RNA–Protein interactions for RNA: ENST00000568309.5

SIN3A-210, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-210ENST00000568309 ABCA10Q8WWZ4 1543 aa15.1■□□□□ 0.01
SIN3A-210ENST00000568309 NPM1P06748 294 aaKnown RBP eCLIP15.09■□□□□ 0.01
SIN3A-210ENST00000568309 ADAMTS12P58397 1594 aa15.08■□□□□ 0
SIN3A-210ENST00000568309 PRG4Q92954 1404 aaPredicted RBP15.08■□□□□ 0
SIN3A-210ENST00000568309 TSPOAP1O95153 1857 aa15.07■□□□□ 0
SIN3A-210ENST00000568309 ADCY10Q96PN6 1610 aa15.02□□□□□ -0.01
SIN3A-210ENST00000568309 FHAD1B1AJZ9 1412 aa15□□□□□ -0.01
SIN3A-210ENST00000568309 JPH4Q96JJ6 628 aa14.99□□□□□ -0.01
SIN3A-210ENST00000568309 LMTK3Q96Q04 1460 aa14.95□□□□□ -0.02
SIN3A-210ENST00000568309 PPRC1Q5VV67 1664 aaKnown RBP14.92□□□□□ -0.02
SIN3A-210ENST00000568309 ERICH3Q5RHP9 1530 aa14.89□□□□□ -0.03
SIN3A-210ENST00000568309 RUSC2Q8N2Y8 1516 aa14.89□□□□□ -0.03
SIN3A-210ENST00000568309 COL17A1Q9UMD9 1497 aaPredicted RBP14.88□□□□□ -0.03
SIN3A-210ENST00000568309 GLI2P10070 1586 aa14.87□□□□□ -0.03
SIN3A-210ENST00000568309 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
SIN3A-210ENST00000568309 TOP2BQ02880 1626 aa14.85□□□□□ -0.03
SIN3A-210ENST00000568309 SOCS7O14512 581 aa14.85□□□□□ -0.03
SIN3A-210ENST00000568309 PLB1Q6P1J6 1458 aa14.81□□□□□ -0.04
SIN3A-210ENST00000568309 ASXL2Q76L83 1435 aa14.78□□□□□ -0.04
SIN3A-210ENST00000568309 ABCC2Q92887 1545 aa14.77□□□□□ -0.04
SIN3A-210ENST00000568309 ILDR2Q71H61 639 aa14.77□□□□□ -0.05
SIN3A-210ENST00000568309 TEX14Q8IWB6 1497 aa14.76□□□□□ -0.05
SIN3A-210ENST00000568309 MAP3K4Q9Y6R4 1608 aa14.75□□□□□ -0.05
SIN3A-210ENST00000568309 PTPRGP23470 1445 aa14.74□□□□□ -0.05
SIN3A-210ENST00000568309 KIAA0586Q9BVV6 1533 aa14.73□□□□□ -0.05
SIN3A-210ENST00000568309 BIVM-ERCC5R4GMW8 1640 aa14.73□□□□□ -0.05
SIN3A-210ENST00000568309 DISP3Q9P2K9 1392 aa14.71□□□□□ -0.06
SIN3A-210ENST00000568309 EPRSP07814 1512 aaKnown RBP14.71□□□□□ -0.06
SIN3A-210ENST00000568309 CUL7Q14999 1698 aa14.68□□□□□ -0.06
SIN3A-210ENST00000568309 UHRF1BP1LA0JNW5 1464 aa14.67□□□□□ -0.06
SIN3A-210ENST00000568309 TNIKQ9UKE5 1360 aa14.65□□□□□ -0.06
SIN3A-210ENST00000568309 KIF21BO75037 1637 aa14.63□□□□□ -0.07
SIN3A-210ENST00000568309 PTPRMP28827 1452 aa14.63□□□□□ -0.07
SIN3A-210ENST00000568309 PCF11O94913 1555 aaKnown RBP14.62□□□□□ -0.07
SIN3A-210ENST00000568309 TTBK1Q5TCY1 1321 aaPredicted RBP14.62□□□□□ -0.07
SIN3A-210ENST00000568309 KDM5BQ9UGL1 1544 aa14.61□□□□□ -0.07
SIN3A-210ENST00000568309 CARMIL2Q6F5E8 1435 aa14.6□□□□□ -0.07
SIN3A-210ENST00000568309 UACAQ9BZF9 1416 aa14.6□□□□□ -0.07
SIN3A-210ENST00000568309 ADAMTSL3P82987 1691 aa14.59□□□□□ -0.07
SIN3A-210ENST00000568309 CERKQ8TCT0 537 aa14.59□□□□□ -0.07
SIN3A-210ENST00000568309 MAGI3Q5TCQ9 1506 aa14.56□□□□□ -0.08
SIN3A-210ENST00000568309 SPATA31D1Q6ZQQ2 1576 aa14.55□□□□□ -0.08
SIN3A-210ENST00000568309 ZCCHC11Q5TAX3 1644 aaKnown RBP14.55□□□□□ -0.08
SIN3A-210ENST00000568309 WDR7Q9Y4E6 1490 aa14.51□□□□□ -0.09
SIN3A-210ENST00000568309 CD109Q6YHK3 1445 aa14.51□□□□□ -0.09
SIN3A-210ENST00000568309 CFAP43Q8NDM7 1665 aa14.51□□□□□ -0.09
SIN3A-210ENST00000568309 IGF1RP08069 1367 aa14.5□□□□□ -0.09
SIN3A-210ENST00000568309 ARAP3Q8WWN8 1544 aa14.46□□□□□ -0.09
SIN3A-210ENST00000568309 DISP1Q96F81 1524 aa14.46□□□□□ -0.09
SIN3A-210ENST00000568309 MADDQ8WXG6 1647 aa14.46□□□□□ -0.09
SIN3A-210ENST00000568309 IQGAP2Q13576 1575 aa14.46□□□□□ -0.09
SIN3A-210ENST00000568309 BCORL1Q5H9F3 1711 aa14.46□□□□□ -0.1
SIN3A-210ENST00000568309 HSPA2P54652 639 aa14.45□□□□□ -0.1
SIN3A-210ENST00000568309 KIF27Q86VH2 1401 aa14.4□□□□□ -0.1
SIN3A-210ENST00000568309 KCNH8Q96L42 1107 aa14.38□□□□□ -0.11
SIN3A-210ENST00000568309 RIMS1Q86UR5 1692 aaKnown RBP14.38□□□□□ -0.11
SIN3A-210ENST00000568309 CARMIL1Q5VZK9 1371 aa14.37□□□□□ -0.11
SIN3A-210ENST00000568309 PHLDB1Q86UU1 1377 aa14.36□□□□□ -0.11
SIN3A-210ENST00000568309 UGGT2Q9NYU1 1516 aa14.36□□□□□ -0.11
SIN3A-210ENST00000568309 KIAA0556O60303 1618 aa14.35□□□□□ -0.11
SIN3A-210ENST00000568309 ARID4BQ4LE39 1312 aaPredicted RBP14.35□□□□□ -0.11
SIN3A-210ENST00000568309 RAPGEF3O95398 923 aa14.31□□□□□ -0.12
SIN3A-210ENST00000568309 FRMPD1Q5SYB0 1578 aa14.29□□□□□ -0.12
SIN3A-210ENST00000568309 ABCA8O94911 1581 aa14.28□□□□□ -0.12
SIN3A-210ENST00000568309 ARHGEF40Q8TER5 1519 aa14.27□□□□□ -0.12
SIN3A-210ENST00000568309 NEO1Q92859 1461 aa14.27□□□□□ -0.12
SIN3A-210ENST00000568309 YEATS2Q9ULM3 1422 aa14.26□□□□□ -0.13
SIN3A-210ENST00000568309 PLPPR3Q6T4P5 718 aa14.26□□□□□ -0.13
SIN3A-210ENST00000568309 DMRT2Q9Y5R5 561 aa14.26□□□□□ -0.13
SIN3A-210ENST00000568309 ABCA9Q8IUA7 1624 aa14.26□□□□□ -0.13
SIN3A-210ENST00000568309 POGZQ7Z3K3 1410 aa14.24□□□□□ -0.13
SIN3A-210ENST00000568309 STRCQ7RTU9 1775 aa14.23□□□□□ -0.13
SIN3A-210ENST00000568309 IQSEC2Q5JU85 1478 aa14.22□□□□□ -0.13
SIN3A-210ENST00000568309 TTC37Q6PGP7 1564 aa14.22□□□□□ -0.13
SIN3A-210ENST00000568309 PREX1Q8TCU6 1659 aa14.21□□□□□ -0.13
SIN3A-210ENST00000568309 FANCAO15360 1455 aa14.21□□□□□ -0.13
SIN3A-210ENST00000568309 FER1L4A9Z1Z3 1794 aa14.18□□□□□ -0.14
SIN3A-210ENST00000568309 PTPRTO14522 1441 aa14.17□□□□□ -0.14
SIN3A-210ENST00000568309 LTBP4Q8N2S1 1624 aa14.17□□□□□ -0.14
SIN3A-210ENST00000568309 GOLGA3Q08378 1498 aa14.17□□□□□ -0.14
SIN3A-210ENST00000568309 AKNAQ7Z591 1439 aa14.16□□□□□ -0.14
SIN3A-210ENST00000568309 RICTORQ6R327 1708 aa14.16□□□□□ -0.14
SIN3A-210ENST00000568309 SIGLEC1Q9BZZ2 1709 aa14.16□□□□□ -0.14
SIN3A-210ENST00000568309 RAPGEF2Q9Y4G8 1499 aa14.16□□□□□ -0.14
SIN3A-210ENST00000568309 DENND4BO75064 1496 aaPredicted RBP14.15□□□□□ -0.14
SIN3A-210ENST00000568309 SUPT5HO00267 1087 aaKnown RBP14.15□□□□□ -0.14
SIN3A-210ENST00000568309 FHOD3Q2V2M9 1422 aa14.15□□□□□ -0.14
SIN3A-210ENST00000568309 ATP10BO94823 1461 aa14.14□□□□□ -0.15
SIN3A-210ENST00000568309 ZMYM4Q5VZL5 1548 aa14.12□□□□□ -0.15
SIN3A-210ENST00000568309 ZFYVE16Q7Z3T8 1539 aa14.11□□□□□ -0.15
SIN3A-210ENST00000568309 EFCAB5A4FU69 1503 aa14.1□□□□□ -0.15
SIN3A-210ENST00000568309 ARHGEF12Q9NZN5 1544 aa14.1□□□□□ -0.15
SIN3A-210ENST00000568309 UHRF1BP1Q6BDS2 1440 aa14.1□□□□□ -0.15
SIN3A-210ENST00000568309 MLECQ14165 292 aa14.1□□□□□ -0.15
SIN3A-210ENST00000568309 ARID3CA6NKF2 412 aa14.09□□□□□ -0.15
SIN3A-210ENST00000568309 CTTNBP2Q8WZ74 1663 aa14.09□□□□□ -0.15
SIN3A-210ENST00000568309 MAGI2Q86UL8 1455 aa14.08□□□□□ -0.16
SIN3A-210ENST00000568309 SETD1BQ9UPS6 1966 aaKnown RBP14.08□□□□□ -0.16
SIN3A-210ENST00000568309 CEBPAP49715 358 aaPredicted RBP14.07□□□□□ -0.16
SIN3A-210ENST00000568309 MED1Q15648 1581 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms