RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 RUSC2Q8N2Y8 1516 aa36.47■■■■□ 3.43
RPA1-202ENST00000570451 CUL7Q14999 1698 aa36.42■■■■□ 3.42
RPA1-202ENST00000570451 KIAA0586Q9BVV6 1533 aa36.3■■■■□ 3.4
RPA1-202ENST00000570451 CARMIL1Q5VZK9 1371 aa36.28■■■■□ 3.4
RPA1-202ENST00000570451 NPM1P06748 294 aaKnown RBP eCLIP36.08■■■■□ 3.37
RPA1-202ENST00000570451 ADCY10Q96PN6 1610 aa36.03■■■■□ 3.36
RPA1-202ENST00000570451 TTBK1Q5TCY1 1321 aaPredicted RBP36.03■■■■□ 3.36
RPA1-202ENST00000570451 IQGAP2Q13576 1575 aa36.01■■■■□ 3.35
RPA1-202ENST00000570451 CARMIL2Q6F5E8 1435 aa35.98■■■■□ 3.35
RPA1-202ENST00000570451 RAPGEF2Q9Y4G8 1499 aa35.98■■■■□ 3.35
RPA1-202ENST00000570451 KIF13AQ9H1H9 1805 aa35.97■■■■□ 3.35
RPA1-202ENST00000570451 PTPRGP23470 1445 aa35.97■■■■□ 3.35
RPA1-202ENST00000570451 TNIKQ9UKE5 1360 aa35.91■■■■□ 3.34
RPA1-202ENST00000570451 MAPKBP1O60336 1514 aa35.91■■■■□ 3.34
RPA1-202ENST00000570451 FAM69CQ0P6D2 419 aa35.9■■■■□ 3.34
RPA1-202ENST00000570451 ABCC10Q5T3U5 1492 aa35.87■■■■□ 3.33
RPA1-202ENST00000570451 DISP1Q96F81 1524 aa35.8■■■■□ 3.32
RPA1-202ENST00000570451 DIP2BQ9P265 1576 aa35.8■■■■□ 3.32
RPA1-202ENST00000570451 UGGT2Q9NYU1 1516 aa35.76■■■■□ 3.31
RPA1-202ENST00000570451 ABCC2Q92887 1545 aa35.72■■■■□ 3.31
RPA1-202ENST00000570451 UACAQ9BZF9 1416 aa35.68■■■■□ 3.3
RPA1-202ENST00000570451 KIAA0556O60303 1618 aa35.68■■■■□ 3.3
RPA1-202ENST00000570451 CTTNBP2Q8WZ74 1663 aa35.67■■■■□ 3.3
RPA1-202ENST00000570451 UHRF1BP1LA0JNW5 1464 aa35.65■■■■□ 3.3
RPA1-202ENST00000570451 PRXQ9BXM0 1461 aa35.63■■■■□ 3.29
RPA1-202ENST00000570451 AEBP2Q6ZN18 517 aaPredicted RBP35.62■■■■□ 3.29
RPA1-202ENST00000570451 ASXL2Q76L83 1435 aa35.6■■■■□ 3.29
RPA1-202ENST00000570451 TSPOAP1O95153 1857 aa35.58■■■■□ 3.29
RPA1-202ENST00000570451 PLB1Q6P1J6 1458 aa35.56■■■■□ 3.28
RPA1-202ENST00000570451 GOLGA3Q08378 1498 aa35.53■■■■□ 3.28
RPA1-202ENST00000570451 KDM5BQ9UGL1 1544 aa35.49■■■■□ 3.27
RPA1-202ENST00000570451 CSRNP3Q8WYN3 585 aa35.46■■■■□ 3.27
RPA1-202ENST00000570451 KDM6BO15054 1643 aa35.46■■■■□ 3.27
RPA1-202ENST00000570451 ZCCHC11Q5TAX3 1644 aaKnown RBP35.46■■■■□ 3.27
RPA1-202ENST00000570451 GLI2P10070 1586 aa35.41■■■■□ 3.26
RPA1-202ENST00000570451 EPRSP07814 1512 aaKnown RBP35.37■■■■□ 3.25
RPA1-202ENST00000570451 P3H3Q8IVL6 736 aa35.32■■■■□ 3.24
RPA1-202ENST00000570451 EEA1Q15075 1411 aa35.32■■■■□ 3.24
RPA1-202ENST00000570451 ABCA8O94911 1581 aa35.31■■■■□ 3.24
RPA1-202ENST00000570451 PPRC1Q5VV67 1664 aaKnown RBP35.3■■■■□ 3.24
RPA1-202ENST00000570451 FAM9AQ8IZU1 332 aaPredicted RBP35.29■■■■□ 3.24
RPA1-202ENST00000570451 WDR7Q9Y4E6 1490 aa35.29■■■■□ 3.24
RPA1-202ENST00000570451 MAP3K4Q9Y6R4 1608 aa35.24■■■■□ 3.23
RPA1-202ENST00000570451 ARID3CA6NKF2 412 aa35.18■■■■□ 3.22
RPA1-202ENST00000570451 RANGAP1P46060 587 aaPredicted RBP35.18■■■■□ 3.22
RPA1-202ENST00000570451 KCNH8Q96L42 1107 aa35.17■■■■□ 3.22
RPA1-202ENST00000570451 TEX14Q8IWB6 1497 aa35.16■■■■□ 3.22
RPA1-202ENST00000570451 SAMD9Q5K651 1589 aa35.16■■■■□ 3.22
RPA1-202ENST00000570451 COL17A1Q9UMD9 1497 aaPredicted RBP35.06■■■■□ 3.2
RPA1-202ENST00000570451 CD109Q6YHK3 1445 aa35.05■■■■□ 3.2
RPA1-202ENST00000570451 ATP10BO94823 1461 aa35.03■■■■□ 3.2
RPA1-202ENST00000570451 CFAP43Q8NDM7 1665 aa35.02■■■■□ 3.2
RPA1-202ENST00000570451 KIF21BO75037 1637 aa35.02■■■■□ 3.2
RPA1-202ENST00000570451 FHOD3Q2V2M9 1422 aa35■■■■□ 3.19
RPA1-202ENST00000570451 RAPGEF6Q8TEU7 1601 aa35■■■■□ 3.19
RPA1-202ENST00000570451 CHIC1Q5VXU3 224 aa35■■■■□ 3.19
RPA1-202ENST00000570451 KDM4FA0A1W2PPD8 638 aa34.99■■■■□ 3.19
RPA1-202ENST00000570451 EHMT2Q96KQ7 1210 aa34.98■■■■□ 3.19
RPA1-202ENST00000570451 MAGI3Q5TCQ9 1506 aa34.97■■■■□ 3.19
RPA1-202ENST00000570451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.96■■■■□ 3.19
RPA1-202ENST00000570451 HNRNPUL2Q1KMD3 747 aaKnown RBP34.96■■■■□ 3.19
RPA1-202ENST00000570451 NUP153P49790 1475 aaKnown RBP34.87■■■■□ 3.17
RPA1-202ENST00000570451 EFCAB5A4FU69 1503 aa34.86■■■■□ 3.17
RPA1-202ENST00000570451 UBTFP17480 764 aaKnown RBP34.86■■■■□ 3.17
RPA1-202ENST00000570451 ADGRL1O94910 1474 aa34.79■■■■□ 3.16
RPA1-202ENST00000570451 ABCA9Q8IUA7 1624 aa34.79■■■■□ 3.16
RPA1-202ENST00000570451 PLEKHD1A6NEE1 506 aa34.7■■■■□ 3.15
RPA1-202ENST00000570451 ARAP3Q8WWN8 1544 aa34.68■■■■□ 3.14
RPA1-202ENST00000570451 PHLDB1Q86UU1 1377 aa34.63■■■■□ 3.13
RPA1-202ENST00000570451 ATP1B4Q9UN42 357 aaPredicted RBP34.62■■■■□ 3.13
RPA1-202ENST00000570451 NEO1Q92859 1461 aa34.6■■■■□ 3.13
RPA1-202ENST00000570451 CDK13Q14004 1512 aaKnown RBP34.6■■■■□ 3.13
RPA1-202ENST00000570451 ARHGAP35Q9NRY4 1499 aa34.59■■■■□ 3.13
RPA1-202ENST00000570451 FMN1Q68DA7 1419 aa34.57■■■■□ 3.13
RPA1-202ENST00000570451 RAPGEF3O95398 923 aa34.56■■■■□ 3.12
RPA1-202ENST00000570451 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.51■■■■□ 3.12
RPA1-202ENST00000570451 HECW1Q76N89 1606 aa34.51■■■■□ 3.11
RPA1-202ENST00000570451 TTC37Q6PGP7 1564 aa34.49■■■■□ 3.11
RPA1-202ENST00000570451 FANCAO15360 1455 aa34.45■■■■□ 3.1
RPA1-202ENST00000570451 FRMPD1Q5SYB0 1578 aa34.44■■■■□ 3.1
RPA1-202ENST00000570451 AKNAQ7Z591 1439 aa34.42■■■■□ 3.1
RPA1-202ENST00000570451 CFAP74Q9C0B2 1584 aa34.41■■■■□ 3.1
RPA1-202ENST00000570451 DENND4BO75064 1496 aaPredicted RBP34.39■■■■□ 3.1
RPA1-202ENST00000570451 CDK11AQ9UQ88 783 aaPredicted RBP34.38■■■■□ 3.09
RPA1-202ENST00000570451 ARID4BQ4LE39 1312 aaPredicted RBP34.31■■■■□ 3.08
RPA1-202ENST00000570451 RICTORQ6R327 1708 aa34.31■■■■□ 3.08
RPA1-202ENST00000570451 PLCH2O75038 1416 aa34.3■■■■□ 3.08
RPA1-202ENST00000570451 KIF14Q15058 1648 aa34.26■■■■□ 3.07
RPA1-202ENST00000570451 ARHGEF40Q8TER5 1519 aa34.25■■■■□ 3.07
RPA1-202ENST00000570451 LRRIQ1Q96JM4 1722 aa34.25■■■■□ 3.07
RPA1-202ENST00000570451 TROQ12816 1431 aaPredicted RBP34.25■■■■□ 3.07
RPA1-202ENST00000570451 HECW2Q9P2P5 1572 aa34.24■■■■□ 3.07
RPA1-202ENST00000570451 CLIP1P30622 1438 aa34.24■■■■□ 3.07
RPA1-202ENST00000570451 PCF11O94913 1555 aaKnown RBP34.23■■■■□ 3.07
RPA1-202ENST00000570451 MYO5CQ9NQX4 1742 aa34.23■■■■□ 3.07
RPA1-202ENST00000570451 CASKIN1Q8WXD9 1431 aa34.21■■■■□ 3.07
RPA1-202ENST00000570451 SCAPERQ9BY12 1400 aa34.21■■■■□ 3.07
RPA1-202ENST00000570451 EFCAB2Q5VUJ9 269 aa34.2■■■■□ 3.07
RPA1-202ENST00000570451 ADAMTSL3P82987 1691 aa34.19■■■■□ 3.06
RPA1-202ENST00000570451 ZMYM4Q5VZL5 1548 aa34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms