NDE1-208ENST00000573694 TEX14Q8IWB6 1497 aa15.33■□□□□ 0.04
NDE1-208ENST00000573694 EPRSP07814 1512 aaKnown RBP15.31■□□□□ 0.04
NDE1-208ENST00000573694 ABCA8O94911 1581 aa15.29■□□□□ 0.04
NDE1-208ENST00000573694 WDR7Q9Y4E6 1490 aa15.29■□□□□ 0.04
NDE1-208ENST00000573694 PHLDB1Q86UU1 1377 aa15.28■□□□□ 0.04
NDE1-208ENST00000573694 UBTFP17480 764 aaKnown RBP15.28■□□□□ 0.04
NDE1-208ENST00000573694 TTBK1Q5TCY1 1321 aaPredicted RBP15.27■□□□□ 0.04
NDE1-208ENST00000573694 KDM6BO15054 1643 aa15.26■□□□□ 0.03
NDE1-208ENST00000573694 ZCCHC11Q5TAX3 1644 aaKnown RBP15.25■□□□□ 0.03
NDE1-208ENST00000573694 MAGI3Q5TCQ9 1506 aa15.24■□□□□ 0.03
NDE1-208ENST00000573694 MAP3K4Q9Y6R4 1608 aa15.23■□□□□ 0.03
NDE1-208ENST00000573694 SAMD9Q5K651 1589 aa15.22■□□□□ 0.03
NDE1-208ENST00000573694 CD109Q6YHK3 1445 aa15.2■□□□□ 0.02
NDE1-208ENST00000573694 EFCAB5A4FU69 1503 aa15.19■□□□□ 0.02
NDE1-208ENST00000573694 TSPOAP1O95153 1857 aa15.19■□□□□ 0.02
NDE1-208ENST00000573694 CFAP43Q8NDM7 1665 aa15.19■□□□□ 0.02
NDE1-208ENST00000573694 CLIP1P30622 1438 aa15.18■□□□□ 0.02
NDE1-208ENST00000573694 ATP10BO94823 1461 aa15.18■□□□□ 0.02
NDE1-208ENST00000573694 PPRC1Q5VV67 1664 aaKnown RBP15.16■□□□□ 0.02
NDE1-208ENST00000573694 KDM4FA0A1W2PPD8 638 aa15.13■□□□□ 0.01
NDE1-208ENST00000573694 PLEKHD1A6NEE1 506 aa15.13■□□□□ 0.01
NDE1-208ENST00000573694 KCNH8Q96L42 1107 aa15.13■□□□□ 0.01
NDE1-208ENST00000573694 ARAP3Q8WWN8 1544 aa15.12■□□□□ 0.01
NDE1-208ENST00000573694 RAPGEF6Q8TEU7 1601 aa15.12■□□□□ 0.01
NDE1-208ENST00000573694 P3H3Q8IVL6 736 aa15.11■□□□□ 0.01
NDE1-208ENST00000573694 FMN1Q68DA7 1419 aa15.1■□□□□ 0.01
NDE1-208ENST00000573694 RANGAP1P46060 587 aaPredicted RBP15.1■□□□□ 0.01
NDE1-208ENST00000573694 NEO1Q92859 1461 aa15.09■□□□□ 0.01
NDE1-208ENST00000573694 COL17A1Q9UMD9 1497 aaPredicted RBP15.09■□□□□ 0.01
NDE1-208ENST00000573694 CDK11AQ9UQ88 783 aaPredicted RBP15.09■□□□□ 0.01
NDE1-208ENST00000573694 ABCA9Q8IUA7 1624 aa15.09■□□□□ 0.01
NDE1-208ENST00000573694 NUP153P49790 1475 aaKnown RBP15.08■□□□□ 0
NDE1-208ENST00000573694 ARHGAP35Q9NRY4 1499 aa15.07■□□□□ 0
NDE1-208ENST00000573694 VPS8Q8N3P4 1428 aa15.06■□□□□ 0
NDE1-208ENST00000573694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.05■□□□□ -0
NDE1-208ENST00000573694 HNRNPUL2Q1KMD3 747 aaKnown RBP15.05■□□□□ -0
NDE1-208ENST00000573694 FHOD3Q2V2M9 1422 aa15.04■□□□□ -0
NDE1-208ENST00000573694 PPARGC1BQ86YN6 1023 aaKnown RBP14.98□□□□□ -0.01
NDE1-208ENST00000573694 CFAP74Q9C0B2 1584 aa14.96□□□□□ -0.01
NDE1-208ENST00000573694 ADGRL1O94910 1474 aa14.95□□□□□ -0.02
NDE1-208ENST00000573694 MAGI2Q86UL8 1455 aa14.95□□□□□ -0.02
NDE1-208ENST00000573694 PCF11O94913 1555 aaKnown RBP14.94□□□□□ -0.02
NDE1-208ENST00000573694 PCGF6Q9BYE7 350 aa14.94□□□□□ -0.02
NDE1-208ENST00000573694 PLCH2O75038 1416 aa14.93□□□□□ -0.02
NDE1-208ENST00000573694 HECW1Q76N89 1606 aa14.93□□□□□ -0.02
NDE1-208ENST00000573694 ARID3CA6NKF2 412 aa14.93□□□□□ -0.02
NDE1-208ENST00000573694 AKNAQ7Z591 1439 aa14.92□□□□□ -0.02
NDE1-208ENST00000573694 EFCAB2Q5VUJ9 269 aa14.92□□□□□ -0.02
NDE1-208ENST00000573694 FANCAO15360 1455 aa14.92□□□□□ -0.02
NDE1-208ENST00000573694 DENND4BO75064 1496 aaPredicted RBP14.92□□□□□ -0.02
NDE1-208ENST00000573694 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.91□□□□□ -0.02
NDE1-208ENST00000573694 TRIM26Q12899 539 aaPredicted RBP14.9□□□□□ -0.02
NDE1-208ENST00000573694 CASKIN1Q8WXD9 1431 aa14.9□□□□□ -0.02
NDE1-208ENST00000573694 CCDC18Q5T9S5 1454 aa14.89□□□□□ -0.03
NDE1-208ENST00000573694 TROQ12816 1431 aaPredicted RBP14.89□□□□□ -0.03
NDE1-208ENST00000573694 RAPGEF3O95398 923 aa14.88□□□□□ -0.03
NDE1-208ENST00000573694 POGZQ7Z3K3 1410 aa14.86□□□□□ -0.03
NDE1-208ENST00000573694 ZMYM4Q5VZL5 1548 aa14.86□□□□□ -0.03
NDE1-208ENST00000573694 LRRIQ1Q96JM4 1722 aa14.86□□□□□ -0.03
NDE1-208ENST00000573694 TIAM1Q13009 1591 aa14.84□□□□□ -0.03
NDE1-208ENST00000573694 CDK13Q14004 1512 aaKnown RBP14.83□□□□□ -0.04
NDE1-208ENST00000573694 HECW2Q9P2P5 1572 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms