RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 IGF1RP08069 1367 aa33.8■■■■□ 3
HCFC1R1-204ENST00000573095 JPH4Q96JJ6 628 aa33.77■■■■□ 3
HCFC1R1-204ENST00000573095 KIAA0586Q9BVV6 1533 aa33.71■■■□□ 2.99
HCFC1R1-204ENST00000573095 CARMIL1Q5VZK9 1371 aa33.59■■■□□ 2.97
HCFC1R1-204ENST00000573095 KIF13AQ9H1H9 1805 aa33.57■■■□□ 2.96
HCFC1R1-204ENST00000573095 ADCY10Q96PN6 1610 aa33.53■■■□□ 2.96
HCFC1R1-204ENST00000573095 MAPKBP1O60336 1514 aa33.48■■■□□ 2.95
HCFC1R1-204ENST00000573095 IQGAP2Q13576 1575 aa33.46■■■□□ 2.95
HCFC1R1-204ENST00000573095 ABCC10Q5T3U5 1492 aa33.37■■■□□ 2.93
HCFC1R1-204ENST00000573095 DIP2BQ9P265 1576 aa33.36■■■□□ 2.93
HCFC1R1-204ENST00000573095 NPM1P06748 294 aaKnown RBP eCLIP33.35■■■□□ 2.93
HCFC1R1-204ENST00000573095 CARMIL2Q6F5E8 1435 aa33.35■■■□□ 2.93
HCFC1R1-204ENST00000573095 RAPGEF2Q9Y4G8 1499 aa33.34■■■□□ 2.93
HCFC1R1-204ENST00000573095 PTPRGP23470 1445 aa33.31■■■□□ 2.92
HCFC1R1-204ENST00000573095 TNIKQ9UKE5 1360 aa33.29■■■□□ 2.92
HCFC1R1-204ENST00000573095 DISP1Q96F81 1524 aa33.25■■■□□ 2.91
HCFC1R1-204ENST00000573095 UGGT2Q9NYU1 1516 aa33.24■■■□□ 2.91
HCFC1R1-204ENST00000573095 FAM69CQ0P6D2 419 aa33.22■■■□□ 2.91
HCFC1R1-204ENST00000573095 ABCC2Q92887 1545 aa33.2■■■□□ 2.91
HCFC1R1-204ENST00000573095 CTTNBP2Q8WZ74 1663 aa33.19■■■□□ 2.9
HCFC1R1-204ENST00000573095 UHRF1BP1LA0JNW5 1464 aa33.17■■■□□ 2.9
HCFC1R1-204ENST00000573095 KIAA0556O60303 1618 aa33.17■■■□□ 2.9
HCFC1R1-204ENST00000573095 UACAQ9BZF9 1416 aa33.11■■■□□ 2.89
HCFC1R1-204ENST00000573095 TTBK1Q5TCY1 1321 aaPredicted RBP33.1■■■□□ 2.89
HCFC1R1-204ENST00000573095 TSPOAP1O95153 1857 aa33.06■■■□□ 2.88
HCFC1R1-204ENST00000573095 PRXQ9BXM0 1461 aa33.05■■■□□ 2.88
HCFC1R1-204ENST00000573095 ASXL2Q76L83 1435 aa33.03■■■□□ 2.88
HCFC1R1-204ENST00000573095 PLB1Q6P1J6 1458 aa33.03■■■□□ 2.88
HCFC1R1-204ENST00000573095 KDM5BQ9UGL1 1544 aa33.02■■■□□ 2.88
HCFC1R1-204ENST00000573095 KDM6BO15054 1643 aa33.01■■■□□ 2.87
HCFC1R1-204ENST00000573095 GLI2P10070 1586 aa33■■■□□ 2.87
HCFC1R1-204ENST00000573095 AEBP2Q6ZN18 517 aaPredicted RBP32.98■■■□□ 2.87
HCFC1R1-204ENST00000573095 ZCCHC11Q5TAX3 1644 aaKnown RBP32.97■■■□□ 2.87
HCFC1R1-204ENST00000573095 GOLGA3Q08378 1498 aa32.95■■■□□ 2.87
HCFC1R1-204ENST00000573095 PPRC1Q5VV67 1664 aaKnown RBP32.93■■■□□ 2.86
HCFC1R1-204ENST00000573095 EPRSP07814 1512 aaKnown RBP32.86■■■□□ 2.85
HCFC1R1-204ENST00000573095 MAP3K4Q9Y6R4 1608 aa32.85■■■□□ 2.85
HCFC1R1-204ENST00000573095 ABCA8O94911 1581 aa32.83■■■□□ 2.85
HCFC1R1-204ENST00000573095 WDR7Q9Y4E6 1490 aa32.77■■■□□ 2.84
HCFC1R1-204ENST00000573095 EEA1Q15075 1411 aa32.72■■■□□ 2.83
HCFC1R1-204ENST00000573095 TEX14Q8IWB6 1497 aa32.7■■■□□ 2.83
HCFC1R1-204ENST00000573095 CSRNP3Q8WYN3 585 aa32.7■■■□□ 2.83
HCFC1R1-204ENST00000573095 SAMD9Q5K651 1589 aa32.69■■■□□ 2.82
HCFC1R1-204ENST00000573095 CFAP43Q8NDM7 1665 aa32.63■■■□□ 2.81
HCFC1R1-204ENST00000573095 COL17A1Q9UMD9 1497 aaPredicted RBP32.59■■■□□ 2.81
HCFC1R1-204ENST00000573095 MAGI3Q5TCQ9 1506 aa32.54■■■□□ 2.8
HCFC1R1-204ENST00000573095 KIF21BO75037 1637 aa32.51■■■□□ 2.8
HCFC1R1-204ENST00000573095 RAPGEF6Q8TEU7 1601 aa32.51■■■□□ 2.8
HCFC1R1-204ENST00000573095 P3H3Q8IVL6 736 aa32.5■■■□□ 2.79
HCFC1R1-204ENST00000573095 FAM9AQ8IZU1 332 aaPredicted RBP32.5■■■□□ 2.79
HCFC1R1-204ENST00000573095 CD109Q6YHK3 1445 aa32.5■■■□□ 2.79
HCFC1R1-204ENST00000573095 KDM4FA0A1W2PPD8 638 aa32.49■■■□□ 2.79
HCFC1R1-204ENST00000573095 ATP10BO94823 1461 aa32.48■■■□□ 2.79
HCFC1R1-204ENST00000573095 KCNH8Q96L42 1107 aa32.43■■■□□ 2.78
HCFC1R1-204ENST00000573095 ABCA9Q8IUA7 1624 aa32.39■■■□□ 2.78
HCFC1R1-204ENST00000573095 EFCAB5A4FU69 1503 aa32.38■■■□□ 2.77
HCFC1R1-204ENST00000573095 ADGRL1O94910 1474 aa32.36■■■□□ 2.77
HCFC1R1-204ENST00000573095 NUP153P49790 1475 aaKnown RBP32.36■■■□□ 2.77
HCFC1R1-204ENST00000573095 FHOD3Q2V2M9 1422 aa32.36■■■□□ 2.77
HCFC1R1-204ENST00000573095 ARID3CA6NKF2 412 aa32.36■■■□□ 2.77
HCFC1R1-204ENST00000573095 ARAP3Q8WWN8 1544 aa32.28■■■□□ 2.76
HCFC1R1-204ENST00000573095 RANGAP1P46060 587 aaPredicted RBP32.25■■■□□ 2.75
HCFC1R1-204ENST00000573095 PHLDB1Q86UU1 1377 aa32.19■■■□□ 2.74
HCFC1R1-204ENST00000573095 CHIC1Q5VXU3 224 aa32.19■■■□□ 2.74
HCFC1R1-204ENST00000573095 NEO1Q92859 1461 aa32.17■■■□□ 2.74
HCFC1R1-204ENST00000573095 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.17■■■□□ 2.74
HCFC1R1-204ENST00000573095 HNRNPUL2Q1KMD3 747 aaKnown RBP32.17■■■□□ 2.74
HCFC1R1-204ENST00000573095 FRMPD1Q5SYB0 1578 aa32.07■■■□□ 2.72
HCFC1R1-204ENST00000573095 PLEKHD1A6NEE1 506 aa32.05■■■□□ 2.72
HCFC1R1-204ENST00000573095 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.05■■■□□ 2.72
HCFC1R1-204ENST00000573095 ARHGAP35Q9NRY4 1499 aa32.04■■■□□ 2.72
HCFC1R1-204ENST00000573095 CFAP74Q9C0B2 1584 aa32.04■■■□□ 2.72
HCFC1R1-204ENST00000573095 UBTFP17480 764 aaKnown RBP32.04■■■□□ 2.72
HCFC1R1-204ENST00000573095 CDK13Q14004 1512 aaKnown RBP32.04■■■□□ 2.72
HCFC1R1-204ENST00000573095 TTC37Q6PGP7 1564 aa32.03■■■□□ 2.72
HCFC1R1-204ENST00000573095 HECW1Q76N89 1606 aa32.03■■■□□ 2.72
HCFC1R1-204ENST00000573095 FMN1Q68DA7 1419 aa32.02■■■□□ 2.72
HCFC1R1-204ENST00000573095 EHMT2Q96KQ7 1210 aa31.97■■■□□ 2.71
HCFC1R1-204ENST00000573095 RICTORQ6R327 1708 aa31.96■■■□□ 2.71
HCFC1R1-204ENST00000573095 RAPGEF3O95398 923 aa31.95■■■□□ 2.71
HCFC1R1-204ENST00000573095 FANCAO15360 1455 aa31.95■■■□□ 2.7
HCFC1R1-204ENST00000573095 ARHGEF40Q8TER5 1519 aa31.91■■■□□ 2.7
HCFC1R1-204ENST00000573095 HECW2Q9P2P5 1572 aa31.91■■■□□ 2.7
HCFC1R1-204ENST00000573095 AKNAQ7Z591 1439 aa31.91■■■□□ 2.7
HCFC1R1-204ENST00000573095 DENND4BO75064 1496 aaPredicted RBP31.91■■■□□ 2.7
HCFC1R1-204ENST00000573095 ADAMTSL3P82987 1691 aa31.89■■■□□ 2.7
HCFC1R1-204ENST00000573095 ZMYM4Q5VZL5 1548 aa31.86■■■□□ 2.69
HCFC1R1-204ENST00000573095 BCORL1Q5H9F3 1711 aa31.84■■■□□ 2.69
HCFC1R1-204ENST00000573095 LRRIQ1Q96JM4 1722 aa31.84■■■□□ 2.69
HCFC1R1-204ENST00000573095 MYO5CQ9NQX4 1742 aa31.83■■■□□ 2.69
HCFC1R1-204ENST00000573095 KIF14Q15058 1648 aa31.81■■■□□ 2.68
HCFC1R1-204ENST00000573095 PLCH2O75038 1416 aa31.81■■■□□ 2.68
HCFC1R1-204ENST00000573095 ATP1B4Q9UN42 357 aaPredicted RBP31.76■■■□□ 2.67
HCFC1R1-204ENST00000573095 TROQ12816 1431 aaPredicted RBP31.75■■■□□ 2.67
HCFC1R1-204ENST00000573095 CDK11AQ9UQ88 783 aaPredicted RBP31.75■■■□□ 2.67
HCFC1R1-204ENST00000573095 PCF11O94913 1555 aaKnown RBP31.75■■■□□ 2.67
HCFC1R1-204ENST00000573095 PTPRMP28827 1452 aa31.74■■■□□ 2.67
HCFC1R1-204ENST00000573095 MADDQ8WXG6 1647 aa31.74■■■□□ 2.67
HCFC1R1-204ENST00000573095 ZFYVE16Q7Z3T8 1539 aa31.74■■■□□ 2.67
HCFC1R1-204ENST00000573095 POGZQ7Z3K3 1410 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms