RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 NUP160Q12769 1436 aa27.35■■□□□ 1.97
RPAIN-208ENST00000571043 CEP170Q5SW79 1584 aa27.32■■□□□ 1.96
RPAIN-208ENST00000571043 OSCARQ8IYS5 282 aa27.3■■□□□ 1.96
RPAIN-208ENST00000571043 PCGF6Q9BYE7 350 aa27.29■■□□□ 1.96
RPAIN-208ENST00000571043 TRIM26Q12899 539 aaPredicted RBP27.27■■□□□ 1.96
RPAIN-208ENST00000571043 KIAA0586Q9BVV6 1533 aa27.26■■□□□ 1.95
RPAIN-208ENST00000571043 CTTNBP2Q8WZ74 1663 aa27.26■■□□□ 1.95
RPAIN-208ENST00000571043 CLASP1Q7Z460 1538 aa27.17■■□□□ 1.94
RPAIN-208ENST00000571043 IQGAP2Q13576 1575 aa27.17■■□□□ 1.94
RPAIN-208ENST00000571043 JPH4Q96JJ6 628 aa27.14■■□□□ 1.94
RPAIN-208ENST00000571043 CLIP1P30622 1438 aa27.09■■□□□ 1.93
RPAIN-208ENST00000571043 SHROOM2Q13796 1616 aa27.06■■□□□ 1.92
RPAIN-208ENST00000571043 UGGT2Q9NYU1 1516 aa27.06■■□□□ 1.92
RPAIN-208ENST00000571043 RANGAP1P46060 587 aaPredicted RBP27.04■■□□□ 1.92
RPAIN-208ENST00000571043 PRG4Q92954 1404 aaPredicted RBP26.97■■□□□ 1.91
RPAIN-208ENST00000571043 DISP1Q96F81 1524 aa26.95■■□□□ 1.91
RPAIN-208ENST00000571043 SAMD9Q5K651 1589 aa26.95■■□□□ 1.9
RPAIN-208ENST00000571043 EFCAB5A4FU69 1503 aa26.94■■□□□ 1.9
RPAIN-208ENST00000571043 ARHGAP35Q9NRY4 1499 aa26.94■■□□□ 1.9
RPAIN-208ENST00000571043 CARMIL2Q6F5E8 1435 aa26.93■■□□□ 1.9
RPAIN-208ENST00000571043 VPS8Q8N3P4 1428 aa26.92■■□□□ 1.9
RPAIN-208ENST00000571043 P3H3Q8IVL6 736 aa26.9■■□□□ 1.9
RPAIN-208ENST00000571043 KIAA0556O60303 1618 aa26.9■■□□□ 1.9
RPAIN-208ENST00000571043 ERCC6L2Q5T890 1561 aa26.87■■□□□ 1.89
RPAIN-208ENST00000571043 PPARGC1BQ86YN6 1023 aaKnown RBP26.83■■□□□ 1.89
RPAIN-208ENST00000571043 HRCP23327 699 aa26.82■■□□□ 1.88
RPAIN-208ENST00000571043 ARAP1Q96P48 1450 aa26.82■■□□□ 1.88
RPAIN-208ENST00000571043 FHOD3Q2V2M9 1422 aa26.81■■□□□ 1.88
RPAIN-208ENST00000571043 ARHGEF11O15085 1522 aa26.79■■□□□ 1.88
RPAIN-208ENST00000571043 PTPRGP23470 1445 aa26.75■■□□□ 1.87
RPAIN-208ENST00000571043 RIMBP3CA6NJZ7 1639 aa26.72■■□□□ 1.87
RPAIN-208ENST00000571043 RIMBP3BA6NNM3 1639 aa26.72■■□□□ 1.87
RPAIN-208ENST00000571043 RIMBP3Q9UFD9 1639 aa26.72■■□□□ 1.87
RPAIN-208ENST00000571043 FMN1Q68DA7 1419 aa26.71■■□□□ 1.87
RPAIN-208ENST00000571043 DNAJC5Q9H3Z4 198 aa26.71■■□□□ 1.87
RPAIN-208ENST00000571043 TTBK1Q5TCY1 1321 aaPredicted RBP26.7■■□□□ 1.87
RPAIN-208ENST00000571043 APLP2Q06481 763 aa26.67■■□□□ 1.86
RPAIN-208ENST00000571043 PLB1Q6P1J6 1458 aa26.6■■□□□ 1.85
RPAIN-208ENST00000571043 ABCA8O94911 1581 aa26.58■■□□□ 1.85
RPAIN-208ENST00000571043 UACAQ9BZF9 1416 aa26.58■■□□□ 1.85
RPAIN-208ENST00000571043 CASKIN1Q8WXD9 1431 aa26.57■■□□□ 1.84
RPAIN-208ENST00000571043 CYB5RLQ6IPT4 315 aa26.56■■□□□ 1.84
RPAIN-208ENST00000571043 RAPGEF6Q8TEU7 1601 aa26.55■■□□□ 1.84
RPAIN-208ENST00000571043 PCF11O94913 1555 aaKnown RBP26.52■■□□□ 1.84
RPAIN-208ENST00000571043 FYCO1Q9BQS8 1478 aa26.52■■□□□ 1.84
RPAIN-208ENST00000571043 UHRF1BP1LA0JNW5 1464 aa26.52■■□□□ 1.84
RPAIN-208ENST00000571043 ATP1B4Q9UN42 357 aaPredicted RBP26.49■■□□□ 1.83
RPAIN-208ENST00000571043 ABCC2Q92887 1545 aa26.49■■□□□ 1.83
RPAIN-208ENST00000571043 NUP153P49790 1475 aaKnown RBP26.48■■□□□ 1.83
RPAIN-208ENST00000571043 HECW1Q76N89 1606 aa26.47■■□□□ 1.83
RPAIN-208ENST00000571043 ADCY10Q96PN6 1610 aa26.46■■□□□ 1.83
RPAIN-208ENST00000571043 LRRIQ1Q96JM4 1722 aa26.42■■□□□ 1.82
RPAIN-208ENST00000571043 EPRSP07814 1512 aaKnown RBP26.42■■□□□ 1.82
RPAIN-208ENST00000571043 MAP3K1Q13233 1512 aa26.4■■□□□ 1.82
RPAIN-208ENST00000571043 ATP10BO94823 1461 aa26.4■■□□□ 1.82
RPAIN-208ENST00000571043 ZEB1P37275 1124 aaPredicted RBP26.39■■□□□ 1.82
RPAIN-208ENST00000571043 KDM5BQ9UGL1 1544 aa26.39■■□□□ 1.82
RPAIN-208ENST00000571043 ARID3CA6NKF2 412 aa26.38■■□□□ 1.81
RPAIN-208ENST00000571043 CCDC18Q5T9S5 1454 aa26.37■■□□□ 1.81
RPAIN-208ENST00000571043 CDK13Q14004 1512 aaKnown RBP26.34■■□□□ 1.81
RPAIN-208ENST00000571043 NPM1P06748 294 aaKnown RBP eCLIP26.34■■□□□ 1.81
RPAIN-208ENST00000571043 KANK4Q5T7N3 995 aaPredicted RBP26.34■■□□□ 1.81
RPAIN-208ENST00000571043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.32■■□□□ 1.8
RPAIN-208ENST00000571043 HNRNPUL2Q1KMD3 747 aaKnown RBP26.32■■□□□ 1.8
RPAIN-208ENST00000571043 ZCCHC11Q5TAX3 1644 aaKnown RBP26.32■■□□□ 1.8
RPAIN-208ENST00000571043 TIAM1Q13009 1591 aa26.3■■□□□ 1.8
RPAIN-208ENST00000571043 CDK11AQ9UQ88 783 aaPredicted RBP26.29■■□□□ 1.8
RPAIN-208ENST00000571043 CFAP43Q8NDM7 1665 aa26.28■■□□□ 1.8
RPAIN-208ENST00000571043 PLEKHD1A6NEE1 506 aa26.25■■□□□ 1.79
RPAIN-208ENST00000571043 LRRC9Q6ZRR7 1453 aa26.21■■□□□ 1.79
RPAIN-208ENST00000571043 MAGI3Q5TCQ9 1506 aa26.2■■□□□ 1.78
RPAIN-208ENST00000571043 MTUS2Q5JR59 1369 aa26.18■■□□□ 1.78
RPAIN-208ENST00000571043 ASXL2Q76L83 1435 aa26.17■■□□□ 1.78
RPAIN-208ENST00000571043 RRBP1Q9P2E9 1410 aaKnown RBP26.17■■□□□ 1.78
RPAIN-208ENST00000571043 MAPKBP1O60336 1514 aa26.16■■□□□ 1.78
RPAIN-208ENST00000571043 TROQ12816 1431 aaPredicted RBP26.16■■□□□ 1.78
RPAIN-208ENST00000571043 WDR7Q9Y4E6 1490 aa26.13■■□□□ 1.77
RPAIN-208ENST00000571043 EHBP1L1Q8N3D4 1523 aa26.12■■□□□ 1.77
RPAIN-208ENST00000571043 CCER1Q8TC90 406 aaPredicted RBP26.09■■□□□ 1.77
RPAIN-208ENST00000571043 KCNH8Q96L42 1107 aa26.09■■□□□ 1.77
RPAIN-208ENST00000571043 CCNB3Q8WWL7 1395 aa26.06■■□□□ 1.76
RPAIN-208ENST00000571043 SUPT6HQ7KZ85 1726 aaKnown RBP26.04■■□□□ 1.76
RPAIN-208ENST00000571043 KIF14Q15058 1648 aa26.02■■□□□ 1.76
RPAIN-208ENST00000571043 NCOA2Q15596 1464 aa26.01■■□□□ 1.75
RPAIN-208ENST00000571043 ABCC10Q5T3U5 1492 aa25.98■■□□□ 1.75
RPAIN-208ENST00000571043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.98■■□□□ 1.75
RPAIN-208ENST00000571043 PHLDB1Q86UU1 1377 aa25.96■■□□□ 1.75
RPAIN-208ENST00000571043 ABCA9Q8IUA7 1624 aa25.94■■□□□ 1.74
RPAIN-208ENST00000571043 GLI2P10070 1586 aa25.94■■□□□ 1.74
RPAIN-208ENST00000571043 DIP2BQ9P265 1576 aa25.93■■□□□ 1.74
RPAIN-208ENST00000571043 FAM69CQ0P6D2 419 aa25.92■■□□□ 1.74
RPAIN-208ENST00000571043 TTC37Q6PGP7 1564 aa25.92■■□□□ 1.74
RPAIN-208ENST00000571043 KIF13AQ9H1H9 1805 aa25.89■■□□□ 1.74
RPAIN-208ENST00000571043 GPATCH8Q9UKJ3 1502 aaKnown RBP25.89■■□□□ 1.74
RPAIN-208ENST00000571043 CDC42BPAQ5VT25 1732 aa25.87■■□□□ 1.73
RPAIN-208ENST00000571043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.87■■□□□ 1.73
RPAIN-208ENST00000571043 MYOM3Q5VTT5 1437 aa25.87■■□□□ 1.73
RPAIN-208ENST00000571043 MYO5CQ9NQX4 1742 aa25.86■■□□□ 1.73
RPAIN-208ENST00000571043 PLCH2O75038 1416 aa25.85■■□□□ 1.73
RPAIN-208ENST00000571043 CD109Q6YHK3 1445 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms