RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
HERPUD1-216ENST00000568814 GOLGA3Q08378 1498 aa16.73■□□□□ 0.27
HERPUD1-216ENST00000568814 NUP160Q12769 1436 aa16.73■□□□□ 0.27
HERPUD1-216ENST00000568814 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
HERPUD1-216ENST00000568814 CEP170Q5SW79 1584 aa16.7■□□□□ 0.26
HERPUD1-216ENST00000568814 KIAA0586Q9BVV6 1533 aa16.66■□□□□ 0.26
HERPUD1-216ENST00000568814 CTTNBP2Q8WZ74 1663 aa16.66■□□□□ 0.26
HERPUD1-216ENST00000568814 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
HERPUD1-216ENST00000568814 CYB5RLQ6IPT4 315 aa16.63■□□□□ 0.25
HERPUD1-216ENST00000568814 IQGAP2Q13576 1575 aa16.63■□□□□ 0.25
HERPUD1-216ENST00000568814 UBTFP17480 764 aaKnown RBP16.61■□□□□ 0.25
HERPUD1-216ENST00000568814 TNIKQ9UKE5 1360 aa16.57■□□□□ 0.24
HERPUD1-216ENST00000568814 EHMT2Q96KQ7 1210 aa16.57■□□□□ 0.24
HERPUD1-216ENST00000568814 SHROOM2Q13796 1616 aa16.56■□□□□ 0.24
HERPUD1-216ENST00000568814 ARAP1Q96P48 1450 aa16.55■□□□□ 0.24
HERPUD1-216ENST00000568814 UGGT2Q9NYU1 1516 aa16.55■□□□□ 0.24
HERPUD1-216ENST00000568814 JPH4Q96JJ6 628 aa16.52■□□□□ 0.24
HERPUD1-216ENST00000568814 LOC105371045A0A1W2PR82 267 aa16.51■□□□□ 0.23
HERPUD1-216ENST00000568814 CARMIL2Q6F5E8 1435 aa16.49■□□□□ 0.23
HERPUD1-216ENST00000568814 EFCAB5A4FU69 1503 aa16.49■□□□□ 0.23
HERPUD1-216ENST00000568814 PRG4Q92954 1404 aaPredicted RBP16.48■□□□□ 0.23
HERPUD1-216ENST00000568814 SAMD9Q5K651 1589 aa16.46■□□□□ 0.23
HERPUD1-216ENST00000568814 KIAA0556O60303 1618 aa16.45■□□□□ 0.22
HERPUD1-216ENST00000568814 DISP1Q96F81 1524 aa16.45■□□□□ 0.22
HERPUD1-216ENST00000568814 CLIP1P30622 1438 aa16.43■□□□□ 0.22
HERPUD1-216ENST00000568814 CEP162Q5TB80 1403 aa16.43■□□□□ 0.22
HERPUD1-216ENST00000568814 RANGAP1P46060 587 aaPredicted RBP16.4■□□□□ 0.22
HERPUD1-216ENST00000568814 ERCC6L2Q5T890 1561 aa16.39■□□□□ 0.21
HERPUD1-216ENST00000568814 ARHGAP35Q9NRY4 1499 aa16.39■□□□□ 0.21
HERPUD1-216ENST00000568814 FHOD3Q2V2M9 1422 aa16.35■□□□□ 0.21
HERPUD1-216ENST00000568814 PTPRGP23470 1445 aa16.34■□□□□ 0.21
HERPUD1-216ENST00000568814 FMN1Q68DA7 1419 aa16.32■□□□□ 0.2
HERPUD1-216ENST00000568814 P3H3Q8IVL6 736 aa16.32■□□□□ 0.2
HERPUD1-216ENST00000568814 UACAQ9BZF9 1416 aa16.25■□□□□ 0.19
HERPUD1-216ENST00000568814 TTBK1Q5TCY1 1321 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-216ENST00000568814 ABCA8O94911 1581 aa16.24■□□□□ 0.19
HERPUD1-216ENST00000568814 RAPGEF6Q8TEU7 1601 aa16.23■□□□□ 0.19
HERPUD1-216ENST00000568814 UHRF1BP1LA0JNW5 1464 aa16.23■□□□□ 0.19
HERPUD1-216ENST00000568814 ABCC2Q92887 1545 aa16.23■□□□□ 0.19
HERPUD1-216ENST00000568814 PLB1Q6P1J6 1458 aa16.22■□□□□ 0.19
HERPUD1-216ENST00000568814 VPS8Q8N3P4 1428 aa16.22■□□□□ 0.19
HERPUD1-216ENST00000568814 ILDR1Q86SU0 546 aaPredicted RBP16.22■□□□□ 0.19
HERPUD1-216ENST00000568814 HECW1Q76N89 1606 aa16.21■□□□□ 0.19
HERPUD1-216ENST00000568814 FYCO1Q9BQS8 1478 aa16.21■□□□□ 0.19
HERPUD1-216ENST00000568814 CASKIN1Q8WXD9 1431 aa16.2■□□□□ 0.18
HERPUD1-216ENST00000568814 PCF11O94913 1555 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-216ENST00000568814 ADCY10Q96PN6 1610 aa16.19■□□□□ 0.18
HERPUD1-216ENST00000568814 NUP153P49790 1475 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-216ENST00000568814 KDM5BQ9UGL1 1544 aa16.14■□□□□ 0.18
HERPUD1-216ENST00000568814 CCDC18Q5T9S5 1454 aa16.14■□□□□ 0.17
HERPUD1-216ENST00000568814 EPRSP07814 1512 aaKnown RBP16.11■□□□□ 0.17
HERPUD1-216ENST00000568814 NPM1P06748 294 aaKnown RBP eCLIP16.11■□□□□ 0.17
HERPUD1-216ENST00000568814 ATP1B4Q9UN42 357 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-216ENST00000568814 ZCCHC11Q5TAX3 1644 aaKnown RBP16.1■□□□□ 0.17
HERPUD1-216ENST00000568814 ATP10BO94823 1461 aa16.09■□□□□ 0.17
HERPUD1-216ENST00000568814 MAP3K1Q13233 1512 aa16.07■□□□□ 0.16
HERPUD1-216ENST00000568814 CDK13Q14004 1512 aaKnown RBP16.07■□□□□ 0.16
HERPUD1-216ENST00000568814 LRRIQ1Q96JM4 1722 aa16.06■□□□□ 0.16
HERPUD1-216ENST00000568814 CFAP43Q8NDM7 1665 aa16.05■□□□□ 0.16
HERPUD1-216ENST00000568814 MAPKBP1O60336 1514 aa16.05■□□□□ 0.16
HERPUD1-216ENST00000568814 APLP2Q06481 763 aa16.05■□□□□ 0.16
HERPUD1-216ENST00000568814 CDK11AQ9UQ88 783 aaPredicted RBP16.05■□□□□ 0.16
HERPUD1-216ENST00000568814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
HERPUD1-216ENST00000568814 HNRNPUL2Q1KMD3 747 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-216ENST00000568814 TIAM1Q13009 1591 aa16.04■□□□□ 0.16
HERPUD1-216ENST00000568814 ARID3CA6NKF2 412 aa16.03■□□□□ 0.16
HERPUD1-216ENST00000568814 WDR7Q9Y4E6 1490 aa16.01■□□□□ 0.15
HERPUD1-216ENST00000568814 ASXL2Q76L83 1435 aa16.01■□□□□ 0.15
HERPUD1-216ENST00000568814 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
HERPUD1-216ENST00000568814 KIF13AQ9H1H9 1805 aa15.98■□□□□ 0.15
HERPUD1-216ENST00000568814 TROQ12816 1431 aaPredicted RBP15.98■□□□□ 0.15
HERPUD1-216ENST00000568814 EHBP1L1Q8N3D4 1523 aa15.98■□□□□ 0.15
HERPUD1-216ENST00000568814 MTUS2Q5JR59 1369 aa15.97■□□□□ 0.15
HERPUD1-216ENST00000568814 LRRC9Q6ZRR7 1453 aa15.95■□□□□ 0.14
HERPUD1-216ENST00000568814 MAGI3Q5TCQ9 1506 aa15.94■□□□□ 0.14
HERPUD1-216ENST00000568814 KIF14Q15058 1648 aa15.94■□□□□ 0.14
HERPUD1-216ENST00000568814 ABCC10Q5T3U5 1492 aa15.91■□□□□ 0.14
HERPUD1-216ENST00000568814 GLI2P10070 1586 aa15.9■□□□□ 0.14
HERPUD1-216ENST00000568814 DIP2BQ9P265 1576 aa15.9■□□□□ 0.14
HERPUD1-216ENST00000568814 SUPT6HQ7KZ85 1726 aaKnown RBP15.9■□□□□ 0.14
HERPUD1-216ENST00000568814 KDM4FA0A1W2PPD8 638 aa15.89■□□□□ 0.13
HERPUD1-216ENST00000568814 KANK4Q5T7N3 995 aaPredicted RBP15.88■□□□□ 0.13
HERPUD1-216ENST00000568814 KCNH8Q96L42 1107 aa15.88■□□□□ 0.13
HERPUD1-216ENST00000568814 ABCA9Q8IUA7 1624 aa15.87■□□□□ 0.13
HERPUD1-216ENST00000568814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.86■□□□□ 0.13
HERPUD1-216ENST00000568814 NCOA2Q15596 1464 aa15.84■□□□□ 0.13
HERPUD1-216ENST00000568814 TTC37Q6PGP7 1564 aa15.84■□□□□ 0.13
HERPUD1-216ENST00000568814 FAM69CQ0P6D2 419 aa15.83■□□□□ 0.12
HERPUD1-216ENST00000568814 MAP3K4Q9Y6R4 1608 aa15.83■□□□□ 0.12
HERPUD1-216ENST00000568814 CCNB3Q8WWL7 1395 aa15.82■□□□□ 0.12
HERPUD1-216ENST00000568814 ARAP3Q8WWN8 1544 aa15.81■□□□□ 0.12
HERPUD1-216ENST00000568814 MYO5CQ9NQX4 1742 aa15.81■□□□□ 0.12
HERPUD1-216ENST00000568814 ITSN2Q9NZM3 1697 aa15.81■□□□□ 0.12
HERPUD1-216ENST00000568814 CD109Q6YHK3 1445 aa15.8■□□□□ 0.12
HERPUD1-216ENST00000568814 PREX2Q70Z35 1606 aa15.79■□□□□ 0.12
HERPUD1-216ENST00000568814 PLCH2O75038 1416 aa15.77■□□□□ 0.12
HERPUD1-216ENST00000568814 MYOM3Q5VTT5 1437 aa15.77■□□□□ 0.12
HERPUD1-216ENST00000568814 CDC42BPAQ5VT25 1732 aa15.77■□□□□ 0.12
HERPUD1-216ENST00000568814 GPATCH8Q9UKJ3 1502 aaKnown RBP15.77■□□□□ 0.11
HERPUD1-216ENST00000568814 KDM6BO15054 1643 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms