RNA–Protein interactions for RNA: ENST00000572536.1

PCTP-205, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 3

Gene PCTP, Length 647 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-205ENST00000572536 C19orf67A6NJJ6 358 aa14.64□□□□□ -0.07
PCTP-205ENST00000572536 PRR29P0C7W0 189 aa14.56□□□□□ -0.08
PCTP-205ENST00000572536 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.08
PCTP-205ENST00000572536 CHADLQ6NUI6 762 aa14.5□□□□□ -0.09
PCTP-205ENST00000572536 GABBR2O75899 941 aa14.43□□□□□ -0.1
PCTP-205ENST00000572536 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
PCTP-205ENST00000572536 CFTRP13569 1480 aa14.36□□□□□ -0.11
PCTP-205ENST00000572536 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.12
PCTP-205ENST00000572536 PRDM2Q13029 1718 aa14.32□□□□□ -0.12
PCTP-205ENST00000572536 LAMC3Q9Y6N6 1575 aa14.31□□□□□ -0.12
PCTP-205ENST00000572536 CD44P16070 742 aaKnown RBP14.28□□□□□ -0.12
PCTP-205ENST00000572536 CLCN6P51797 869 aa14.28□□□□□ -0.12
PCTP-205ENST00000572536 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
PCTP-205ENST00000572536 NESP48681 1621 aa14.26□□□□□ -0.13
PCTP-205ENST00000572536 EHMT2Q96KQ7 1210 aa14.25□□□□□ -0.13
PCTP-205ENST00000572536 SPDYE4A6NLX3 237 aa14.18□□□□□ -0.14
PCTP-205ENST00000572536 CREBZFQ9NS37 354 aa14.17□□□□□ -0.14
PCTP-205ENST00000572536 LHX8Q68G74 356 aa14.16□□□□□ -0.14
PCTP-205ENST00000572536 FANCD2Q9BXW9 1451 aa14.16□□□□□ -0.14
PCTP-205ENST00000572536 PDS5BQ9NTI5 1447 aa14.15□□□□□ -0.14
PCTP-205ENST00000572536 KIF21AQ7Z4S6 1674 aa14.14□□□□□ -0.15
PCTP-205ENST00000572536 POTEIP0CG38 1075 aa14.11□□□□□ -0.15
PCTP-205ENST00000572536 ZNF579Q8NAF0 562 aaKnown RBP14.11□□□□□ -0.15
PCTP-205ENST00000572536 CEP164Q9UPV0 1460 aa14.1□□□□□ -0.15
PCTP-205ENST00000572536 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
PCTP-205ENST00000572536 WRNQ14191 1432 aaPredicted RBP eCLIP14.06□□□□□ -0.16
PCTP-205ENST00000572536 CUX1P39880 1505 aa14.05□□□□□ -0.16
PCTP-205ENST00000572536 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
PCTP-205ENST00000572536 BIVM-ERCC5R4GMW8 1640 aa14.04□□□□□ -0.16
PCTP-205ENST00000572536 ZRANB1Q9UGI0 708 aa14.04□□□□□ -0.16
PCTP-205ENST00000572536 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
PCTP-205ENST00000572536 URB2Q14146 1524 aaKnown RBP14.03□□□□□ -0.16
PCTP-205ENST00000572536 DNMBPQ6XZF7 1577 aa14.03□□□□□ -0.16
PCTP-205ENST00000572536 THOC2Q8NI27 1593 aaKnown RBP14.03□□□□□ -0.16
PCTP-205ENST00000572536 MRC2Q9UBG0 1479 aa14.02□□□□□ -0.16
PCTP-205ENST00000572536 ERCC6Q03468 1493 aa14.01□□□□□ -0.17
PCTP-205ENST00000572536 WDR62O43379 1518 aa14□□□□□ -0.17
PCTP-205ENST00000572536 TOPBP1Q92547 1522 aa14□□□□□ -0.17
PCTP-205ENST00000572536 DCBLD2Q96PD2 775 aa13.99□□□□□ -0.17
PCTP-205ENST00000572536 MNX1P50219 401 aaPredicted RBP13.94□□□□□ -0.18
PCTP-205ENST00000572536 NPM1P06748 294 aaKnown RBP eCLIP13.93□□□□□ -0.18
PCTP-205ENST00000572536 PAK3O75914 559 aaPredicted RBP13.92□□□□□ -0.18
PCTP-205ENST00000572536 FGD5Q6ZNL6 1462 aa13.92□□□□□ -0.18
PCTP-205ENST00000572536 POLA1P09884 1462 aaPredicted RBP13.91□□□□□ -0.18
PCTP-205ENST00000572536 PROM2Q8N271 834 aa13.9□□□□□ -0.18
PCTP-205ENST00000572536 TRIM41Q8WV44 630 aa13.9□□□□□ -0.18
PCTP-205ENST00000572536 GALR2O43603 387 aaPredicted RBP13.88□□□□□ -0.19
PCTP-205ENST00000572536 CUX2O14529 1486 aa13.87□□□□□ -0.19
PCTP-205ENST00000572536 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
PCTP-205ENST00000572536 TARBP1Q13395 1621 aaKnown RBP13.85□□□□□ -0.19
PCTP-205ENST00000572536 ABCA10Q8WWZ4 1543 aa13.83□□□□□ -0.2
PCTP-205ENST00000572536 RAD54L2Q9Y4B4 1467 aa13.81□□□□□ -0.2
PCTP-205ENST00000572536 PHF12Q96QT6 1004 aa13.81□□□□□ -0.2
PCTP-205ENST00000572536 SOGA1O94964 1423 aa13.81□□□□□ -0.2
PCTP-205ENST00000572536 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
PCTP-205ENST00000572536 ABCA5Q8WWZ7 1642 aa13.76□□□□□ -0.21
PCTP-205ENST00000572536 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
PCTP-205ENST00000572536 EEA1Q15075 1411 aa13.73□□□□□ -0.21
PCTP-205ENST00000572536 KIF27Q86VH2 1401 aa13.73□□□□□ -0.21
PCTP-205ENST00000572536 ZNF608Q9ULD9 1512 aaPredicted RBP13.71□□□□□ -0.21
PCTP-205ENST00000572536 EIF4G3O43432 1585 aaKnown RBP13.7□□□□□ -0.22
PCTP-205ENST00000572536 GAPVD1Q14C86 1478 aa13.67□□□□□ -0.22
PCTP-205ENST00000572536 TDRD9Q8NDG6 1382 aaKnown RBP13.67□□□□□ -0.22
PCTP-205ENST00000572536 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
PCTP-205ENST00000572536 ERICH3Q5RHP9 1530 aa13.66□□□□□ -0.22
PCTP-205ENST00000572536 ASTLQ6HA08 431 aaPredicted RBP13.65□□□□□ -0.22
PCTP-205ENST00000572536 AQRO60306 1485 aaKnown RBP eCLIP13.65□□□□□ -0.222e-6■□□□□ 9
PCTP-205ENST00000572536 IGF1RP08069 1367 aa13.64□□□□□ -0.23
PCTP-205ENST00000572536 PELP1Q8IZL8 1130 aaKnown RBP13.64□□□□□ -0.23
PCTP-205ENST00000572536 MS4A3Q96HJ5 214 aa13.64□□□□□ -0.23
PCTP-205ENST00000572536 GRIN2BQ13224 1484 aa13.63□□□□□ -0.23
PCTP-205ENST00000572536 POTEB2H3BUK9 544 aa13.63□□□□□ -0.23
PCTP-205ENST00000572536 OTUD5Q96G74 571 aa13.63□□□□□ -0.23
PCTP-205ENST00000572536 PRXQ9BXM0 1461 aa13.61□□□□□ -0.23
PCTP-205ENST00000572536 CUL7Q14999 1698 aa13.61□□□□□ -0.23
PCTP-205ENST00000572536 CCDC61Q9Y6R9 512 aa13.61□□□□□ -0.23
PCTP-205ENST00000572536 KIF21BO75037 1637 aa13.6□□□□□ -0.23
PCTP-205ENST00000572536 ATMINO43313 823 aaPredicted RBP13.59□□□□□ -0.23
PCTP-205ENST00000572536 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
PCTP-205ENST00000572536 ADAMTS12P58397 1594 aa13.58□□□□□ -0.23
PCTP-205ENST00000572536 MAGI1Q96QZ7 1491 aaPredicted RBP13.57□□□□□ -0.24
PCTP-205ENST00000572536 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
PCTP-205ENST00000572536 C7P10643 843 aa13.57□□□□□ -0.24
PCTP-205ENST00000572536 FAM9AQ8IZU1 332 aaPredicted RBP13.57□□□□□ -0.24
PCTP-205ENST00000572536 SLC39A7Q92504 469 aa13.56□□□□□ -0.24
PCTP-205ENST00000572536 SNAPC4Q5SXM2 1469 aa13.55□□□□□ -0.24
PCTP-205ENST00000572536 MIER1Q8N108 512 aa13.54□□□□□ -0.24
PCTP-205ENST00000572536 KIF12Q96FN5 646 aa13.54□□□□□ -0.24
PCTP-205ENST00000572536 CARMIL1Q5VZK9 1371 aa13.54□□□□□ -0.24
PCTP-205ENST00000572536 FHAD1B1AJZ9 1412 aa13.54□□□□□ -0.24
PCTP-205ENST00000572536 METRNQ9UJH8 293 aa13.53□□□□□ -0.24
PCTP-205ENST00000572536 RAPGEF2Q9Y4G8 1499 aa13.52□□□□□ -0.25
PCTP-205ENST00000572536 SYNJ2O15056 1496 aa13.5□□□□□ -0.25
PCTP-205ENST00000572536 GOLGA3Q08378 1498 aa13.5□□□□□ -0.25
PCTP-205ENST00000572536 RASEFQ8IZ41 740 aa13.46□□□□□ -0.25
PCTP-205ENST00000572536 GRIN2AQ12879 1464 aa13.46□□□□□ -0.25
PCTP-205ENST00000572536 CHD1O14646 1710 aa13.45□□□□□ -0.26
PCTP-205ENST00000572536 ATN1P54259 1190 aaPredicted RBP13.44□□□□□ -0.26
PCTP-205ENST00000572536 MAMSTRQ6ZN01 415 aa13.43□□□□□ -0.26
PCTP-205ENST00000572536 NUP160Q12769 1436 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms