RNA–Protein interactions for RNA: ENST00000571725.1

RPA1-204, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-204ENST00000571725 NPM1P06748 294 aaKnown RBP eCLIP9.69□□□□□ -0.86
RPA1-204ENST00000571725 ASTLQ6HA08 431 aaPredicted RBP9.66□□□□□ -0.86
RPA1-204ENST00000571725 POTEJP0CG39 1038 aa9.64□□□□□ -0.87
RPA1-204ENST00000571725 ATMINO43313 823 aaPredicted RBP9.63□□□□□ -0.87
RPA1-204ENST00000571725 LCE2DQ5TA82 110 aaPredicted RBP9.63□□□□□ -0.87
RPA1-204ENST00000571725 MS4A3Q96HJ5 214 aa9.62□□□□□ -0.87
RPA1-204ENST00000571725 CDAN1Q8IWY9 1227 aa9.6□□□□□ -0.87
RPA1-204ENST00000571725 ATN1P54259 1190 aaPredicted RBP9.51□□□□□ -0.89
RPA1-204ENST00000571725 SEC24BO95487 1268 aa9.47□□□□□ -0.89
RPA1-204ENST00000571725 TSPYL2Q9H2G4 693 aaPredicted RBP9.47□□□□□ -0.89
RPA1-204ENST00000571725 MNX1P50219 401 aaPredicted RBP9.43□□□□□ -0.9
RPA1-204ENST00000571725 MMRN1Q13201 1228 aa9.4□□□□□ -0.9
RPA1-204ENST00000571725 POTEFA5A3E0 1075 aa9.39□□□□□ -0.91
RPA1-204ENST00000571725 BMP2KQ9NSY1 1161 aaPredicted RBP9.39□□□□□ -0.91
RPA1-204ENST00000571725 SPDYE4A6NLX3 237 aa9.38□□□□□ -0.91
RPA1-204ENST00000571725 SLAIN1Q8ND83 568 aa9.37□□□□□ -0.91
RPA1-204ENST00000571725 ST18O60284 1047 aa9.36□□□□□ -0.91
RPA1-204ENST00000571725 TIE1P35590 1138 aa9.35□□□□□ -0.91
RPA1-204ENST00000571725 SPNS2Q8IVW8 549 aa9.35□□□□□ -0.91
RPA1-204ENST00000571725 KIF12Q96FN5 646 aa9.35□□□□□ -0.91
RPA1-204ENST00000571725 CCDC61Q9Y6R9 512 aa9.34□□□□□ -0.91
RPA1-204ENST00000571725 COLQQ9Y215 455 aaPredicted RBP9.33□□□□□ -0.92
RPA1-204ENST00000571725 TRPC6Q9Y210 931 aa9.31□□□□□ -0.92
RPA1-204ENST00000571725 MAP3K13O43283 966 aa9.28□□□□□ -0.92
RPA1-204ENST00000571725 TTLL13PA6NNM8 815 aa9.27□□□□□ -0.93
RPA1-204ENST00000571725 IER5LQ5T953 404 aa9.26□□□□□ -0.93
RPA1-204ENST00000571725 TMEM121BQ9BXQ6 578 aaPredicted RBP9.25□□□□□ -0.93
RPA1-204ENST00000571725 TRIM35Q9UPQ4 493 aa9.25□□□□□ -0.93
RPA1-204ENST00000571725 PLEKHG5O94827 1062 aa9.23□□□□□ -0.93
RPA1-204ENST00000571725 SNPHO15079 494 aa9.22□□□□□ -0.93
RPA1-204ENST00000571725 PLCG2P16885 1265 aa9.21□□□□□ -0.94
RPA1-204ENST00000571725 MARVELD3Q96A59 401 aa9.19□□□□□ -0.94
RPA1-204ENST00000571725 PCDHB13Q9Y5F0 798 aa9.16□□□□□ -0.94
RPA1-204ENST00000571725 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.13□□□□□ -0.95
RPA1-204ENST00000571725 RASEFQ8IZ41 740 aa9.12□□□□□ -0.95
RPA1-204ENST00000571725 SGIP1Q9BQI5 828 aa9.11□□□□□ -0.95
RPA1-204ENST00000571725 EMP3P54852 163 aa9.1□□□□□ -0.95
RPA1-204ENST00000571725 MIER1Q8N108 512 aa9.1□□□□□ -0.95
RPA1-204ENST00000571725 TMEM106CQ9BVX2 250 aa9.1□□□□□ -0.95
RPA1-204ENST00000571725 OCEL1Q9H607 264 aa9.03□□□□□ -0.96
RPA1-204ENST00000571725 IRX5P78411 483 aaPredicted RBP9.02□□□□□ -0.97
RPA1-204ENST00000571725 IFNL1Q8IU54 200 aa9.02□□□□□ -0.97
RPA1-204ENST00000571725 FAM205CA6NFA0 338 aa9.01□□□□□ -0.97
RPA1-204ENST00000571725 HS3ST6Q96QI5 342 aa9□□□□□ -0.97
RPA1-204ENST00000571725 C3orf67Q6ZVT6 689 aa8.99□□□□□ -0.97
RPA1-204ENST00000571725 KRTAP3-3Q9BYR6 98 aa8.98□□□□□ -0.97
RPA1-204ENST00000571725 KRTAP3-2Q9BYR7 98 aa8.98□□□□□ -0.97
RPA1-204ENST00000571725 PLCD3Q8N3E9 789 aa8.97□□□□□ -0.97
RPA1-204ENST00000571725 ZBTB47Q9UFB7 747 aaPredicted RBP8.95□□□□□ -0.98
RPA1-204ENST00000571725 CSRNP3Q8WYN3 585 aa8.94□□□□□ -0.98
RPA1-204ENST00000571725 FAM212AQ96EL1 285 aa8.93□□□□□ -0.98
RPA1-204ENST00000571725 RNF166Q96A37 237 aaPredicted RBP8.91□□□□□ -0.98
RPA1-204ENST00000571725 PROM2Q8N271 834 aa8.9□□□□□ -0.98
RPA1-204ENST00000571725 POTEB3A0JP26 581 aa8.89□□□□□ -0.99
RPA1-204ENST00000571725 POTEBQ6S5H4 581 aa8.89□□□□□ -0.99
RPA1-204ENST00000571725 L3MBTL3Q96JM7 780 aaPredicted RBP8.88□□□□□ -0.99
RPA1-204ENST00000571725 GOLGA2Q08379 1002 aa8.87□□□□□ -0.99
RPA1-204ENST00000571725 NUBP1P53384 320 aa8.84□□□□□ -0.99
RPA1-204ENST00000571725 MKRN3Q13064 507 aaKnown RBP8.82□□□□□ -1
RPA1-204ENST00000571725 MYT1LQ9UL68 1186 aa8.82□□□□□ -1
RPA1-204ENST00000571725 ZNF710Q8N1W2 664 aa8.81□□□□□ -1
RPA1-204ENST00000571725 ERBB3P21860 1342 aa8.8□□□□□ -1
RPA1-204ENST00000571725 PYGBP11216 843 aa8.79□□□□□ -1
RPA1-204ENST00000571725 G3V3G9 751 aa8.78□□□□□ -1
RPA1-204ENST00000571725 DCAF8Q5TAQ9 597 aa8.78□□□□□ -1
RPA1-204ENST00000571725 PCDHB8Q9UN66 801 aa8.78□□□□□ -1
RPA1-204ENST00000571725 PDCD7Q8N8D1 485 aaKnown RBP8.77□□□□□ -1.01
RPA1-204ENST00000571725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.76□□□□□ -1.01
RPA1-204ENST00000571725 HOXB1P14653 301 aaPredicted RBP8.71□□□□□ -1.02
RPA1-204ENST00000571725 DOK7Q18PE1 504 aa8.7□□□□□ -1.02
RPA1-204ENST00000571725 RIMBP2O15034 1052 aa8.69□□□□□ -1.02
RPA1-204ENST00000571725 VARS2Q5ST30 1063 aaKnown RBP8.69□□□□□ -1.02
RPA1-204ENST00000571725 PTGER2P43116 358 aa8.68□□□□□ -1.02
RPA1-204ENST00000571725 HOXB3P14651 431 aaPredicted RBP8.66□□□□□ -1.02
RPA1-204ENST00000571725 ZNF467Q7Z7K2 595 aaPredicted RBP8.66□□□□□ -1.02
RPA1-204ENST00000571725 EHMT2Q96KQ7 1210 aa8.64□□□□□ -1.03
RPA1-204ENST00000571725 BOLA1Q9Y3E2 137 aa8.62□□□□□ -1.03
RPA1-204ENST00000571725 ANKRD13DQ6ZTN6 518 aa8.61□□□□□ -1.03
RPA1-204ENST00000571725 ZNF687Q8N1G0 1237 aa8.6□□□□□ -1.03
RPA1-204ENST00000571725 DPY19L2Q6NUT2 758 aa8.59□□□□□ -1.03
RPA1-204ENST00000571725 PSEN1P49768 467 aa8.58□□□□□ -1.04
RPA1-204ENST00000571725 PLA2G2EQ9NZK7 142 aa8.58□□□□□ -1.04
RPA1-204ENST00000571725 GSE1Q14687 1217 aa8.54□□□□□ -1.04
RPA1-204ENST00000571725 ZSWIM6Q9HCJ5 1215 aa8.52□□□□□ -1.05
RPA1-204ENST00000571725 CABP2Q9NPB3 220 aa8.51□□□□□ -1.05
RPA1-204ENST00000571725 PDAP1Q13442 181 aaKnown RBP8.49□□□□□ -1.05
RPA1-204ENST00000571725 ILDR1Q86SU0 546 aaPredicted RBP8.49□□□□□ -1.05
RPA1-204ENST00000571725 KLHL34Q8N239 644 aa8.47□□□□□ -1.05
RPA1-204ENST00000571725 LSM11P83369 360 aaKnown RBP eCLIP8.46□□□□□ -1.06
RPA1-204ENST00000571725 HCSTQ9UBK5 93 aa8.46□□□□□ -1.06
RPA1-204ENST00000571725 CHRM1P11229 460 aaPredicted RBP8.43□□□□□ -1.06
RPA1-204ENST00000571725 GPR153Q6NV75 609 aa8.43□□□□□ -1.06
RPA1-204ENST00000571725 ARSIQ5FYB1 569 aa8.4□□□□□ -1.06
RPA1-204ENST00000571725 ZNF316A6NFI3 1004 aaPredicted RBP8.39□□□□□ -1.07
RPA1-204ENST00000571725 PBX2P40425 430 aa8.35□□□□□ -1.07
RPA1-204ENST00000571725 FBXO3Q9UK99 471 aa8.35□□□□□ -1.07
RPA1-204ENST00000571725 MICALL2Q8IY33 904 aa8.34□□□□□ -1.07
RPA1-204ENST00000571725 IRX2Q9BZI1 471 aaPredicted RBP8.34□□□□□ -1.07
RPA1-204ENST00000571725 TMEM92Q6UXU6 159 aa8.32□□□□□ -1.08
RPA1-204ENST00000571725 KHSRPQ92945 711 aaKnown RBP eCLIP8.31□□□□□ -1.082e-6■■□□□ 11.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms