RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 JPH4Q96JJ6 628 aa23.92■■□□□ 1.42
CNOT1-215ENST00000569020 CUL7Q14999 1698 aa23.89■■□□□ 1.41
CNOT1-215ENST00000569020 KIF27Q86VH2 1401 aa23.88■■□□□ 1.41
CNOT1-215ENST00000569020 IGF1RP08069 1367 aa23.83■■□□□ 1.41
CNOT1-215ENST00000569020 KIAA0586Q9BVV6 1533 aa23.79■■□□□ 1.4
CNOT1-215ENST00000569020 KIF13AQ9H1H9 1805 aa23.78■■□□□ 1.4
CNOT1-215ENST00000569020 NPM1P06748 294 aaKnown RBP eCLIP23.71■■□□□ 1.39
CNOT1-215ENST00000569020 CARMIL1Q5VZK9 1371 aa23.7■■□□□ 1.38
CNOT1-215ENST00000569020 ADCY10Q96PN6 1610 aa23.68■■□□□ 1.38
CNOT1-215ENST00000569020 MAPKBP1O60336 1514 aa23.65■■□□□ 1.38
CNOT1-215ENST00000569020 ABCC10Q5T3U5 1492 aa23.62■■□□□ 1.37
CNOT1-215ENST00000569020 FAM69CQ0P6D2 419 aa23.59■■□□□ 1.37
CNOT1-215ENST00000569020 IQGAP2Q13576 1575 aa23.59■■□□□ 1.37
CNOT1-215ENST00000569020 DIP2BQ9P265 1576 aa23.58■■□□□ 1.37
CNOT1-215ENST00000569020 CARMIL2Q6F5E8 1435 aa23.58■■□□□ 1.36
CNOT1-215ENST00000569020 PTPRGP23470 1445 aa23.56■■□□□ 1.36
CNOT1-215ENST00000569020 TNIKQ9UKE5 1360 aa23.52■■□□□ 1.36
CNOT1-215ENST00000569020 TTBK1Q5TCY1 1321 aaPredicted RBP23.52■■□□□ 1.36
CNOT1-215ENST00000569020 RAPGEF2Q9Y4G8 1499 aa23.51■■□□□ 1.35
CNOT1-215ENST00000569020 TSPOAP1O95153 1857 aa23.48■■□□□ 1.35
CNOT1-215ENST00000569020 ABCC2Q92887 1545 aa23.44■■□□□ 1.34
CNOT1-215ENST00000569020 DISP1Q96F81 1524 aa23.43■■□□□ 1.34
CNOT1-215ENST00000569020 UGGT2Q9NYU1 1516 aa23.42■■□□□ 1.34
CNOT1-215ENST00000569020 CTTNBP2Q8WZ74 1663 aa23.41■■□□□ 1.34
CNOT1-215ENST00000569020 KDM6BO15054 1643 aa23.41■■□□□ 1.34
CNOT1-215ENST00000569020 UHRF1BP1LA0JNW5 1464 aa23.4■■□□□ 1.34
CNOT1-215ENST00000569020 UACAQ9BZF9 1416 aa23.39■■□□□ 1.33
CNOT1-215ENST00000569020 KIAA0556O60303 1618 aa23.37■■□□□ 1.33
CNOT1-215ENST00000569020 PLB1Q6P1J6 1458 aa23.36■■□□□ 1.33
CNOT1-215ENST00000569020 ASXL2Q76L83 1435 aa23.36■■□□□ 1.33
CNOT1-215ENST00000569020 GLI2P10070 1586 aa23.32■■□□□ 1.32
CNOT1-215ENST00000569020 ZCCHC11Q5TAX3 1644 aaKnown RBP23.3■■□□□ 1.32
CNOT1-215ENST00000569020 KDM5BQ9UGL1 1544 aa23.29■■□□□ 1.32
CNOT1-215ENST00000569020 PPRC1Q5VV67 1664 aaKnown RBP23.27■■□□□ 1.32
CNOT1-215ENST00000569020 GOLGA3Q08378 1498 aa23.25■■□□□ 1.31
CNOT1-215ENST00000569020 PRXQ9BXM0 1461 aa23.24■■□□□ 1.31
CNOT1-215ENST00000569020 EPRSP07814 1512 aaKnown RBP23.22■■□□□ 1.31
CNOT1-215ENST00000569020 MAP3K4Q9Y6R4 1608 aa23.22■■□□□ 1.31
CNOT1-215ENST00000569020 ABCA8O94911 1581 aa23.14■■□□□ 1.3
CNOT1-215ENST00000569020 TEX14Q8IWB6 1497 aa23.14■■□□□ 1.29
CNOT1-215ENST00000569020 WDR7Q9Y4E6 1490 aa23.14■■□□□ 1.29
CNOT1-215ENST00000569020 FAM9AQ8IZU1 332 aaPredicted RBP23.09■■□□□ 1.29
CNOT1-215ENST00000569020 KDM4FA0A1W2PPD8 638 aa23.08■■□□□ 1.29
CNOT1-215ENST00000569020 CFAP43Q8NDM7 1665 aa23.07■■□□□ 1.28
CNOT1-215ENST00000569020 CSRNP3Q8WYN3 585 aa23.07■■□□□ 1.28
CNOT1-215ENST00000569020 COL17A1Q9UMD9 1497 aaPredicted RBP23.04■■□□□ 1.28
CNOT1-215ENST00000569020 P3H3Q8IVL6 736 aa23.01■■□□□ 1.27
CNOT1-215ENST00000569020 KCNH8Q96L42 1107 aa23.01■■□□□ 1.27
CNOT1-215ENST00000569020 EEA1Q15075 1411 aa23■■□□□ 1.27
CNOT1-215ENST00000569020 SAMD9Q5K651 1589 aa23■■□□□ 1.27
CNOT1-215ENST00000569020 CD109Q6YHK3 1445 aa22.99■■□□□ 1.27
CNOT1-215ENST00000569020 MAGI3Q5TCQ9 1506 aa22.98■■□□□ 1.27
CNOT1-215ENST00000569020 ADGRL1O94910 1474 aa22.94■■□□□ 1.26
CNOT1-215ENST00000569020 RAPGEF6Q8TEU7 1601 aa22.93■■□□□ 1.26
CNOT1-215ENST00000569020 ATP10BO94823 1461 aa22.92■■□□□ 1.26
CNOT1-215ENST00000569020 ARID3CA6NKF2 412 aa22.92■■□□□ 1.26
CNOT1-215ENST00000569020 ABCA9Q8IUA7 1624 aa22.86■■□□□ 1.25
CNOT1-215ENST00000569020 RANGAP1P46060 587 aaPredicted RBP22.85■■□□□ 1.25
CNOT1-215ENST00000569020 KIF21BO75037 1637 aa22.84■■□□□ 1.25
CNOT1-215ENST00000569020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.84■■□□□ 1.25
CNOT1-215ENST00000569020 HNRNPUL2Q1KMD3 747 aaKnown RBP22.84■■□□□ 1.25
CNOT1-215ENST00000569020 ARAP3Q8WWN8 1544 aa22.81■■□□□ 1.24
CNOT1-215ENST00000569020 FHOD3Q2V2M9 1422 aa22.81■■□□□ 1.24
CNOT1-215ENST00000569020 NUP153P49790 1475 aaKnown RBP22.79■■□□□ 1.24
CNOT1-215ENST00000569020 EFCAB5A4FU69 1503 aa22.77■■□□□ 1.24
CNOT1-215ENST00000569020 PHLDB1Q86UU1 1377 aa22.76■■□□□ 1.23
CNOT1-215ENST00000569020 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
CNOT1-215ENST00000569020 NEO1Q92859 1461 aa22.73■■□□□ 1.23
CNOT1-215ENST00000569020 PLEKHD1A6NEE1 506 aa22.7■■□□□ 1.22
CNOT1-215ENST00000569020 HECW2Q9P2P5 1572 aa22.64■■□□□ 1.22
CNOT1-215ENST00000569020 UBTFP17480 764 aaKnown RBP22.64■■□□□ 1.21
CNOT1-215ENST00000569020 RAPGEF3O95398 923 aa22.63■■□□□ 1.21
CNOT1-215ENST00000569020 CFAP74Q9C0B2 1584 aa22.63■■□□□ 1.21
CNOT1-215ENST00000569020 EHMT2Q96KQ7 1210 aa22.62■■□□□ 1.21
CNOT1-215ENST00000569020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.62■■□□□ 1.21
CNOT1-215ENST00000569020 FRMPD1Q5SYB0 1578 aa22.61■■□□□ 1.21
CNOT1-215ENST00000569020 CDK13Q14004 1512 aaKnown RBP22.58■■□□□ 1.21
CNOT1-215ENST00000569020 TTC37Q6PGP7 1564 aa22.58■■□□□ 1.2
CNOT1-215ENST00000569020 HECW1Q76N89 1606 aa22.57■■□□□ 1.2
CNOT1-215ENST00000569020 RICTORQ6R327 1708 aa22.57■■□□□ 1.2
CNOT1-215ENST00000569020 FANCAO15360 1455 aa22.57■■□□□ 1.2
CNOT1-215ENST00000569020 FMN1Q68DA7 1419 aa22.57■■□□□ 1.2
CNOT1-215ENST00000569020 ADAMTSL3P82987 1691 aa22.56■■□□□ 1.2
CNOT1-215ENST00000569020 AKNAQ7Z591 1439 aa22.56■■□□□ 1.2
CNOT1-215ENST00000569020 DENND4BO75064 1496 aaPredicted RBP22.55■■□□□ 1.2
CNOT1-215ENST00000569020 BCORL1Q5H9F3 1711 aa22.54■■□□□ 1.2
CNOT1-215ENST00000569020 ARHGAP35Q9NRY4 1499 aa22.54■■□□□ 1.2
CNOT1-215ENST00000569020 ATP1B4Q9UN42 357 aaPredicted RBP22.53■■□□□ 1.2
CNOT1-215ENST00000569020 ARID4BQ4LE39 1312 aaPredicted RBP22.51■■□□□ 1.19
CNOT1-215ENST00000569020 ARHGEF40Q8TER5 1519 aa22.51■■□□□ 1.19
CNOT1-215ENST00000569020 PTPRMP28827 1452 aa22.48■■□□□ 1.19
CNOT1-215ENST00000569020 MYO5CQ9NQX4 1742 aa22.48■■□□□ 1.19
CNOT1-215ENST00000569020 CDK11AQ9UQ88 783 aaPredicted RBP22.47■■□□□ 1.19
CNOT1-215ENST00000569020 MADDQ8WXG6 1647 aa22.46■■□□□ 1.19
CNOT1-215ENST00000569020 PLCH2O75038 1416 aa22.46■■□□□ 1.19
CNOT1-215ENST00000569020 ZMYM4Q5VZL5 1548 aa22.46■■□□□ 1.19
CNOT1-215ENST00000569020 LRRIQ1Q96JM4 1722 aa22.43■■□□□ 1.18
CNOT1-215ENST00000569020 KIF14Q15058 1648 aa22.42■■□□□ 1.18
CNOT1-215ENST00000569020 ZFYVE16Q7Z3T8 1539 aa22.42■■□□□ 1.18
CNOT1-215ENST00000569020 RIMS1Q86UR5 1692 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms