RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 CUL7Q14999 1698 aa27.09■■□□□ 1.93
SCAMP2-210ENST00000569124 JPH4Q96JJ6 628 aa27.04■■□□□ 1.92
SCAMP2-210ENST00000569124 ADCY10Q96PN6 1610 aa27.01■■□□□ 1.91
SCAMP2-210ENST00000569124 MAPKBP1O60336 1514 aa26.99■■□□□ 1.91
SCAMP2-210ENST00000569124 DIP2BQ9P265 1576 aa26.97■■□□□ 1.91
SCAMP2-210ENST00000569124 KIAA0586Q9BVV6 1533 aa26.93■■□□□ 1.9
SCAMP2-210ENST00000569124 ABCC10Q5T3U5 1492 aa26.93■■□□□ 1.9
SCAMP2-210ENST00000569124 KIF27Q86VH2 1401 aa26.92■■□□□ 1.9
SCAMP2-210ENST00000569124 TSPOAP1O95153 1857 aa26.92■■□□□ 1.9
SCAMP2-210ENST00000569124 NPM1P06748 294 aaKnown RBP eCLIP26.89■■□□□ 1.9
SCAMP2-210ENST00000569124 IGF1RP08069 1367 aa26.84■■□□□ 1.89
SCAMP2-210ENST00000569124 FAM69CQ0P6D2 419 aa26.83■■□□□ 1.89
SCAMP2-210ENST00000569124 KDM6BO15054 1643 aa26.81■■□□□ 1.88
SCAMP2-210ENST00000569124 IQGAP2Q13576 1575 aa26.76■■□□□ 1.87
SCAMP2-210ENST00000569124 CARMIL1Q5VZK9 1371 aa26.71■■□□□ 1.87
SCAMP2-210ENST00000569124 CARMIL2Q6F5E8 1435 aa26.69■■□□□ 1.86
SCAMP2-210ENST00000569124 PTPRGP23470 1445 aa26.68■■□□□ 1.86
SCAMP2-210ENST00000569124 ABCC2Q92887 1545 aa26.65■■□□□ 1.86
SCAMP2-210ENST00000569124 TNIKQ9UKE5 1360 aa26.64■■□□□ 1.86
SCAMP2-210ENST00000569124 PPRC1Q5VV67 1664 aaKnown RBP26.62■■□□□ 1.85
SCAMP2-210ENST00000569124 TTBK1Q5TCY1 1321 aaPredicted RBP26.6■■□□□ 1.85
SCAMP2-210ENST00000569124 GLI2P10070 1586 aa26.58■■□□□ 1.85
SCAMP2-210ENST00000569124 CTTNBP2Q8WZ74 1663 aa26.57■■□□□ 1.84
SCAMP2-210ENST00000569124 UHRF1BP1LA0JNW5 1464 aa26.55■■□□□ 1.84
SCAMP2-210ENST00000569124 PLB1Q6P1J6 1458 aa26.55■■□□□ 1.84
SCAMP2-210ENST00000569124 DISP1Q96F81 1524 aa26.55■■□□□ 1.84
SCAMP2-210ENST00000569124 ASXL2Q76L83 1435 aa26.54■■□□□ 1.84
SCAMP2-210ENST00000569124 KIAA0556O60303 1618 aa26.53■■□□□ 1.84
SCAMP2-210ENST00000569124 ZCCHC11Q5TAX3 1644 aaKnown RBP26.52■■□□□ 1.84
SCAMP2-210ENST00000569124 UGGT2Q9NYU1 1516 aa26.51■■□□□ 1.83
SCAMP2-210ENST00000569124 RAPGEF2Q9Y4G8 1499 aa26.5■■□□□ 1.83
SCAMP2-210ENST00000569124 UACAQ9BZF9 1416 aa26.5■■□□□ 1.83
SCAMP2-210ENST00000569124 MAP3K4Q9Y6R4 1608 aa26.49■■□□□ 1.83
SCAMP2-210ENST00000569124 KDM5BQ9UGL1 1544 aa26.44■■□□□ 1.82
SCAMP2-210ENST00000569124 EPRSP07814 1512 aaKnown RBP26.4■■□□□ 1.82
SCAMP2-210ENST00000569124 KDM4FA0A1W2PPD8 638 aa26.39■■□□□ 1.82
SCAMP2-210ENST00000569124 TEX14Q8IWB6 1497 aa26.36■■□□□ 1.81
SCAMP2-210ENST00000569124 CFAP43Q8NDM7 1665 aa26.31■■□□□ 1.8
SCAMP2-210ENST00000569124 WDR7Q9Y4E6 1490 aa26.3■■□□□ 1.8
SCAMP2-210ENST00000569124 ADGRL1O94910 1474 aa26.29■■□□□ 1.8
SCAMP2-210ENST00000569124 GOLGA3Q08378 1498 aa26.29■■□□□ 1.8
SCAMP2-210ENST00000569124 ABCA8O94911 1581 aa26.24■■□□□ 1.79
SCAMP2-210ENST00000569124 COL17A1Q9UMD9 1497 aaPredicted RBP26.23■■□□□ 1.79
SCAMP2-210ENST00000569124 PRXQ9BXM0 1461 aa26.14■■□□□ 1.78
SCAMP2-210ENST00000569124 MAGI3Q5TCQ9 1506 aa26.13■■□□□ 1.77
SCAMP2-210ENST00000569124 CD109Q6YHK3 1445 aa26.1■■□□□ 1.77
SCAMP2-210ENST00000569124 KIF21BO75037 1637 aa26.06■■□□□ 1.76
SCAMP2-210ENST00000569124 HECW2Q9P2P5 1572 aa26.06■■□□□ 1.76
SCAMP2-210ENST00000569124 KCNH8Q96L42 1107 aa26.02■■□□□ 1.76
SCAMP2-210ENST00000569124 SAMD9Q5K651 1589 aa26.02■■□□□ 1.76
SCAMP2-210ENST00000569124 ABCA9Q8IUA7 1624 aa26■■□□□ 1.75
SCAMP2-210ENST00000569124 RAPGEF6Q8TEU7 1601 aa25.99■■□□□ 1.75
SCAMP2-210ENST00000569124 FAM9AQ8IZU1 332 aaPredicted RBP25.98■■□□□ 1.75
SCAMP2-210ENST00000569124 ARAP3Q8WWN8 1544 aa25.93■■□□□ 1.74
SCAMP2-210ENST00000569124 ATP10BO94823 1461 aa25.92■■□□□ 1.74
SCAMP2-210ENST00000569124 ARID3CA6NKF2 412 aa25.89■■□□□ 1.74
SCAMP2-210ENST00000569124 P3H3Q8IVL6 736 aa25.88■■□□□ 1.73
SCAMP2-210ENST00000569124 ILDR1Q86SU0 546 aaPredicted RBP25.83■■□□□ 1.73
SCAMP2-210ENST00000569124 PHLDB1Q86UU1 1377 aa25.82■■□□□ 1.72
SCAMP2-210ENST00000569124 ADAMTSL3P82987 1691 aa25.8■■□□□ 1.72
SCAMP2-210ENST00000569124 NEO1Q92859 1461 aa25.8■■□□□ 1.72
SCAMP2-210ENST00000569124 CSRNP3Q8WYN3 585 aa25.8■■□□□ 1.72
SCAMP2-210ENST00000569124 FRMPD1Q5SYB0 1578 aa25.79■■□□□ 1.72
SCAMP2-210ENST00000569124 CHIC1Q5VXU3 224 aa25.79■■□□□ 1.72
SCAMP2-210ENST00000569124 EEA1Q15075 1411 aa25.78■■□□□ 1.72
SCAMP2-210ENST00000569124 NUP153P49790 1475 aaKnown RBP25.77■■□□□ 1.72
SCAMP2-210ENST00000569124 CFAP74Q9C0B2 1584 aa25.77■■□□□ 1.72
SCAMP2-210ENST00000569124 BCORL1Q5H9F3 1711 aa25.77■■□□□ 1.72
SCAMP2-210ENST00000569124 RICTORQ6R327 1708 aa25.74■■□□□ 1.71
SCAMP2-210ENST00000569124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.74■■□□□ 1.71
SCAMP2-210ENST00000569124 HNRNPUL2Q1KMD3 747 aaKnown RBP25.74■■□□□ 1.71
SCAMP2-210ENST00000569124 FHOD3Q2V2M9 1422 aa25.72■■□□□ 1.71
SCAMP2-210ENST00000569124 EFCAB5A4FU69 1503 aa25.71■■□□□ 1.71
SCAMP2-210ENST00000569124 ARHGEF40Q8TER5 1519 aa25.7■■□□□ 1.7
SCAMP2-210ENST00000569124 MADDQ8WXG6 1647 aa25.7■■□□□ 1.7
SCAMP2-210ENST00000569124 PTPRMP28827 1452 aa25.67■■□□□ 1.7
SCAMP2-210ENST00000569124 RAPGEF3O95398 923 aa25.66■■□□□ 1.7
SCAMP2-210ENST00000569124 RIMS1Q86UR5 1692 aaKnown RBP25.65■■□□□ 1.7
SCAMP2-210ENST00000569124 RANGAP1P46060 587 aaPredicted RBP25.65■■□□□ 1.7
SCAMP2-210ENST00000569124 TTC37Q6PGP7 1564 aa25.65■■□□□ 1.7
SCAMP2-210ENST00000569124 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.63■■□□□ 1.69
SCAMP2-210ENST00000569124 FANCAO15360 1455 aa25.6■■□□□ 1.69
SCAMP2-210ENST00000569124 DENND4BO75064 1496 aaPredicted RBP25.6■■□□□ 1.69
SCAMP2-210ENST00000569124 ZMYM4Q5VZL5 1548 aa25.58■■□□□ 1.68
SCAMP2-210ENST00000569124 PLEKHD1A6NEE1 506 aa25.57■■□□□ 1.68
SCAMP2-210ENST00000569124 MYO5CQ9NQX4 1742 aa25.57■■□□□ 1.68
SCAMP2-210ENST00000569124 ARID4BQ4LE39 1312 aaPredicted RBP25.56■■□□□ 1.68
SCAMP2-210ENST00000569124 PCF11O94913 1555 aaKnown RBP25.56■■□□□ 1.68
SCAMP2-210ENST00000569124 AKNAQ7Z591 1439 aa25.55■■□□□ 1.68
SCAMP2-210ENST00000569124 CDK13Q14004 1512 aaKnown RBP25.54■■□□□ 1.68
SCAMP2-210ENST00000569124 FER1L4A9Z1Z3 1794 aa25.54■■□□□ 1.68
SCAMP2-210ENST00000569124 HECW1Q76N89 1606 aa25.53■■□□□ 1.68
SCAMP2-210ENST00000569124 ZFYVE16Q7Z3T8 1539 aa25.53■■□□□ 1.68
SCAMP2-210ENST00000569124 SIGLEC1Q9BZZ2 1709 aa25.52■■□□□ 1.68
SCAMP2-210ENST00000569124 LMTK3Q96Q04 1460 aa25.47■■□□□ 1.67
SCAMP2-210ENST00000569124 POGZQ7Z3K3 1410 aa25.46■■□□□ 1.67
SCAMP2-210ENST00000569124 MAGI2Q86UL8 1455 aa25.44■■□□□ 1.66
SCAMP2-210ENST00000569124 LRRIQ1Q96JM4 1722 aa25.42■■□□□ 1.66
SCAMP2-210ENST00000569124 KIF14Q15058 1648 aa25.41■■□□□ 1.66
SCAMP2-210ENST00000569124 FMN1Q68DA7 1419 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms