RNA–Protein interactions for RNA: ENST00000570166.1

PKM-225, Transcript of pyruvate kinase M1/2, humanhuman

TSL 2

Gene PKM, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-225ENST00000570166 IGF1RP08069 1367 aa10.59□□□□□ -0.71
PKM-225ENST00000570166 AQRO60306 1485 aaKnown RBP eCLIP10.59□□□□□ -0.717e-13■■■■■ 38.8
PKM-225ENST00000570166 TOPBP1Q92547 1522 aa10.58□□□□□ -0.72
PKM-225ENST00000570166 ABCA5Q8WWZ7 1642 aa10.58□□□□□ -0.72
PKM-225ENST00000570166 THOC2Q8NI27 1593 aaKnown RBP10.58□□□□□ -0.72
PKM-225ENST00000570166 CARMIL1Q5VZK9 1371 aa10.58□□□□□ -0.72
PKM-225ENST00000570166 LRRC9Q6ZRR7 1453 aa10.57□□□□□ -0.72
PKM-225ENST00000570166 POLA1P09884 1462 aaPredicted RBP10.55□□□□□ -0.72
PKM-225ENST00000570166 NEUROD1Q13562 356 aa10.55□□□□□ -0.72
PKM-225ENST00000570166 SAMD9Q5K651 1589 aa10.55□□□□□ -0.72
PKM-225ENST00000570166 RANGAP1P46060 587 aaPredicted RBP10.54□□□□□ -0.72
PKM-225ENST00000570166 KANK4Q5T7N3 995 aaPredicted RBP10.52□□□□□ -0.73
PKM-225ENST00000570166 PBRM1Q86U86 1689 aa10.51□□□□□ -0.73
PKM-225ENST00000570166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.51□□□□□ -0.73
PKM-225ENST00000570166 CASKIN1Q8WXD9 1431 aa10.5□□□□□ -0.73
PKM-225ENST00000570166 MAPKBP1O60336 1514 aa10.5□□□□□ -0.73
PKM-225ENST00000570166 LRRIQ1Q96JM4 1722 aa10.5□□□□□ -0.73
PKM-225ENST00000570166 SUPT6HQ7KZ85 1726 aaKnown RBP10.49□□□□□ -0.73
PKM-225ENST00000570166 FMN1Q68DA7 1419 aa10.49□□□□□ -0.73
PKM-225ENST00000570166 SETD5Q9C0A6 1442 aa10.47□□□□□ -0.73
PKM-225ENST00000570166 SNAPC4Q5SXM2 1469 aa10.47□□□□□ -0.73
PKM-225ENST00000570166 RAD54L2Q9Y4B4 1467 aa10.47□□□□□ -0.73
PKM-225ENST00000570166 URB2Q14146 1524 aaKnown RBP10.47□□□□□ -0.73
PKM-225ENST00000570166 EHBP1L1Q8N3D4 1523 aa10.47□□□□□ -0.73
PKM-225ENST00000570166 GTF3C3Q9Y5Q9 886 aa10.46□□□□□ -0.73
PKM-225ENST00000570166 RAB3GAP2Q9H2M9 1393 aa10.46□□□□□ -0.74
PKM-225ENST00000570166 GCC2Q8IWJ2 1684 aa10.44□□□□□ -0.74
PKM-225ENST00000570166 TARBP1Q13395 1621 aaKnown RBP10.44□□□□□ -0.74
PKM-225ENST00000570166 NESP48681 1621 aa10.44□□□□□ -0.74
PKM-225ENST00000570166 HECW1Q76N89 1606 aa10.44□□□□□ -0.74
PKM-225ENST00000570166 FHOD3Q2V2M9 1422 aa10.43□□□□□ -0.74
PKM-225ENST00000570166 PDS5BQ9NTI5 1447 aa10.43□□□□□ -0.74
PKM-225ENST00000570166 PHLDB1Q86UU1 1377 aa10.43□□□□□ -0.74
PKM-225ENST00000570166 MIER1Q8N108 512 aa10.42□□□□□ -0.74
PKM-225ENST00000570166 GAPVD1Q14C86 1478 aa10.42□□□□□ -0.74
PKM-225ENST00000570166 CCDC18Q5T9S5 1454 aa10.42□□□□□ -0.74
PKM-225ENST00000570166 ADAMTS12P58397 1594 aa10.41□□□□□ -0.74
PKM-225ENST00000570166 GRIN2BQ13224 1484 aa10.41□□□□□ -0.74
PKM-225ENST00000570166 PTPN23Q9H3S7 1636 aa10.4□□□□□ -0.74
PKM-225ENST00000570166 FGD6Q6ZV73 1430 aa10.4□□□□□ -0.75
PKM-225ENST00000570166 TIMELESSQ9UNS1 1208 aa10.38□□□□□ -0.75
PKM-225ENST00000570166 IQGAP2Q13576 1575 aa10.38□□□□□ -0.75
PKM-225ENST00000570166 ARHGEF11O15085 1522 aa10.38□□□□□ -0.75
PKM-225ENST00000570166 UGGT2Q9NYU1 1516 aa10.38□□□□□ -0.75
PKM-225ENST00000570166 MYOM3Q5VTT5 1437 aa10.35□□□□□ -0.75
PKM-225ENST00000570166 YTHDC1Q96MU7 727 aaKnown RBP10.35□□□□□ -0.75
PKM-225ENST00000570166 NCOA2Q15596 1464 aa10.35□□□□□ -0.75
PKM-225ENST00000570166 HFM1A2PYH4 1435 aa10.34□□□□□ -0.75
PKM-225ENST00000570166 MTUS2Q5JR59 1369 aa10.34□□□□□ -0.75
PKM-225ENST00000570166 AKNAQ7Z591 1439 aa10.33□□□□□ -0.76
PKM-225ENST00000570166 TCOF1Q13428 1488 aaKnown RBP10.33□□□□□ -0.76
PKM-225ENST00000570166 WDR62O43379 1518 aa10.33□□□□□ -0.76
PKM-225ENST00000570166 UACAQ9BZF9 1416 aa10.33□□□□□ -0.76
PKM-225ENST00000570166 ITGAEP38570 1179 aa10.32□□□□□ -0.76
PKM-225ENST00000570166 DNAJC5BQ9UF47 199 aa10.32□□□□□ -0.76
PKM-225ENST00000570166 MRC2Q9UBG0 1479 aa10.31□□□□□ -0.76
PKM-225ENST00000570166 FAM50AQ14320 339 aaKnown RBP10.31□□□□□ -0.76
PKM-225ENST00000570166 ITSN2Q9NZM3 1697 aa10.3□□□□□ -0.76
PKM-225ENST00000570166 POLR1AO95602 1720 aaPredicted RBP10.29□□□□□ -0.76
PKM-225ENST00000570166 ADGBQ8N7X0 1667 aa10.28□□□□□ -0.76
PKM-225ENST00000570166 MAGI3Q5TCQ9 1506 aa10.28□□□□□ -0.76
PKM-225ENST00000570166 KIAA0556O60303 1618 aa10.27□□□□□ -0.77
PKM-225ENST00000570166 TDRD9Q8NDG6 1382 aaKnown RBP10.26□□□□□ -0.77
PKM-225ENST00000570166 MIA2Q96PC5 1412 aa10.26□□□□□ -0.77
PKM-225ENST00000570166 P3H3Q8IVL6 736 aa10.26□□□□□ -0.77
PKM-225ENST00000570166 DNMT1P26358 1616 aaKnown RBP10.25□□□□□ -0.77
PKM-225ENST00000570166 RAPGEF6Q8TEU7 1601 aa10.25□□□□□ -0.77
PKM-225ENST00000570166 ADCY10Q96PN6 1610 aa10.25□□□□□ -0.77
PKM-225ENST00000570166 NAIPQ13075 1403 aa10.25□□□□□ -0.77
PKM-225ENST00000570166 IFT140Q96RY7 1462 aa10.25□□□□□ -0.77
PKM-225ENST00000570166 EPRSP07814 1512 aaKnown RBP10.25□□□□□ -0.77
PKM-225ENST00000570166 MYT1Q01538 1121 aa10.25□□□□□ -0.77
PKM-225ENST00000570166 CROCC2H7BZ55 1655 aa10.25□□□□□ -0.77
PKM-225ENST00000570166 EIF4G3O43432 1585 aaKnown RBP10.24□□□□□ -0.77
PKM-225ENST00000570166 ATP1B4Q9UN42 357 aaPredicted RBP10.24□□□□□ -0.77
PKM-225ENST00000570166 TONSLQ96HA7 1378 aa10.24□□□□□ -0.77
PKM-225ENST00000570166 PTPRKQ15262 1439 aa10.21□□□□□ -0.78
PKM-225ENST00000570166 KDM5BQ9UGL1 1544 aa10.21□□□□□ -0.78
PKM-225ENST00000570166 CDK13Q14004 1512 aaKnown RBP10.19□□□□□ -0.78
PKM-225ENST00000570166 KIAA0586Q9BVV6 1533 aa10.19□□□□□ -0.78
PKM-225ENST00000570166 PPP1R15AO75807 674 aaPredicted RBP10.19□□□□□ -0.78
PKM-225ENST00000570166 ROCK1Q13464 1354 aa10.17□□□□□ -0.78
PKM-225ENST00000570166 CCER2I3L3R5 266 aa10.17□□□□□ -0.78
PKM-225ENST00000570166 SIN3AQ96ST3 1273 aa10.17□□□□□ -0.78
PKM-225ENST00000570166 GRIN2AQ12879 1464 aa10.17□□□□□ -0.78
PKM-225ENST00000570166 MAGI1Q96QZ7 1491 aaPredicted RBP10.17□□□□□ -0.78
PKM-225ENST00000570166 KDM6BO15054 1643 aa10.16□□□□□ -0.78
PKM-225ENST00000570166 DISP1Q96F81 1524 aa10.16□□□□□ -0.78
PKM-225ENST00000570166 SUPT16HQ9Y5B9 1047 aaKnown RBP10.14□□□□□ -0.79
PKM-225ENST00000570166 DAPK1P53355 1430 aa10.14□□□□□ -0.79
PKM-225ENST00000570166 NUP153P49790 1475 aaKnown RBP10.13□□□□□ -0.79
PKM-225ENST00000570166 KIF14Q15058 1648 aa10.11□□□□□ -0.79
PKM-225ENST00000570166 DENND4BO75064 1496 aaPredicted RBP10.11□□□□□ -0.79
PKM-225ENST00000570166 CDC42BPAQ5VT25 1732 aa10.11□□□□□ -0.79
PKM-225ENST00000570166 CEP170Q5SW79 1584 aa10.11□□□□□ -0.79
PKM-225ENST00000570166 ANP32CO43423 234 aa10.11□□□□□ -0.79
PKM-225ENST00000570166 ZNF608Q9ULD9 1512 aaPredicted RBP10.11□□□□□ -0.79
PKM-225ENST00000570166 ADGRL2O95490 1459 aa10.1□□□□□ -0.79
PKM-225ENST00000570166 DDX10Q13206 875 aaKnown RBP10.1□□□□□ -0.79
PKM-225ENST00000570166 SYNJ2O15056 1496 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms