RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 ARHGAP35Q9NRY4 1499 aa19.9■□□□□ 0.78
GGA2-213ENST00000568922 CHMP7Q8WUX9 453 aaPredicted RBP19.89■□□□□ 0.77
GGA2-213ENST00000568922 EFCAB5A4FU69 1503 aa19.88■□□□□ 0.77
GGA2-213ENST00000568922 ARAP1Q96P48 1450 aa19.88■□□□□ 0.77
GGA2-213ENST00000568922 VPS8Q8N3P4 1428 aa19.88■□□□□ 0.77
GGA2-213ENST00000568922 IQGAP2Q13576 1575 aa19.87■□□□□ 0.77
GGA2-213ENST00000568922 KIAA0586Q9BVV6 1533 aa19.83■□□□□ 0.77
GGA2-213ENST00000568922 CEP170Q5SW79 1584 aa19.82■□□□□ 0.76
GGA2-213ENST00000568922 FBLN2P98095 1184 aa19.81■□□□□ 0.76
GGA2-213ENST00000568922 SAMD9Q5K651 1589 aa19.81■□□□□ 0.76
GGA2-213ENST00000568922 NUP160Q12769 1436 aa19.81■□□□□ 0.76
GGA2-213ENST00000568922 CHD1O14646 1710 aa19.81■□□□□ 0.76
GGA2-213ENST00000568922 UGGT2Q9NYU1 1516 aa19.77■□□□□ 0.76
GGA2-213ENST00000568922 FHOD3Q2V2M9 1422 aa19.72■□□□□ 0.75
GGA2-213ENST00000568922 P3H3Q8IVL6 736 aa19.71■□□□□ 0.75
GGA2-213ENST00000568922 FMN1Q68DA7 1419 aa19.68■□□□□ 0.74
GGA2-213ENST00000568922 APLP2Q06481 763 aa19.67■□□□□ 0.74
GGA2-213ENST00000568922 KIAA0556O60303 1618 aa19.66■□□□□ 0.74
GGA2-213ENST00000568922 DISP1Q96F81 1524 aa19.65■□□□□ 0.74
GGA2-213ENST00000568922 PCF11O94913 1555 aaKnown RBP19.64■□□□□ 0.73
GGA2-213ENST00000568922 FYCO1Q9BQS8 1478 aa19.62■□□□□ 0.73
GGA2-213ENST00000568922 JPH4Q96JJ6 628 aa19.62■□□□□ 0.73
GGA2-213ENST00000568922 CASKIN1Q8WXD9 1431 aa19.62■□□□□ 0.73
GGA2-213ENST00000568922 MAP3K1Q13233 1512 aa19.6■□□□□ 0.73
GGA2-213ENST00000568922 CARMIL2Q6F5E8 1435 aa19.6■□□□□ 0.73
GGA2-213ENST00000568922 PPARGC1BQ86YN6 1023 aaKnown RBP19.6■□□□□ 0.73
GGA2-213ENST00000568922 TRIM26Q12899 539 aaPredicted RBP19.59■□□□□ 0.73
GGA2-213ENST00000568922 SHROOM2Q13796 1616 aa19.58■□□□□ 0.73
GGA2-213ENST00000568922 CLASP1Q7Z460 1538 aa19.57■□□□□ 0.72
GGA2-213ENST00000568922 CFAP43Q8NDM7 1665 aa19.55■□□□□ 0.72
GGA2-213ENST00000568922 TIAM1Q13009 1591 aa19.55■□□□□ 0.72
GGA2-213ENST00000568922 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
GGA2-213ENST00000568922 HECW1Q76N89 1606 aa19.51■□□□□ 0.71
GGA2-213ENST00000568922 ATP1B4Q9UN42 357 aaPredicted RBP19.49■□□□□ 0.71
GGA2-213ENST00000568922 PCGF6Q9BYE7 350 aa19.48■□□□□ 0.71
GGA2-213ENST00000568922 LRRIQ1Q96JM4 1722 aa19.48■□□□□ 0.71
GGA2-213ENST00000568922 RAPGEF6Q8TEU7 1601 aa19.47■□□□□ 0.71
GGA2-213ENST00000568922 TTBK1Q5TCY1 1321 aaPredicted RBP19.46■□□□□ 0.71
GGA2-213ENST00000568922 CCDC18Q5T9S5 1454 aa19.46■□□□□ 0.71
GGA2-213ENST00000568922 KANK4Q5T7N3 995 aaPredicted RBP19.46■□□□□ 0.71
GGA2-213ENST00000568922 LRRC9Q6ZRR7 1453 aa19.45■□□□□ 0.7
GGA2-213ENST00000568922 OSCARQ8IYS5 282 aa19.41■□□□□ 0.7
GGA2-213ENST00000568922 EPRSP07814 1512 aaKnown RBP19.4■□□□□ 0.7
GGA2-213ENST00000568922 ABCA8O94911 1581 aa19.39■□□□□ 0.69
GGA2-213ENST00000568922 PTPRGP23470 1445 aa19.38■□□□□ 0.69
GGA2-213ENST00000568922 ERCC6L2Q5T890 1561 aa19.38■□□□□ 0.69
GGA2-213ENST00000568922 NUP153P49790 1475 aaKnown RBP19.38■□□□□ 0.69
GGA2-213ENST00000568922 PLB1Q6P1J6 1458 aa19.38■□□□□ 0.69
GGA2-213ENST00000568922 CDK13Q14004 1512 aaKnown RBP19.34■□□□□ 0.69
GGA2-213ENST00000568922 EHBP1L1Q8N3D4 1523 aa19.34■□□□□ 0.69
GGA2-213ENST00000568922 MTUS2Q5JR59 1369 aa19.33■□□□□ 0.69
GGA2-213ENST00000568922 SUPT6HQ7KZ85 1726 aaKnown RBP19.3■□□□□ 0.68
GGA2-213ENST00000568922 UACAQ9BZF9 1416 aa19.28■□□□□ 0.68
GGA2-213ENST00000568922 MAGI3Q5TCQ9 1506 aa19.28■□□□□ 0.68
GGA2-213ENST00000568922 RRBP1Q9P2E9 1410 aaKnown RBP19.26■□□□□ 0.67
GGA2-213ENST00000568922 CDK11AQ9UQ88 783 aaPredicted RBP19.25■□□□□ 0.67
GGA2-213ENST00000568922 ABCC2Q92887 1545 aa19.25■□□□□ 0.67
GGA2-213ENST00000568922 ARID3CA6NKF2 412 aa19.24■□□□□ 0.67
GGA2-213ENST00000568922 ATP10BO94823 1461 aa19.23■□□□□ 0.67
GGA2-213ENST00000568922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.23■□□□□ 0.67
GGA2-213ENST00000568922 HNRNPUL2Q1KMD3 747 aaKnown RBP19.23■□□□□ 0.67
GGA2-213ENST00000568922 NCOA2Q15596 1464 aa19.22■□□□□ 0.67
GGA2-213ENST00000568922 PHLDB1Q86UU1 1377 aa19.22■□□□□ 0.67
GGA2-213ENST00000568922 ARHGEF11O15085 1522 aa19.22■□□□□ 0.67
GGA2-213ENST00000568922 UHRF1BP1LA0JNW5 1464 aa19.22■□□□□ 0.67
GGA2-213ENST00000568922 CCNB3Q8WWL7 1395 aa19.19■□□□□ 0.66
GGA2-213ENST00000568922 TROQ12816 1431 aaPredicted RBP19.19■□□□□ 0.66
GGA2-213ENST00000568922 ADCY10Q96PN6 1610 aa19.17■□□□□ 0.66
GGA2-213ENST00000568922 MYOM3Q5VTT5 1437 aa19.15■□□□□ 0.66
GGA2-213ENST00000568922 PLEKHD1A6NEE1 506 aa19.14■□□□□ 0.65
GGA2-213ENST00000568922 FGD6Q6ZV73 1430 aa19.13■□□□□ 0.65
GGA2-213ENST00000568922 ZCCHC11Q5TAX3 1644 aaKnown RBP19.13■□□□□ 0.65
GGA2-213ENST00000568922 KDM5BQ9UGL1 1544 aa19.12■□□□□ 0.65
GGA2-213ENST00000568922 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.12■□□□□ 0.65
GGA2-213ENST00000568922 KIF14Q15058 1648 aa19.11■□□□□ 0.65
GGA2-213ENST00000568922 ITSN2Q9NZM3 1697 aa19.08■□□□□ 0.64
GGA2-213ENST00000568922 MIA2Q96PC5 1412 aa19.07■□□□□ 0.64
GGA2-213ENST00000568922 PTPN23Q9H3S7 1636 aa19.06■□□□□ 0.64
GGA2-213ENST00000568922 FAM50AQ14320 339 aaKnown RBP19.04■□□□□ 0.64
GGA2-213ENST00000568922 TCOF1Q13428 1488 aaKnown RBP19.03■□□□□ 0.64
GGA2-213ENST00000568922 ABCC10Q5T3U5 1492 aa19.03■□□□□ 0.64
GGA2-213ENST00000568922 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
GGA2-213ENST00000568922 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
GGA2-213ENST00000568922 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
GGA2-213ENST00000568922 CDC42BPAQ5VT25 1732 aa19.01■□□□□ 0.63
GGA2-213ENST00000568922 GPATCH8Q9UKJ3 1502 aaKnown RBP19■□□□□ 0.63
GGA2-213ENST00000568922 ITGAEP38570 1179 aa18.96■□□□□ 0.63
GGA2-213ENST00000568922 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.95■□□□□ 0.62
GGA2-213ENST00000568922 NPM1P06748 294 aaKnown RBP eCLIP18.95■□□□□ 0.62
GGA2-213ENST00000568922 WDR7Q9Y4E6 1490 aa18.94■□□□□ 0.62
GGA2-213ENST00000568922 PREX2Q70Z35 1606 aa18.94■□□□□ 0.62
GGA2-213ENST00000568922 TTC37Q6PGP7 1564 aa18.93■□□□□ 0.62
GGA2-213ENST00000568922 CFDP1Q9UEE9 299 aaPredicted RBP18.93■□□□□ 0.62
GGA2-213ENST00000568922 MYO5CQ9NQX4 1742 aa18.93■□□□□ 0.62
GGA2-213ENST00000568922 CDC42BPBQ9Y5S2 1711 aa18.92■□□□□ 0.62
GGA2-213ENST00000568922 ASXL2Q76L83 1435 aa18.9■□□□□ 0.62
GGA2-213ENST00000568922 CAMSAP2Q08AD1 1489 aa18.9■□□□□ 0.62
GGA2-213ENST00000568922 DNMT1P26358 1616 aaKnown RBP18.89■□□□□ 0.62
GGA2-213ENST00000568922 KCNH8Q96L42 1107 aa18.89■□□□□ 0.61
GGA2-213ENST00000568922 CYB5RLQ6IPT4 315 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms