RNA–Protein interactions for RNA: ENST00000571489.5

PCTP-204, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 1 (best)

Gene PCTP, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-204ENST00000571489 RAB3GAP2Q9H2M9 1393 aa10.58□□□□□ -0.72
PCTP-204ENST00000571489 ERICH3Q5RHP9 1530 aa10.57□□□□□ -0.72
PCTP-204ENST00000571489 HNRNPUQ00839 825 aaKnown RBP eCLIP10.57□□□□□ -0.72
PCTP-204ENST00000571489 SIN3AQ96ST3 1273 aa10.57□□□□□ -0.72
PCTP-204ENST00000571489 CC2D2AQ9P2K1 1620 aa10.56□□□□□ -0.72
PCTP-204ENST00000571489 HIRIP3Q9BW71 556 aaPredicted RBP10.54□□□□□ -0.72
PCTP-204ENST00000571489 CCER2I3L3R5 266 aa10.53□□□□□ -0.72
PCTP-204ENST00000571489 CFTRP13569 1480 aa10.52□□□□□ -0.72
PCTP-204ENST00000571489 PRXQ9BXM0 1461 aa10.52□□□□□ -0.73
PCTP-204ENST00000571489 TOP2BQ02880 1626 aa10.52□□□□□ -0.73
PCTP-204ENST00000571489 CNGB1Q14028 1251 aaPredicted RBP10.52□□□□□ -0.73
PCTP-204ENST00000571489 ARHGAP35Q9NRY4 1499 aa10.52□□□□□ -0.73
PCTP-204ENST00000571489 RRBP1Q9P2E9 1410 aaKnown RBP10.51□□□□□ -0.73
PCTP-204ENST00000571489 EIF4G2P78344 907 aaKnown RBP eCLIP10.5□□□□□ -0.73
PCTP-204ENST00000571489 ANP32EQ9BTT0 268 aa10.5□□□□□ -0.73
PCTP-204ENST00000571489 CHIC2Q9UKJ5 165 aa10.49□□□□□ -0.73
PCTP-204ENST00000571489 ARAP1Q96P48 1450 aa10.49□□□□□ -0.73
PCTP-204ENST00000571489 FANCD2Q9BXW9 1451 aa10.49□□□□□ -0.73
PCTP-204ENST00000571489 PPP1R15AO75807 674 aaPredicted RBP10.47□□□□□ -0.73
PCTP-204ENST00000571489 ZNF326Q5BKZ1 582 aaKnown RBP10.47□□□□□ -0.73
PCTP-204ENST00000571489 RRP7BPQ9NSQ0 103 aa10.46□□□□□ -0.73
PCTP-204ENST00000571489 FMN1Q68DA7 1419 aa10.46□□□□□ -0.74
PCTP-204ENST00000571489 ARID3CA6NKF2 412 aa10.46□□□□□ -0.74
PCTP-204ENST00000571489 IGF1RP08069 1367 aa10.45□□□□□ -0.74
PCTP-204ENST00000571489 FAM9BQ8IZU0 186 aa10.45□□□□□ -0.74
PCTP-204ENST00000571489 TSHZ2Q9NRE2 1034 aa10.45□□□□□ -0.74
PCTP-204ENST00000571489 PDS5BQ9NTI5 1447 aa10.45□□□□□ -0.74
PCTP-204ENST00000571489 MRS2Q9HD23 443 aa10.44□□□□□ -0.74
PCTP-204ENST00000571489 CUX1P39880 1505 aa10.44□□□□□ -0.74
PCTP-204ENST00000571489 RTL5Q5HYW3 569 aaPredicted RBP10.44□□□□□ -0.74
PCTP-204ENST00000571489 NESP48681 1621 aa10.43□□□□□ -0.74
PCTP-204ENST00000571489 FGD5Q6ZNL6 1462 aa10.42□□□□□ -0.74
PCTP-204ENST00000571489 FBLN2P98095 1184 aa10.41□□□□□ -0.74
PCTP-204ENST00000571489 FHOD3Q2V2M9 1422 aa10.41□□□□□ -0.74
PCTP-204ENST00000571489 MYT1LQ9UL68 1186 aa10.41□□□□□ -0.74
PCTP-204ENST00000571489 LRRC9Q6ZRR7 1453 aa10.41□□□□□ -0.74
PCTP-204ENST00000571489 DNAJC5BQ9UF47 199 aa10.4□□□□□ -0.74
PCTP-204ENST00000571489 DAXXQ9UER7 740 aaPredicted RBP10.39□□□□□ -0.75
PCTP-204ENST00000571489 IRX6P78412 446 aaPredicted RBP10.39□□□□□ -0.75
PCTP-204ENST00000571489 TDRD9Q8NDG6 1382 aaKnown RBP10.39□□□□□ -0.75
PCTP-204ENST00000571489 KCNH8Q96L42 1107 aa10.39□□□□□ -0.75
PCTP-204ENST00000571489 SLC4A1APQ9BWU0 796 aaKnown RBP10.38□□□□□ -0.75
PCTP-204ENST00000571489 ANP32AP39687 249 aaKnown RBP10.38□□□□□ -0.75
PCTP-204ENST00000571489 ZNF777Q9ULD5 760 aaPredicted RBP10.38□□□□□ -0.75
PCTP-204ENST00000571489 PHLDB1Q86UU1 1377 aa10.38□□□□□ -0.75
PCTP-204ENST00000571489 BIVM-ERCC5R4GMW8 1640 aa10.37□□□□□ -0.75
PCTP-204ENST00000571489 RAD54L2Q9Y4B4 1467 aa10.36□□□□□ -0.75
PCTP-204ENST00000571489 PPP4R2Q9NY27 417 aa10.36□□□□□ -0.75
PCTP-204ENST00000571489 ERCC6Q03468 1493 aa10.36□□□□□ -0.75
PCTP-204ENST00000571489 ERICH6BQ5W0A0 696 aa10.36□□□□□ -0.75
PCTP-204ENST00000571489 RBM19Q9Y4C8 960 aaKnown RBP10.36□□□□□ -0.75
PCTP-204ENST00000571489 TIAM1Q13009 1591 aa10.35□□□□□ -0.75
PCTP-204ENST00000571489 HSPA5P11021 654 aaKnown RBP10.35□□□□□ -0.75
PCTP-204ENST00000571489 TMC1Q8TDI8 760 aa10.34□□□□□ -0.75
PCTP-204ENST00000571489 CCDC136Q96JN2 1154 aa10.34□□□□□ -0.75
PCTP-204ENST00000571489 MAP3K1Q13233 1512 aa10.34□□□□□ -0.75
PCTP-204ENST00000571489 CCDC18Q5T9S5 1454 aa10.34□□□□□ -0.75
PCTP-204ENST00000571489 FGD6Q6ZV73 1430 aa10.32□□□□□ -0.76
PCTP-204ENST00000571489 CASKIN1Q8WXD9 1431 aa10.32□□□□□ -0.76
PCTP-204ENST00000571489 TOPBP1Q92547 1522 aa10.31□□□□□ -0.76
PCTP-204ENST00000571489 FYCO1Q9BQS8 1478 aa10.31□□□□□ -0.76
PCTP-204ENST00000571489 UACAQ9BZF9 1416 aa10.3□□□□□ -0.76
PCTP-204ENST00000571489 POLA1P09884 1462 aaPredicted RBP10.29□□□□□ -0.76
PCTP-204ENST00000571489 MPHOSPH9Q99550 1183 aa10.29□□□□□ -0.76
PCTP-204ENST00000571489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.29□□□□□ -0.76
PCTP-204ENST00000571489 EFCAB5A4FU69 1503 aa10.29□□□□□ -0.76
PCTP-204ENST00000571489 TSPY4P0CV99 314 aa10.29□□□□□ -0.76
PCTP-204ENST00000571489 TSPY10P0CW01 314 aa10.29□□□□□ -0.76
PCTP-204ENST00000571489 DNMBPQ6XZF7 1577 aa10.28□□□□□ -0.76
PCTP-204ENST00000571489 LAMC3Q9Y6N6 1575 aa10.28□□□□□ -0.76
PCTP-204ENST00000571489 CFDP1Q9UEE9 299 aaPredicted RBP10.28□□□□□ -0.76
PCTP-204ENST00000571489 CHMP7Q8WUX9 453 aaPredicted RBP10.28□□□□□ -0.76
PCTP-204ENST00000571489 MYOM3Q5VTT5 1437 aa10.27□□□□□ -0.77
PCTP-204ENST00000571489 WDR97A6NE52 1622 aa10.26□□□□□ -0.77
PCTP-204ENST00000571489 L3MBTL2Q969R5 705 aa10.26□□□□□ -0.77
PCTP-204ENST00000571489 GAPVD1Q14C86 1478 aa10.25□□□□□ -0.77
PCTP-204ENST00000571489 ZBTB47Q9UFB7 747 aaPredicted RBP10.25□□□□□ -0.77
PCTP-204ENST00000571489 KDM2AQ9Y2K7 1162 aa10.24□□□□□ -0.77
PCTP-204ENST00000571489 B4GALNT3Q6L9W6 998 aa10.23□□□□□ -0.77
PCTP-204ENST00000571489 PLEKHD1A6NEE1 506 aa10.23□□□□□ -0.77
PCTP-204ENST00000571489 HFM1A2PYH4 1435 aa10.23□□□□□ -0.77
PCTP-204ENST00000571489 NCOA2Q15596 1464 aa10.22□□□□□ -0.77
PCTP-204ENST00000571489 NPM2Q86SE8 214 aaKnown RBP10.22□□□□□ -0.77
PCTP-204ENST00000571489 CARD11Q9BXL7 1154 aa10.22□□□□□ -0.77
PCTP-204ENST00000571489 URB2Q14146 1524 aaKnown RBP10.22□□□□□ -0.77
PCTP-204ENST00000571489 AQRO60306 1485 aaKnown RBP eCLIP10.22□□□□□ -0.772e-6■□□□□ 9
PCTP-204ENST00000571489 FOXD1Q16676 465 aa10.21□□□□□ -0.77
PCTP-204ENST00000571489 ABCA10Q8WWZ4 1543 aa10.21□□□□□ -0.78
PCTP-204ENST00000571489 PCF11O94913 1555 aaKnown RBP10.21□□□□□ -0.78
PCTP-204ENST00000571489 PRKRIP1Q9H875 184 aaPredicted RBP10.2□□□□□ -0.78
PCTP-204ENST00000571489 PRDM2Q13029 1718 aa10.2□□□□□ -0.78
PCTP-204ENST00000571489 MAPKBP1O60336 1514 aa10.2□□□□□ -0.78
PCTP-204ENST00000571489 SALL2Q9Y467 1007 aaPredicted RBP10.19□□□□□ -0.78
PCTP-204ENST00000571489 MRC2Q9UBG0 1479 aa10.19□□□□□ -0.78
PCTP-204ENST00000571489 NBR1Q14596 966 aa10.19□□□□□ -0.78
PCTP-204ENST00000571489 ZBED9Q6R2W3 1325 aa10.18□□□□□ -0.78
PCTP-204ENST00000571489 NOP58Q9Y2X3 529 aaKnown RBP10.18□□□□□ -0.78
PCTP-204ENST00000571489 FANCIQ9NVI1 1328 aa10.17□□□□□ -0.78
PCTP-204ENST00000571489 CNTLNQ9NXG0 1405 aa10.17□□□□□ -0.78
PCTP-204ENST00000571489 PKD2Q13563 968 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms