RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 KIAA0586Q9BVV6 1533 aa21.55■■□□□ 1.04
CNOT1-217ENST00000569263 SHROOM2Q13796 1616 aa21.55■■□□□ 1.04
CNOT1-217ENST00000569263 IQGAP2Q13576 1575 aa21.53■■□□□ 1.04
CNOT1-217ENST00000569263 RIMBP3CA6NJZ7 1639 aa21.53■■□□□ 1.04
CNOT1-217ENST00000569263 RIMBP3BA6NNM3 1639 aa21.53■■□□□ 1.04
CNOT1-217ENST00000569263 RIMBP3Q9UFD9 1639 aa21.53■■□□□ 1.04
CNOT1-217ENST00000569263 ARHGEF11O15085 1522 aa21.53■■□□□ 1.04
CNOT1-217ENST00000569263 GOLGA3Q08378 1498 aa21.47■■□□□ 1.03
CNOT1-217ENST00000569263 JPH4Q96JJ6 628 aa21.44■■□□□ 1.02
CNOT1-217ENST00000569263 PRG4Q92954 1404 aaPredicted RBP21.43■■□□□ 1.02
CNOT1-217ENST00000569263 ERCC6L2Q5T890 1561 aa21.42■■□□□ 1.02
CNOT1-217ENST00000569263 EHMT2Q96KQ7 1210 aa21.42■■□□□ 1.02
CNOT1-217ENST00000569263 UGGT2Q9NYU1 1516 aa21.38■■□□□ 1.01
CNOT1-217ENST00000569263 UBTFP17480 764 aaKnown RBP21.36■■□□□ 1.01
CNOT1-217ENST00000569263 ARAP1Q96P48 1450 aa21.36■■□□□ 1.01
CNOT1-217ENST00000569263 CARMIL2Q6F5E8 1435 aa21.35■■□□□ 1.01
CNOT1-217ENST00000569263 KIAA0556O60303 1618 aa21.32■■□□□ 1
CNOT1-217ENST00000569263 DISP1Q96F81 1524 aa21.29■■□□□ 1
CNOT1-217ENST00000569263 CYB5RLQ6IPT4 315 aa21.27■■□□□ 1
CNOT1-217ENST00000569263 SAMD9Q5K651 1589 aa21.25■□□□□ 0.99
CNOT1-217ENST00000569263 RANGAP1P46060 587 aaPredicted RBP21.24■□□□□ 0.99
CNOT1-217ENST00000569263 TNIKQ9UKE5 1360 aa21.23■□□□□ 0.99
CNOT1-217ENST00000569263 EFCAB5A4FU69 1503 aa21.22■□□□□ 0.99
CNOT1-217ENST00000569263 TTBK1Q5TCY1 1321 aaPredicted RBP21.2■□□□□ 0.98
CNOT1-217ENST00000569263 PTPRGP23470 1445 aa21.2■□□□□ 0.98
CNOT1-217ENST00000569263 P3H3Q8IVL6 736 aa21.15■□□□□ 0.98
CNOT1-217ENST00000569263 FHOD3Q2V2M9 1422 aa21.12■□□□□ 0.97
CNOT1-217ENST00000569263 LOC105371045A0A1W2PR82 267 aa21.11■□□□□ 0.97
CNOT1-217ENST00000569263 ARHGAP35Q9NRY4 1499 aa21.1■□□□□ 0.97
CNOT1-217ENST00000569263 ADCY10Q96PN6 1610 aa21.1■□□□□ 0.97
CNOT1-217ENST00000569263 CLIP1P30622 1438 aa21.07■□□□□ 0.96
CNOT1-217ENST00000569263 UACAQ9BZF9 1416 aa21.06■□□□□ 0.96
CNOT1-217ENST00000569263 ABCC2Q92887 1545 aa21.06■□□□□ 0.96
CNOT1-217ENST00000569263 PLB1Q6P1J6 1458 aa21.04■□□□□ 0.96
CNOT1-217ENST00000569263 ABCA8O94911 1581 aa21.04■□□□□ 0.96
CNOT1-217ENST00000569263 CEP162Q5TB80 1403 aa21.04■□□□□ 0.96
CNOT1-217ENST00000569263 UHRF1BP1LA0JNW5 1464 aa21.03■□□□□ 0.96
CNOT1-217ENST00000569263 RAPGEF6Q8TEU7 1601 aa21.02■□□□□ 0.96
CNOT1-217ENST00000569263 FMN1Q68DA7 1419 aa20.99■□□□□ 0.95
CNOT1-217ENST00000569263 NPM1P06748 294 aaKnown RBP eCLIP20.99■□□□□ 0.95
CNOT1-217ENST00000569263 ZCCHC11Q5TAX3 1644 aaKnown RBP20.96■□□□□ 0.95
CNOT1-217ENST00000569263 KDM5BQ9UGL1 1544 aa20.93■□□□□ 0.94
CNOT1-217ENST00000569263 HECW1Q76N89 1606 aa20.92■□□□□ 0.94
CNOT1-217ENST00000569263 MAPKBP1O60336 1514 aa20.91■□□□□ 0.94
CNOT1-217ENST00000569263 PCF11O94913 1555 aaKnown RBP20.89■□□□□ 0.94
CNOT1-217ENST00000569263 NUP153P49790 1475 aaKnown RBP20.88■□□□□ 0.93
CNOT1-217ENST00000569263 ARID3CA6NKF2 412 aa20.86■□□□□ 0.93
CNOT1-217ENST00000569263 ATP1B4Q9UN42 357 aaPredicted RBP20.85■□□□□ 0.93
CNOT1-217ENST00000569263 ATP10BO94823 1461 aa20.83■□□□□ 0.93
CNOT1-217ENST00000569263 FYCO1Q9BQS8 1478 aa20.83■□□□□ 0.93
CNOT1-217ENST00000569263 ASXL2Q76L83 1435 aa20.83■□□□□ 0.93
CNOT1-217ENST00000569263 CASKIN1Q8WXD9 1431 aa20.83■□□□□ 0.93
CNOT1-217ENST00000569263 LRRIQ1Q96JM4 1722 aa20.81■□□□□ 0.92
CNOT1-217ENST00000569263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.81■□□□□ 0.92
CNOT1-217ENST00000569263 HNRNPUL2Q1KMD3 747 aaKnown RBP20.81■□□□□ 0.92
CNOT1-217ENST00000569263 CDK13Q14004 1512 aaKnown RBP20.8■□□□□ 0.92
CNOT1-217ENST00000569263 TRHP20396 242 aaPredicted RBP20.8■□□□□ 0.92
CNOT1-217ENST00000569263 EPRSP07814 1512 aaKnown RBP20.79■□□□□ 0.92
CNOT1-217ENST00000569263 KIF13AQ9H1H9 1805 aa20.78■□□□□ 0.92
CNOT1-217ENST00000569263 WDR7Q9Y4E6 1490 aa20.78■□□□□ 0.92
CNOT1-217ENST00000569263 DIP2BQ9P265 1576 aa20.77■□□□□ 0.92
CNOT1-217ENST00000569263 CCDC18Q5T9S5 1454 aa20.77■□□□□ 0.92
CNOT1-217ENST00000569263 VPS8Q8N3P4 1428 aa20.77■□□□□ 0.91
CNOT1-217ENST00000569263 ABCC10Q5T3U5 1492 aa20.75■□□□□ 0.91
CNOT1-217ENST00000569263 FAM69CQ0P6D2 419 aa20.69■□□□□ 0.9
CNOT1-217ENST00000569263 GLI2P10070 1586 aa20.68■□□□□ 0.9
CNOT1-217ENST00000569263 PLEKHD1A6NEE1 506 aa20.68■□□□□ 0.9
CNOT1-217ENST00000569263 CFAP43Q8NDM7 1665 aa20.67■□□□□ 0.9
CNOT1-217ENST00000569263 CDK11AQ9UQ88 783 aaPredicted RBP20.67■□□□□ 0.9
CNOT1-217ENST00000569263 KCNH8Q96L42 1107 aa20.66■□□□□ 0.9
CNOT1-217ENST00000569263 TSPOAP1O95153 1857 aa20.64■□□□□ 0.9
CNOT1-217ENST00000569263 MAP3K4Q9Y6R4 1608 aa20.64■□□□□ 0.89
CNOT1-217ENST00000569263 KIF14Q15058 1648 aa20.62■□□□□ 0.89
CNOT1-217ENST00000569263 ABCA9Q8IUA7 1624 aa20.61■□□□□ 0.89
CNOT1-217ENST00000569263 TIAM1Q13009 1591 aa20.61■□□□□ 0.89
CNOT1-217ENST00000569263 TROQ12816 1431 aaPredicted RBP20.61■□□□□ 0.89
CNOT1-217ENST00000569263 MAGI3Q5TCQ9 1506 aa20.59■□□□□ 0.89
CNOT1-217ENST00000569263 EHBP1L1Q8N3D4 1523 aa20.57■□□□□ 0.88
CNOT1-217ENST00000569263 TTC37Q6PGP7 1564 aa20.56■□□□□ 0.88
CNOT1-217ENST00000569263 MTUS2Q5JR59 1369 aa20.56■□□□□ 0.88
CNOT1-217ENST00000569263 PPRC1Q5VV67 1664 aaKnown RBP20.55■□□□□ 0.88
CNOT1-217ENST00000569263 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.55■□□□□ 0.88
CNOT1-217ENST00000569263 APLP2Q06481 763 aa20.55■□□□□ 0.88
CNOT1-217ENST00000569263 CD109Q6YHK3 1445 aa20.54■□□□□ 0.88
CNOT1-217ENST00000569263 MAP3K1Q13233 1512 aa20.54■□□□□ 0.88
CNOT1-217ENST00000569263 MYO5CQ9NQX4 1742 aa20.53■□□□□ 0.88
CNOT1-217ENST00000569263 TEX14Q8IWB6 1497 aa20.51■□□□□ 0.87
CNOT1-217ENST00000569263 SUPT6HQ7KZ85 1726 aaKnown RBP20.49■□□□□ 0.87
CNOT1-217ENST00000569263 LRRC9Q6ZRR7 1453 aa20.48■□□□□ 0.87
CNOT1-217ENST00000569263 CFAP74Q9C0B2 1584 aa20.46■□□□□ 0.87
CNOT1-217ENST00000569263 PREX2Q70Z35 1606 aa20.44■□□□□ 0.86
CNOT1-217ENST00000569263 CDC42BPAQ5VT25 1732 aa20.44■□□□□ 0.86
CNOT1-217ENST00000569263 ITSN2Q9NZM3 1697 aa20.42■□□□□ 0.86
CNOT1-217ENST00000569263 ARHGAP5Q13017 1502 aa20.41■□□□□ 0.86
CNOT1-217ENST00000569263 ARAP3Q8WWN8 1544 aa20.41■□□□□ 0.86
CNOT1-217ENST00000569263 KDM6BO15054 1643 aa20.41■□□□□ 0.86
CNOT1-217ENST00000569263 CDC42BPBQ9Y5S2 1711 aa20.41■□□□□ 0.86
CNOT1-217ENST00000569263 FANCAO15360 1455 aa20.4■□□□□ 0.86
CNOT1-217ENST00000569263 PLCH2O75038 1416 aa20.4■□□□□ 0.86
CNOT1-217ENST00000569263 NCOA2Q15596 1464 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms