RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 JPH4Q96JJ6 628 aa21.87■■□□□ 1.09
VPS9D1-207ENST00000568691 WRNQ14191 1432 aaPredicted RBP eCLIP21.85■■□□□ 1.09
VPS9D1-207ENST00000568691 KDM6BO15054 1643 aa21.84■■□□□ 1.09
VPS9D1-207ENST00000568691 ADCY10Q96PN6 1610 aa21.82■■□□□ 1.08
VPS9D1-207ENST00000568691 ERICH3Q5RHP9 1530 aa21.8■■□□□ 1.08
VPS9D1-207ENST00000568691 RUSC2Q8N2Y8 1516 aa21.75■■□□□ 1.07
VPS9D1-207ENST00000568691 NPM1P06748 294 aaKnown RBP eCLIP21.73■■□□□ 1.07
VPS9D1-207ENST00000568691 TOP2BQ02880 1626 aa21.72■■□□□ 1.07
VPS9D1-207ENST00000568691 BIVM-ERCC5R4GMW8 1640 aa21.72■■□□□ 1.07
VPS9D1-207ENST00000568691 TSPOAP1O95153 1857 aa21.7■■□□□ 1.06
VPS9D1-207ENST00000568691 ADGRL1O94910 1474 aa21.67■■□□□ 1.06
VPS9D1-207ENST00000568691 PPRC1Q5VV67 1664 aaKnown RBP21.61■■□□□ 1.05
VPS9D1-207ENST00000568691 COL17A1Q9UMD9 1497 aaPredicted RBP21.61■■□□□ 1.05
VPS9D1-207ENST00000568691 HECW2Q9P2P5 1572 aa21.61■■□□□ 1.05
VPS9D1-207ENST00000568691 KIAA0586Q9BVV6 1533 aa21.55■■□□□ 1.04
VPS9D1-207ENST00000568691 GLI2P10070 1586 aa21.5■■□□□ 1.03
VPS9D1-207ENST00000568691 ASXL2Q76L83 1435 aa21.5■■□□□ 1.03
VPS9D1-207ENST00000568691 PTPRGP23470 1445 aa21.48■■□□□ 1.03
VPS9D1-207ENST00000568691 ABCC2Q92887 1545 aa21.48■■□□□ 1.03
VPS9D1-207ENST00000568691 IGF1RP08069 1367 aa21.45■■□□□ 1.02
VPS9D1-207ENST00000568691 PLB1Q6P1J6 1458 aa21.43■■□□□ 1.02
VPS9D1-207ENST00000568691 TTBK1Q5TCY1 1321 aaPredicted RBP21.4■■□□□ 1.02
VPS9D1-207ENST00000568691 TNIKQ9UKE5 1360 aa21.37■■□□□ 1.01
VPS9D1-207ENST00000568691 EPRSP07814 1512 aaKnown RBP21.37■■□□□ 1.01
VPS9D1-207ENST00000568691 UHRF1BP1LA0JNW5 1464 aa21.37■■□□□ 1.01
VPS9D1-207ENST00000568691 MAP3K4Q9Y6R4 1608 aa21.36■■□□□ 1.01
VPS9D1-207ENST00000568691 SUPT5HO00267 1087 aaKnown RBP21.35■■□□□ 1.01
VPS9D1-207ENST00000568691 FBXO41Q8TF61 875 aa21.35■■□□□ 1.01
VPS9D1-207ENST00000568691 CUL7Q14999 1698 aa21.34■■□□□ 1.01
VPS9D1-207ENST00000568691 UACAQ9BZF9 1416 aa21.3■■□□□ 1
VPS9D1-207ENST00000568691 KDM5BQ9UGL1 1544 aa21.29■■□□□ 1
VPS9D1-207ENST00000568691 DISP1Q96F81 1524 aa21.27■■□□□ 1
VPS9D1-207ENST00000568691 CARMIL2Q6F5E8 1435 aa21.26■□□□□ 0.99
VPS9D1-207ENST00000568691 TEX14Q8IWB6 1497 aa21.26■□□□□ 0.99
VPS9D1-207ENST00000568691 KIF27Q86VH2 1401 aa21.23■□□□□ 0.99
VPS9D1-207ENST00000568691 CARMIL1Q5VZK9 1371 aa21.22■□□□□ 0.99
VPS9D1-207ENST00000568691 ZCCHC11Q5TAX3 1644 aaKnown RBP21.2■□□□□ 0.98
VPS9D1-207ENST00000568691 IQGAP2Q13576 1575 aa21.19■□□□□ 0.98
VPS9D1-207ENST00000568691 WDR7Q9Y4E6 1490 aa21.13■□□□□ 0.97
VPS9D1-207ENST00000568691 MAGI3Q5TCQ9 1506 aa21.12■□□□□ 0.97
VPS9D1-207ENST00000568691 KIF21BO75037 1637 aa21.11■□□□□ 0.97
VPS9D1-207ENST00000568691 UGGT2Q9NYU1 1516 aa21.09■□□□□ 0.97
VPS9D1-207ENST00000568691 CD109Q6YHK3 1445 aa21.08■□□□□ 0.97
VPS9D1-207ENST00000568691 PTPRMP28827 1452 aa21.06■□□□□ 0.96
VPS9D1-207ENST00000568691 KIAA0556O60303 1618 aa21.05■□□□□ 0.96
VPS9D1-207ENST00000568691 ADAMTSL3P82987 1691 aa21.02■□□□□ 0.96
VPS9D1-207ENST00000568691 CFAP43Q8NDM7 1665 aa21.01■□□□□ 0.95
VPS9D1-207ENST00000568691 KCNH8Q96L42 1107 aa20.99■□□□□ 0.95
VPS9D1-207ENST00000568691 LMTK3Q96Q04 1460 aa20.98■□□□□ 0.95
VPS9D1-207ENST00000568691 ARAP3Q8WWN8 1544 aa20.98■□□□□ 0.95
VPS9D1-207ENST00000568691 ABCA8O94911 1581 aa20.95■□□□□ 0.94
VPS9D1-207ENST00000568691 PCF11O94913 1555 aaKnown RBP20.94■□□□□ 0.94
VPS9D1-207ENST00000568691 ILDR2Q71H61 639 aa20.92■□□□□ 0.94
VPS9D1-207ENST00000568691 RAPGEF2Q9Y4G8 1499 aa20.91■□□□□ 0.94
VPS9D1-207ENST00000568691 MADDQ8WXG6 1647 aa20.87■□□□□ 0.93
VPS9D1-207ENST00000568691 RAPGEF3O95398 923 aa20.87■□□□□ 0.93
VPS9D1-207ENST00000568691 BCORL1Q5H9F3 1711 aa20.86■□□□□ 0.93
VPS9D1-207ENST00000568691 HSPA2P54652 639 aa20.84■□□□□ 0.93
VPS9D1-207ENST00000568691 FRMPD1Q5SYB0 1578 aa20.83■□□□□ 0.92
VPS9D1-207ENST00000568691 CERKQ8TCT0 537 aa20.8■□□□□ 0.92
VPS9D1-207ENST00000568691 ATP10BO94823 1461 aa20.79■□□□□ 0.92
VPS9D1-207ENST00000568691 ARID3CA6NKF2 412 aa20.78■□□□□ 0.92
VPS9D1-207ENST00000568691 SOCS7O14512 581 aa20.78■□□□□ 0.92
VPS9D1-207ENST00000568691 ABCA9Q8IUA7 1624 aa20.77■□□□□ 0.92
VPS9D1-207ENST00000568691 PHLDB1Q86UU1 1377 aa20.76■□□□□ 0.91
VPS9D1-207ENST00000568691 GOLGA3Q08378 1498 aa20.75■□□□□ 0.91
VPS9D1-207ENST00000568691 RIMS1Q86UR5 1692 aaKnown RBP20.73■□□□□ 0.91
VPS9D1-207ENST00000568691 NEO1Q92859 1461 aa20.72■□□□□ 0.91
VPS9D1-207ENST00000568691 ARID4BQ4LE39 1312 aaPredicted RBP20.72■□□□□ 0.91
VPS9D1-207ENST00000568691 DISP3Q9P2K9 1392 aa20.72■□□□□ 0.91
VPS9D1-207ENST00000568691 CTTNBP2Q8WZ74 1663 aa20.71■□□□□ 0.91
VPS9D1-207ENST00000568691 SIGLEC1Q9BZZ2 1709 aa20.69■□□□□ 0.9
VPS9D1-207ENST00000568691 ARHGEF40Q8TER5 1519 aa20.68■□□□□ 0.9
VPS9D1-207ENST00000568691 PLPPR3Q6T4P5 718 aa20.63■□□□□ 0.89
VPS9D1-207ENST00000568691 P3H3Q8IVL6 736 aa20.61■□□□□ 0.89
VPS9D1-207ENST00000568691 RICTORQ6R327 1708 aa20.6■□□□□ 0.89
VPS9D1-207ENST00000568691 FHOD3Q2V2M9 1422 aa20.6■□□□□ 0.89
VPS9D1-207ENST00000568691 PRXQ9BXM0 1461 aa20.59■□□□□ 0.89
VPS9D1-207ENST00000568691 YEATS2Q9ULM3 1422 aa20.59■□□□□ 0.89
VPS9D1-207ENST00000568691 DENND4BO75064 1496 aaPredicted RBP20.57■□□□□ 0.88
VPS9D1-207ENST00000568691 AKNAQ7Z591 1439 aa20.54■□□□□ 0.88
VPS9D1-207ENST00000568691 ZMYM4Q5VZL5 1548 aa20.53■□□□□ 0.88
VPS9D1-207ENST00000568691 TTC37Q6PGP7 1564 aa20.52■□□□□ 0.88
VPS9D1-207ENST00000568691 SPATA31D1Q6ZQQ2 1576 aa20.52■□□□□ 0.88
VPS9D1-207ENST00000568691 FANCAO15360 1455 aa20.52■□□□□ 0.88
VPS9D1-207ENST00000568691 NUP153P49790 1475 aaKnown RBP20.52■□□□□ 0.88
VPS9D1-207ENST00000568691 RAPGEF6Q8TEU7 1601 aa20.5■□□□□ 0.87
VPS9D1-207ENST00000568691 STRCQ7RTU9 1775 aa20.5■□□□□ 0.87
VPS9D1-207ENST00000568691 MLECQ14165 292 aa20.5■□□□□ 0.87
VPS9D1-207ENST00000568691 POGZQ7Z3K3 1410 aa20.49■□□□□ 0.87
VPS9D1-207ENST00000568691 ZFYVE16Q7Z3T8 1539 aa20.48■□□□□ 0.87
VPS9D1-207ENST00000568691 SAMD9Q5K651 1589 aa20.48■□□□□ 0.87
VPS9D1-207ENST00000568691 ARHGEF12Q9NZN5 1544 aa20.47■□□□□ 0.87
VPS9D1-207ENST00000568691 CEBPAP49715 358 aaPredicted RBP20.46■□□□□ 0.87
VPS9D1-207ENST00000568691 FER1L4A9Z1Z3 1794 aa20.45■□□□□ 0.86
VPS9D1-207ENST00000568691 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.44■□□□□ 0.86
VPS9D1-207ENST00000568691 HECW1Q76N89 1606 aa20.44■□□□□ 0.86
VPS9D1-207ENST00000568691 EFCAB5A4FU69 1503 aa20.43■□□□□ 0.86
VPS9D1-207ENST00000568691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.43■□□□□ 0.86
VPS9D1-207ENST00000568691 HNRNPUL2Q1KMD3 747 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms