RNA–Protein interactions for RNA: ENST00000568080.1

GSE1-213, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 5

Gene GSE1, Length 289 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-213ENST00000568080 PRG4Q92954 1404 aaPredicted RBP25.54■■□□□ 1.68
GSE1-213ENST00000568080 RUSC2Q8N2Y8 1516 aa25.53■■□□□ 1.68
GSE1-213ENST00000568080 CARMIL1Q5VZK9 1371 aa25.45■■□□□ 1.67
GSE1-213ENST00000568080 KIAA0586Q9BVV6 1533 aa25.42■■□□□ 1.66
GSE1-213ENST00000568080 NPM1P06748 294 aaKnown RBP eCLIP25.28■■□□□ 1.64
GSE1-213ENST00000568080 RAPGEF2Q9Y4G8 1499 aa25.25■■□□□ 1.63
GSE1-213ENST00000568080 IQGAP2Q13576 1575 aa25.25■■□□□ 1.63
GSE1-213ENST00000568080 TTBK1Q5TCY1 1321 aaPredicted RBP25.23■■□□□ 1.63
GSE1-213ENST00000568080 CARMIL2Q6F5E8 1435 aa25.22■■□□□ 1.63
GSE1-213ENST00000568080 ADCY10Q96PN6 1610 aa25.19■■□□□ 1.62
GSE1-213ENST00000568080 PTPRGP23470 1445 aa25.18■■□□□ 1.62
GSE1-213ENST00000568080 KIF13AQ9H1H9 1805 aa25.15■■□□□ 1.62
GSE1-213ENST00000568080 TNIKQ9UKE5 1360 aa25.15■■□□□ 1.62
GSE1-213ENST00000568080 MAPKBP1O60336 1514 aa25.11■■□□□ 1.61
GSE1-213ENST00000568080 FAM69CQ0P6D2 419 aa25.09■■□□□ 1.61
GSE1-213ENST00000568080 ABCC10Q5T3U5 1492 aa25.06■■□□□ 1.6
GSE1-213ENST00000568080 CTTNBP2Q8WZ74 1663 aa25.06■■□□□ 1.6
GSE1-213ENST00000568080 DISP1Q96F81 1524 aa25.06■■□□□ 1.6
GSE1-213ENST00000568080 UGGT2Q9NYU1 1516 aa25.06■■□□□ 1.6
GSE1-213ENST00000568080 DIP2BQ9P265 1576 aa25.01■■□□□ 1.59
GSE1-213ENST00000568080 PRXQ9BXM0 1461 aa25■■□□□ 1.59
GSE1-213ENST00000568080 KIAA0556O60303 1618 aa25■■□□□ 1.59
GSE1-213ENST00000568080 ABCC2Q92887 1545 aa24.99■■□□□ 1.59
GSE1-213ENST00000568080 UACAQ9BZF9 1416 aa24.99■■□□□ 1.59
GSE1-213ENST00000568080 UHRF1BP1LA0JNW5 1464 aa24.95■■□□□ 1.58
GSE1-213ENST00000568080 CSRNP3Q8WYN3 585 aa24.93■■□□□ 1.58
GSE1-213ENST00000568080 GOLGA3Q08378 1498 aa24.93■■□□□ 1.58
GSE1-213ENST00000568080 TSPOAP1O95153 1857 aa24.92■■□□□ 1.58
GSE1-213ENST00000568080 ASXL2Q76L83 1435 aa24.89■■□□□ 1.58
GSE1-213ENST00000568080 PLB1Q6P1J6 1458 aa24.88■■□□□ 1.57
GSE1-213ENST00000568080 EEA1Q15075 1411 aa24.86■■□□□ 1.57
GSE1-213ENST00000568080 KDM5BQ9UGL1 1544 aa24.84■■□□□ 1.57
GSE1-213ENST00000568080 ZCCHC11Q5TAX3 1644 aaKnown RBP24.83■■□□□ 1.57
GSE1-213ENST00000568080 AEBP2Q6ZN18 517 aaPredicted RBP24.82■■□□□ 1.56
GSE1-213ENST00000568080 FAM9AQ8IZU1 332 aaPredicted RBP24.82■■□□□ 1.56
GSE1-213ENST00000568080 KDM6BO15054 1643 aa24.78■■□□□ 1.56
GSE1-213ENST00000568080 GLI2P10070 1586 aa24.77■■□□□ 1.56
GSE1-213ENST00000568080 P3H3Q8IVL6 736 aa24.77■■□□□ 1.56
GSE1-213ENST00000568080 ABCA8O94911 1581 aa24.73■■□□□ 1.55
GSE1-213ENST00000568080 EPRSP07814 1512 aaKnown RBP24.73■■□□□ 1.55
GSE1-213ENST00000568080 RANGAP1P46060 587 aaPredicted RBP24.71■■□□□ 1.55
GSE1-213ENST00000568080 WDR7Q9Y4E6 1490 aa24.69■■□□□ 1.54
GSE1-213ENST00000568080 PPRC1Q5VV67 1664 aaKnown RBP24.67■■□□□ 1.54
GSE1-213ENST00000568080 SAMD9Q5K651 1589 aa24.67■■□□□ 1.54
GSE1-213ENST00000568080 MAP3K4Q9Y6R4 1608 aa24.65■■□□□ 1.54
GSE1-213ENST00000568080 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
GSE1-213ENST00000568080 ARID3CA6NKF2 412 aa24.64■■□□□ 1.54
GSE1-213ENST00000568080 KCNH8Q96L42 1107 aa24.64■■□□□ 1.54
GSE1-213ENST00000568080 KIF21BO75037 1637 aa24.63■■□□□ 1.53
GSE1-213ENST00000568080 TEX14Q8IWB6 1497 aa24.62■■□□□ 1.53
GSE1-213ENST00000568080 EHMT2Q96KQ7 1210 aa24.59■■□□□ 1.53
GSE1-213ENST00000568080 RAPGEF6Q8TEU7 1601 aa24.56■■□□□ 1.52
GSE1-213ENST00000568080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.55■■□□□ 1.52
GSE1-213ENST00000568080 HNRNPUL2Q1KMD3 747 aaKnown RBP24.55■■□□□ 1.52
GSE1-213ENST00000568080 FHOD3Q2V2M9 1422 aa24.54■■□□□ 1.52
GSE1-213ENST00000568080 CFAP43Q8NDM7 1665 aa24.54■■□□□ 1.52
GSE1-213ENST00000568080 ATP10BO94823 1461 aa24.54■■□□□ 1.52
GSE1-213ENST00000568080 CD109Q6YHK3 1445 aa24.53■■□□□ 1.52
GSE1-213ENST00000568080 UBTFP17480 764 aaKnown RBP24.53■■□□□ 1.52
GSE1-213ENST00000568080 EFCAB5A4FU69 1503 aa24.5■■□□□ 1.51
GSE1-213ENST00000568080 MAGI3Q5TCQ9 1506 aa24.46■■□□□ 1.51
GSE1-213ENST00000568080 COL17A1Q9UMD9 1497 aaPredicted RBP24.46■■□□□ 1.51
GSE1-213ENST00000568080 NUP153P49790 1475 aaKnown RBP24.44■■□□□ 1.5
GSE1-213ENST00000568080 ABCA9Q8IUA7 1624 aa24.37■■□□□ 1.49
GSE1-213ENST00000568080 KDM4FA0A1W2PPD8 638 aa24.37■■□□□ 1.49
GSE1-213ENST00000568080 PLEKHD1A6NEE1 506 aa24.35■■□□□ 1.49
GSE1-213ENST00000568080 ATP1B4Q9UN42 357 aaPredicted RBP24.33■■□□□ 1.49
GSE1-213ENST00000568080 FMN1Q68DA7 1419 aa24.29■■□□□ 1.48
GSE1-213ENST00000568080 ARHGAP35Q9NRY4 1499 aa24.28■■□□□ 1.48
GSE1-213ENST00000568080 ADGRL1O94910 1474 aa24.27■■□□□ 1.48
GSE1-213ENST00000568080 PHLDB1Q86UU1 1377 aa24.27■■□□□ 1.48
GSE1-213ENST00000568080 ARAP3Q8WWN8 1544 aa24.26■■□□□ 1.47
GSE1-213ENST00000568080 CDK13Q14004 1512 aaKnown RBP24.25■■□□□ 1.47
GSE1-213ENST00000568080 NEO1Q92859 1461 aa24.23■■□□□ 1.47
GSE1-213ENST00000568080 HECW1Q76N89 1606 aa24.23■■□□□ 1.47
GSE1-213ENST00000568080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.18■■□□□ 1.46
GSE1-213ENST00000568080 RAPGEF3O95398 923 aa24.17■■□□□ 1.46
GSE1-213ENST00000568080 CDK11AQ9UQ88 783 aaPredicted RBP24.17■■□□□ 1.46
GSE1-213ENST00000568080 TTC37Q6PGP7 1564 aa24.16■■□□□ 1.46
GSE1-213ENST00000568080 CFAP74Q9C0B2 1584 aa24.14■■□□□ 1.45
GSE1-213ENST00000568080 FANCAO15360 1455 aa24.13■■□□□ 1.45
GSE1-213ENST00000568080 AKNAQ7Z591 1439 aa24.1■■□□□ 1.45
GSE1-213ENST00000568080 DENND4BO75064 1496 aaPredicted RBP24.08■■□□□ 1.45
GSE1-213ENST00000568080 FRMPD1Q5SYB0 1578 aa24.07■■□□□ 1.44
GSE1-213ENST00000568080 LRRIQ1Q96JM4 1722 aa24.05■■□□□ 1.44
GSE1-213ENST00000568080 CLIP1P30622 1438 aa24.05■■□□□ 1.44
GSE1-213ENST00000568080 KIF14Q15058 1648 aa24.05■■□□□ 1.44
GSE1-213ENST00000568080 MYO5CQ9NQX4 1742 aa24.04■■□□□ 1.44
GSE1-213ENST00000568080 PCF11O94913 1555 aaKnown RBP24.03■■□□□ 1.44
GSE1-213ENST00000568080 PLCH2O75038 1416 aa24.03■■□□□ 1.44
GSE1-213ENST00000568080 RICTORQ6R327 1708 aa24.03■■□□□ 1.44
GSE1-213ENST00000568080 TROQ12816 1431 aaPredicted RBP24.02■■□□□ 1.44
GSE1-213ENST00000568080 CASKIN1Q8WXD9 1431 aa24.02■■□□□ 1.44
GSE1-213ENST00000568080 ARID4BQ4LE39 1312 aaPredicted RBP24.02■■□□□ 1.44
GSE1-213ENST00000568080 CCDC18Q5T9S5 1454 aa24■■□□□ 1.43
GSE1-213ENST00000568080 EFCAB2Q5VUJ9 269 aa23.98■■□□□ 1.43
GSE1-213ENST00000568080 ARHGEF40Q8TER5 1519 aa23.96■■□□□ 1.43
GSE1-213ENST00000568080 SCAPERQ9BY12 1400 aa23.96■■□□□ 1.43
GSE1-213ENST00000568080 FYCO1Q9BQS8 1478 aa23.95■■□□□ 1.42
GSE1-213ENST00000568080 ARHGAP5Q13017 1502 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms