RNA–Protein interactions for RNA: ENST00000571088.5

TRPV1-206, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-206ENST00000571088 KIF21BO75037 1637 aa18.57■□□□□ 0.56
TRPV1-206ENST00000571088 ZBTB47Q9UFB7 747 aaPredicted RBP18.55■□□□□ 0.56
TRPV1-206ENST00000571088 DHX57Q6P158 1386 aaKnown RBP18.54■□□□□ 0.56
TRPV1-206ENST00000571088 MTUS2Q5JR59 1369 aa18.5■□□□□ 0.55
TRPV1-206ENST00000571088 CCDC136Q96JN2 1154 aa18.5■□□□□ 0.55
TRPV1-206ENST00000571088 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
TRPV1-206ENST00000571088 CUX2O14529 1486 aa18.49■□□□□ 0.55
TRPV1-206ENST00000571088 SYNJ1O43426 1573 aa18.49■□□□□ 0.55
TRPV1-206ENST00000571088 ZNF326Q5BKZ1 582 aaKnown RBP18.48■□□□□ 0.55
TRPV1-206ENST00000571088 CARMIL1Q5VZK9 1371 aa18.48■□□□□ 0.55
TRPV1-206ENST00000571088 SIN3AQ96ST3 1273 aa18.47■□□□□ 0.55
TRPV1-206ENST00000571088 TIMELESSQ9UNS1 1208 aa18.47■□□□□ 0.55
TRPV1-206ENST00000571088 SETD5Q9C0A6 1442 aa18.46■□□□□ 0.55
TRPV1-206ENST00000571088 EIF4G1Q04637 1599 aaKnown RBP18.45■□□□□ 0.54
TRPV1-206ENST00000571088 RAB3GAP2Q9H2M9 1393 aa18.45■□□□□ 0.54
TRPV1-206ENST00000571088 DEKP35659 375 aaKnown RBP18.42■□□□□ 0.54
TRPV1-206ENST00000571088 MRS2Q9HD23 443 aa18.41■□□□□ 0.54
TRPV1-206ENST00000571088 RTN4Q9NQC3 1192 aaKnown RBP18.38■□□□□ 0.53
TRPV1-206ENST00000571088 ERICH3Q5RHP9 1530 aa18.35■□□□□ 0.53
TRPV1-206ENST00000571088 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
TRPV1-206ENST00000571088 KCNH8Q96L42 1107 aa18.34■□□□□ 0.53
TRPV1-206ENST00000571088 ARID3CA6NKF2 412 aa18.33■□□□□ 0.53
TRPV1-206ENST00000571088 NOP58Q9Y2X3 529 aaKnown RBP18.33■□□□□ 0.52
TRPV1-206ENST00000571088 PPP4R2Q9NY27 417 aa18.32■□□□□ 0.52
TRPV1-206ENST00000571088 B4GALNT3Q6L9W6 998 aa18.32■□□□□ 0.52
TRPV1-206ENST00000571088 CCER2I3L3R5 266 aa18.31■□□□□ 0.52
TRPV1-206ENST00000571088 ARHGAP35Q9NRY4 1499 aa18.3■□□□□ 0.52
TRPV1-206ENST00000571088 SALL2Q9Y467 1007 aaPredicted RBP18.3■□□□□ 0.52
TRPV1-206ENST00000571088 EIF4G2P78344 907 aaKnown RBP eCLIP18.29■□□□□ 0.52
TRPV1-206ENST00000571088 TOP2BQ02880 1626 aa18.29■□□□□ 0.52
TRPV1-206ENST00000571088 PRXQ9BXM0 1461 aa18.28■□□□□ 0.52
TRPV1-206ENST00000571088 RRP7BPQ9NSQ0 103 aa18.27■□□□□ 0.52
TRPV1-206ENST00000571088 RRBP1Q9P2E9 1410 aaKnown RBP18.26■□□□□ 0.51
TRPV1-206ENST00000571088 ARAP1Q96P48 1450 aa18.26■□□□□ 0.51
TRPV1-206ENST00000571088 SENP3-EIF4A1A0A087X0R7 540 aa18.25■□□□□ 0.51
TRPV1-206ENST00000571088 PPP1R15AO75807 674 aaPredicted RBP18.24■□□□□ 0.51
TRPV1-206ENST00000571088 PEG3Q9GZU2 1588 aa18.24■□□□□ 0.51
TRPV1-206ENST00000571088 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
TRPV1-206ENST00000571088 BICRAQ9NZM4 1560 aa18.21■□□□□ 0.51
TRPV1-206ENST00000571088 NCAPD3P42695 1498 aa18.21■□□□□ 0.5
TRPV1-206ENST00000571088 TMC1Q8TDI8 760 aa18.21■□□□□ 0.5
TRPV1-206ENST00000571088 IGF1RP08069 1367 aa18.19■□□□□ 0.5
TRPV1-206ENST00000571088 LAS1LQ9Y4W2 734 aaKnown RBP18.19■□□□□ 0.5
TRPV1-206ENST00000571088 FMN1Q68DA7 1419 aa18.18■□□□□ 0.5
TRPV1-206ENST00000571088 UNC13AQ9UPW8 1703 aa18.18■□□□□ 0.5
TRPV1-206ENST00000571088 NEFMP07197 916 aa18.16■□□□□ 0.5
TRPV1-206ENST00000571088 ZNF777Q9ULD5 760 aaPredicted RBP18.16■□□□□ 0.5
TRPV1-206ENST00000571088 FHOD3Q2V2M9 1422 aa18.15■□□□□ 0.5
TRPV1-206ENST00000571088 GLIPR1L2Q4G1C9 344 aa18.14■□□□□ 0.5
TRPV1-206ENST00000571088 ARXQ96QS3 562 aa18.13■□□□□ 0.49
TRPV1-206ENST00000571088 SLC4A1APQ9BWU0 796 aaKnown RBP18.12■□□□□ 0.49
TRPV1-206ENST00000571088 LRRC9Q6ZRR7 1453 aa18.11■□□□□ 0.49
TRPV1-206ENST00000571088 CFTRP13569 1480 aa18.1■□□□□ 0.49
TRPV1-206ENST00000571088 CUX1P39880 1505 aa18.1■□□□□ 0.49
TRPV1-206ENST00000571088 FBLN2P98095 1184 aa18.09■□□□□ 0.49
TRPV1-206ENST00000571088 PHLDB1Q86UU1 1377 aa18.09■□□□□ 0.49
TRPV1-206ENST00000571088 FGD5Q6ZNL6 1462 aa18.07■□□□□ 0.48
TRPV1-206ENST00000571088 PPM1GO15355 546 aaPredicted RBP18.07■□□□□ 0.48
TRPV1-206ENST00000571088 CANXP27824 592 aaKnown RBP18.07■□□□□ 0.48
TRPV1-206ENST00000571088 HMGXB3Q12766 1538 aa18.06■□□□□ 0.48
TRPV1-206ENST00000571088 HSPA5P11021 654 aaKnown RBP18.04■□□□□ 0.48
TRPV1-206ENST00000571088 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.04■□□□□ 0.48
TRPV1-206ENST00000571088 FANCIQ9NVI1 1328 aa18.02■□□□□ 0.47
TRPV1-206ENST00000571088 ERICH6BQ5W0A0 696 aa18.01■□□□□ 0.47
TRPV1-206ENST00000571088 DDRGK1Q96HY6 314 aa18.01■□□□□ 0.47
TRPV1-206ENST00000571088 BIVM-ERCC5R4GMW8 1640 aa18■□□□□ 0.47
TRPV1-206ENST00000571088 TIAM1Q13009 1591 aa18■□□□□ 0.47
TRPV1-206ENST00000571088 FANCD2Q9BXW9 1451 aa18■□□□□ 0.47
TRPV1-206ENST00000571088 CCDC18Q5T9S5 1454 aa17.99■□□□□ 0.47
TRPV1-206ENST00000571088 TDRD9Q8NDG6 1382 aaKnown RBP17.99■□□□□ 0.47
TRPV1-206ENST00000571088 FGD6Q6ZV73 1430 aa17.96■□□□□ 0.47
TRPV1-206ENST00000571088 TSPY4P0CV99 314 aa17.95■□□□□ 0.46
TRPV1-206ENST00000571088 TSPY10P0CW01 314 aa17.95■□□□□ 0.46
TRPV1-206ENST00000571088 MPHOSPH9Q99550 1183 aa17.94■□□□□ 0.46
TRPV1-206ENST00000571088 CASKIN1Q8WXD9 1431 aa17.94■□□□□ 0.46
TRPV1-206ENST00000571088 UPF2Q9HAU5 1272 aaKnown RBP17.94■□□□□ 0.46
TRPV1-206ENST00000571088 CFDP1Q9UEE9 299 aaPredicted RBP17.93■□□□□ 0.46
TRPV1-206ENST00000571088 IPO9Q96P70 1041 aaKnown RBP17.93■□□□□ 0.46
TRPV1-206ENST00000571088 UACAQ9BZF9 1416 aa17.92■□□□□ 0.46
TRPV1-206ENST00000571088 FYCO1Q9BQS8 1478 aa17.92■□□□□ 0.46
TRPV1-206ENST00000571088 MAP3K1Q13233 1512 aa17.92■□□□□ 0.46
TRPV1-206ENST00000571088 KDM2AQ9Y2K7 1162 aa17.9■□□□□ 0.46
TRPV1-206ENST00000571088 RAD54L2Q9Y4B4 1467 aa17.89■□□□□ 0.45
TRPV1-206ENST00000571088 L3MBTL2Q969R5 705 aa17.88■□□□□ 0.45
TRPV1-206ENST00000571088 PDS5BQ9NTI5 1447 aa17.88■□□□□ 0.45
TRPV1-206ENST00000571088 WDR97A6NE52 1622 aa17.88■□□□□ 0.45
TRPV1-206ENST00000571088 FOXD1Q16676 465 aa17.87■□□□□ 0.45
TRPV1-206ENST00000571088 CHMP7Q8WUX9 453 aaPredicted RBP17.87■□□□□ 0.45
TRPV1-206ENST00000571088 MYOM3Q5VTT5 1437 aa17.86■□□□□ 0.45
TRPV1-206ENST00000571088 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.86■□□□□ 0.45
TRPV1-206ENST00000571088 EFCAB5A4FU69 1503 aa17.86■□□□□ 0.45
TRPV1-206ENST00000571088 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.85■□□□□ 0.45
TRPV1-206ENST00000571088 ANP32BQ92688 251 aaKnown RBP17.84■□□□□ 0.45
TRPV1-206ENST00000571088 PLEKHD1A6NEE1 506 aa17.83■□□□□ 0.45
TRPV1-206ENST00000571088 CARD11Q9BXL7 1154 aa17.83■□□□□ 0.45
TRPV1-206ENST00000571088 HSP90AA1P07900 732 aaKnown RBP17.83■□□□□ 0.44
TRPV1-206ENST00000571088 RGS3P49796 1198 aa17.8■□□□□ 0.44
TRPV1-206ENST00000571088 NAP1L5Q96NT1 182 aaPredicted RBP17.79■□□□□ 0.44
TRPV1-206ENST00000571088 NCOA2Q15596 1464 aa17.79■□□□□ 0.44
TRPV1-206ENST00000571088 ANO8Q9HCE9 1232 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms