RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 RUSC2Q8N2Y8 1516 aa32.92■■■□□ 2.86
SPSB3-210ENST00000568416 CUL7Q14999 1698 aa32.86■■■□□ 2.85
SPSB3-210ENST00000568416 KIAA0586Q9BVV6 1533 aa32.79■■■□□ 2.84
SPSB3-210ENST00000568416 CARMIL1Q5VZK9 1371 aa32.74■■■□□ 2.83
SPSB3-210ENST00000568416 ADCY10Q96PN6 1610 aa32.5■■■□□ 2.79
SPSB3-210ENST00000568416 NPM1P06748 294 aaKnown RBP eCLIP32.47■■■□□ 2.79
SPSB3-210ENST00000568416 IQGAP2Q13576 1575 aa32.47■■■□□ 2.79
SPSB3-210ENST00000568416 RAPGEF2Q9Y4G8 1499 aa32.47■■■□□ 2.79
SPSB3-210ENST00000568416 MAPKBP1O60336 1514 aa32.45■■■□□ 2.78
SPSB3-210ENST00000568416 CARMIL2Q6F5E8 1435 aa32.43■■■□□ 2.78
SPSB3-210ENST00000568416 PTPRGP23470 1445 aa32.43■■■□□ 2.78
SPSB3-210ENST00000568416 KIF13AQ9H1H9 1805 aa32.42■■■□□ 2.78
SPSB3-210ENST00000568416 TNIKQ9UKE5 1360 aa32.4■■■□□ 2.78
SPSB3-210ENST00000568416 ABCC10Q5T3U5 1492 aa32.4■■■□□ 2.78
SPSB3-210ENST00000568416 DISP1Q96F81 1524 aa32.34■■■□□ 2.77
SPSB3-210ENST00000568416 FAM69CQ0P6D2 419 aa32.33■■■□□ 2.77
SPSB3-210ENST00000568416 DIP2BQ9P265 1576 aa32.31■■■□□ 2.76
SPSB3-210ENST00000568416 UGGT2Q9NYU1 1516 aa32.31■■■□□ 2.76
SPSB3-210ENST00000568416 TTBK1Q5TCY1 1321 aaPredicted RBP32.3■■■□□ 2.76
SPSB3-210ENST00000568416 ABCC2Q92887 1545 aa32.24■■■□□ 2.75
SPSB3-210ENST00000568416 UHRF1BP1LA0JNW5 1464 aa32.23■■■□□ 2.75
SPSB3-210ENST00000568416 PRXQ9BXM0 1461 aa32.22■■■□□ 2.75
SPSB3-210ENST00000568416 UACAQ9BZF9 1416 aa32.2■■■□□ 2.75
SPSB3-210ENST00000568416 KIAA0556O60303 1618 aa32.18■■■□□ 2.74
SPSB3-210ENST00000568416 CTTNBP2Q8WZ74 1663 aa32.13■■■□□ 2.73
SPSB3-210ENST00000568416 ASXL2Q76L83 1435 aa32.1■■■□□ 2.73
SPSB3-210ENST00000568416 PLB1Q6P1J6 1458 aa32.09■■■□□ 2.73
SPSB3-210ENST00000568416 KDM5BQ9UGL1 1544 aa32.07■■■□□ 2.72
SPSB3-210ENST00000568416 GOLGA3Q08378 1498 aa32.04■■■□□ 2.72
SPSB3-210ENST00000568416 GLI2P10070 1586 aa32.01■■■□□ 2.71
SPSB3-210ENST00000568416 AEBP2Q6ZN18 517 aaPredicted RBP31.99■■■□□ 2.71
SPSB3-210ENST00000568416 CSRNP3Q8WYN3 585 aa31.99■■■□□ 2.71
SPSB3-210ENST00000568416 ZCCHC11Q5TAX3 1644 aaKnown RBP31.96■■■□□ 2.71
SPSB3-210ENST00000568416 KDM6BO15054 1643 aa31.95■■■□□ 2.71
SPSB3-210ENST00000568416 TSPOAP1O95153 1857 aa31.95■■■□□ 2.7
SPSB3-210ENST00000568416 EPRSP07814 1512 aaKnown RBP31.92■■■□□ 2.7
SPSB3-210ENST00000568416 EEA1Q15075 1411 aa31.9■■■□□ 2.7
SPSB3-210ENST00000568416 ABCA8O94911 1581 aa31.9■■■□□ 2.7
SPSB3-210ENST00000568416 PPRC1Q5VV67 1664 aaKnown RBP31.87■■■□□ 2.69
SPSB3-210ENST00000568416 WDR7Q9Y4E6 1490 aa31.83■■■□□ 2.69
SPSB3-210ENST00000568416 MAP3K4Q9Y6R4 1608 aa31.81■■■□□ 2.68
SPSB3-210ENST00000568416 P3H3Q8IVL6 736 aa31.76■■■□□ 2.67
SPSB3-210ENST00000568416 SAMD9Q5K651 1589 aa31.75■■■□□ 2.67
SPSB3-210ENST00000568416 TEX14Q8IWB6 1497 aa31.72■■■□□ 2.67
SPSB3-210ENST00000568416 FAM9AQ8IZU1 332 aaPredicted RBP31.69■■■□□ 2.66
SPSB3-210ENST00000568416 COL17A1Q9UMD9 1497 aaPredicted RBP31.68■■■□□ 2.66
SPSB3-210ENST00000568416 ATP10BO94823 1461 aa31.64■■■□□ 2.66
SPSB3-210ENST00000568416 KCNH8Q96L42 1107 aa31.63■■■□□ 2.65
SPSB3-210ENST00000568416 KIF21BO75037 1637 aa31.61■■■□□ 2.65
SPSB3-210ENST00000568416 CD109Q6YHK3 1445 aa31.6■■■□□ 2.65
SPSB3-210ENST00000568416 MAGI3Q5TCQ9 1506 aa31.59■■■□□ 2.65
SPSB3-210ENST00000568416 CFAP43Q8NDM7 1665 aa31.59■■■□□ 2.65
SPSB3-210ENST00000568416 KDM4FA0A1W2PPD8 638 aa31.58■■■□□ 2.65
SPSB3-210ENST00000568416 ARID3CA6NKF2 412 aa31.58■■■□□ 2.65
SPSB3-210ENST00000568416 CHIC1Q5VXU3 224 aa31.57■■■□□ 2.64
SPSB3-210ENST00000568416 RAPGEF6Q8TEU7 1601 aa31.56■■■□□ 2.64
SPSB3-210ENST00000568416 RANGAP1P46060 587 aaPredicted RBP31.54■■■□□ 2.64
SPSB3-210ENST00000568416 FHOD3Q2V2M9 1422 aa31.53■■■□□ 2.64
SPSB3-210ENST00000568416 NUP153P49790 1475 aaKnown RBP31.47■■■□□ 2.63
SPSB3-210ENST00000568416 EFCAB5A4FU69 1503 aa31.46■■■□□ 2.63
SPSB3-210ENST00000568416 ABCA9Q8IUA7 1624 aa31.41■■■□□ 2.62
SPSB3-210ENST00000568416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.39■■■□□ 2.62
SPSB3-210ENST00000568416 HNRNPUL2Q1KMD3 747 aaKnown RBP31.39■■■□□ 2.62
SPSB3-210ENST00000568416 ADGRL1O94910 1474 aa31.36■■■□□ 2.61
SPSB3-210ENST00000568416 ARAP3Q8WWN8 1544 aa31.34■■■□□ 2.61
SPSB3-210ENST00000568416 UBTFP17480 764 aaKnown RBP31.33■■■□□ 2.61
SPSB3-210ENST00000568416 EHMT2Q96KQ7 1210 aa31.32■■■□□ 2.6
SPSB3-210ENST00000568416 PHLDB1Q86UU1 1377 aa31.3■■■□□ 2.6
SPSB3-210ENST00000568416 PLEKHD1A6NEE1 506 aa31.27■■■□□ 2.6
SPSB3-210ENST00000568416 NEO1Q92859 1461 aa31.25■■■□□ 2.59
SPSB3-210ENST00000568416 ARHGAP35Q9NRY4 1499 aa31.23■■■□□ 2.59
SPSB3-210ENST00000568416 FMN1Q68DA7 1419 aa31.18■■■□□ 2.58
SPSB3-210ENST00000568416 CDK13Q14004 1512 aaKnown RBP31.17■■■□□ 2.58
SPSB3-210ENST00000568416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.15■■■□□ 2.58
SPSB3-210ENST00000568416 RAPGEF3O95398 923 aa31.13■■■□□ 2.57
SPSB3-210ENST00000568416 HECW1Q76N89 1606 aa31.1■■■□□ 2.57
SPSB3-210ENST00000568416 FRMPD1Q5SYB0 1578 aa31.09■■■□□ 2.57
SPSB3-210ENST00000568416 TTC37Q6PGP7 1564 aa31.09■■■□□ 2.57
SPSB3-210ENST00000568416 ATP1B4Q9UN42 357 aaPredicted RBP31.05■■■□□ 2.56
SPSB3-210ENST00000568416 FANCAO15360 1455 aa31.05■■■□□ 2.56
SPSB3-210ENST00000568416 AKNAQ7Z591 1439 aa31.05■■■□□ 2.56
SPSB3-210ENST00000568416 DENND4BO75064 1496 aaPredicted RBP31.01■■■□□ 2.56
SPSB3-210ENST00000568416 CFAP74Q9C0B2 1584 aa31.01■■■□□ 2.56
SPSB3-210ENST00000568416 CDK11AQ9UQ88 783 aaPredicted RBP30.97■■■□□ 2.55
SPSB3-210ENST00000568416 PLCH2O75038 1416 aa30.97■■■□□ 2.55
SPSB3-210ENST00000568416 RICTORQ6R327 1708 aa30.94■■■□□ 2.54
SPSB3-210ENST00000568416 TROQ12816 1431 aaPredicted RBP30.91■■■□□ 2.54
SPSB3-210ENST00000568416 ARHGEF40Q8TER5 1519 aa30.9■■■□□ 2.54
SPSB3-210ENST00000568416 CASKIN1Q8WXD9 1431 aa30.88■■■□□ 2.53
SPSB3-210ENST00000568416 ZMYM4Q5VZL5 1548 aa30.88■■■□□ 2.53
SPSB3-210ENST00000568416 KIF14Q15058 1648 aa30.87■■■□□ 2.53
SPSB3-210ENST00000568416 LRRIQ1Q96JM4 1722 aa30.87■■■□□ 2.53
SPSB3-210ENST00000568416 ADAMTSL3P82987 1691 aa30.87■■■□□ 2.53
SPSB3-210ENST00000568416 PCF11O94913 1555 aaKnown RBP30.85■■■□□ 2.53
SPSB3-210ENST00000568416 HECW2Q9P2P5 1572 aa30.85■■■□□ 2.53
SPSB3-210ENST00000568416 SCAPERQ9BY12 1400 aa30.85■■■□□ 2.53
SPSB3-210ENST00000568416 CLIP1P30622 1438 aa30.84■■■□□ 2.53
SPSB3-210ENST00000568416 EFCAB2Q5VUJ9 269 aa30.83■■■□□ 2.53
SPSB3-210ENST00000568416 MYO5CQ9NQX4 1742 aa30.82■■■□□ 2.52
SPSB3-210ENST00000568416 POGZQ7Z3K3 1410 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms