RNA–Protein interactions for RNA: ENST00000567339.1

GGA2-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 3

Gene GGA2, Length 293 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-210ENST00000567339 SHROOM2Q13796 1616 aa16.3■□□□□ 0.2
GGA2-210ENST00000567339 FAM9AQ8IZU1 332 aaPredicted RBP16.29■□□□□ 0.2
GGA2-210ENST00000567339 JPH4Q96JJ6 628 aa16.27■□□□□ 0.2
GGA2-210ENST00000567339 IQGAP2Q13576 1575 aa16.26■□□□□ 0.19
GGA2-210ENST00000567339 RIMBP3CA6NJZ7 1639 aa16.25■□□□□ 0.19
GGA2-210ENST00000567339 RIMBP3BA6NNM3 1639 aa16.25■□□□□ 0.19
GGA2-210ENST00000567339 RIMBP3Q9UFD9 1639 aa16.25■□□□□ 0.19
GGA2-210ENST00000567339 PRG4Q92954 1404 aaPredicted RBP16.22■□□□□ 0.19
GGA2-210ENST00000567339 GOLGA3Q08378 1498 aa16.22■□□□□ 0.19
GGA2-210ENST00000567339 CTTNBP2Q8WZ74 1663 aa16.21■□□□□ 0.19
GGA2-210ENST00000567339 CARMIL2Q6F5E8 1435 aa16.2■□□□□ 0.18
GGA2-210ENST00000567339 UGGT2Q9NYU1 1516 aa16.2■□□□□ 0.18
GGA2-210ENST00000567339 ARAP1Q96P48 1450 aa16.18■□□□□ 0.18
GGA2-210ENST00000567339 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
GGA2-210ENST00000567339 UBTFP17480 764 aaKnown RBP16.12■□□□□ 0.17
GGA2-210ENST00000567339 DISP1Q96F81 1524 aa16.12■□□□□ 0.17
GGA2-210ENST00000567339 TNIKQ9UKE5 1360 aa16.12■□□□□ 0.17
GGA2-210ENST00000567339 CYB5RLQ6IPT4 315 aa16.11■□□□□ 0.17
GGA2-210ENST00000567339 KIAA0556O60303 1618 aa16.09■□□□□ 0.17
GGA2-210ENST00000567339 PTPRGP23470 1445 aa16.07■□□□□ 0.16
GGA2-210ENST00000567339 EFCAB5A4FU69 1503 aa16.07■□□□□ 0.16
GGA2-210ENST00000567339 SAMD9Q5K651 1589 aa16.04■□□□□ 0.16
GGA2-210ENST00000567339 EHMT2Q96KQ7 1210 aa16■□□□□ 0.15
GGA2-210ENST00000567339 UHRF1BP1LA0JNW5 1464 aa15.98■□□□□ 0.15
GGA2-210ENST00000567339 UACAQ9BZF9 1416 aa15.98■□□□□ 0.15
GGA2-210ENST00000567339 ABCC2Q92887 1545 aa15.94■□□□□ 0.14
GGA2-210ENST00000567339 ARHGAP35Q9NRY4 1499 aa15.94■□□□□ 0.14
GGA2-210ENST00000567339 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
GGA2-210ENST00000567339 RANGAP1P46060 587 aaPredicted RBP15.93■□□□□ 0.14
GGA2-210ENST00000567339 ADCY10Q96PN6 1610 aa15.93■□□□□ 0.14
GGA2-210ENST00000567339 FHOD3Q2V2M9 1422 aa15.93■□□□□ 0.14
GGA2-210ENST00000567339 CLIP1P30622 1438 aa15.92■□□□□ 0.14
GGA2-210ENST00000567339 FMN1Q68DA7 1419 aa15.92■□□□□ 0.14
GGA2-210ENST00000567339 TTBK1Q5TCY1 1321 aaPredicted RBP15.92■□□□□ 0.14
GGA2-210ENST00000567339 ABCA8O94911 1581 aa15.92■□□□□ 0.14
GGA2-210ENST00000567339 P3H3Q8IVL6 736 aa15.91■□□□□ 0.14
GGA2-210ENST00000567339 PLB1Q6P1J6 1458 aa15.9■□□□□ 0.14
GGA2-210ENST00000567339 KDM5BQ9UGL1 1544 aa15.88■□□□□ 0.13
GGA2-210ENST00000567339 CEP162Q5TB80 1403 aa15.87■□□□□ 0.13
GGA2-210ENST00000567339 MAPKBP1O60336 1514 aa15.87■□□□□ 0.13
GGA2-210ENST00000567339 LOC105371045A0A1W2PR82 267 aa15.85■□□□□ 0.13
GGA2-210ENST00000567339 RAPGEF6Q8TEU7 1601 aa15.85■□□□□ 0.13
GGA2-210ENST00000567339 NUP153P49790 1475 aaKnown RBP15.8■□□□□ 0.12
GGA2-210ENST00000567339 ZCCHC11Q5TAX3 1644 aaKnown RBP15.79■□□□□ 0.12
GGA2-210ENST00000567339 HECW1Q76N89 1606 aa15.79■□□□□ 0.12
GGA2-210ENST00000567339 ASXL2Q76L83 1435 aa15.77■□□□□ 0.12
GGA2-210ENST00000567339 CASKIN1Q8WXD9 1431 aa15.77■□□□□ 0.12
GGA2-210ENST00000567339 ATP10BO94823 1461 aa15.77■□□□□ 0.11
GGA2-210ENST00000567339 ABCC10Q5T3U5 1492 aa15.76■□□□□ 0.11
GGA2-210ENST00000567339 FYCO1Q9BQS8 1478 aa15.76■□□□□ 0.11
GGA2-210ENST00000567339 WDR7Q9Y4E6 1490 aa15.75■□□□□ 0.11
GGA2-210ENST00000567339 CCDC18Q5T9S5 1454 aa15.73■□□□□ 0.11
GGA2-210ENST00000567339 TRHP20396 242 aaPredicted RBP15.73■□□□□ 0.11
GGA2-210ENST00000567339 EPRSP07814 1512 aaKnown RBP15.73■□□□□ 0.11
GGA2-210ENST00000567339 PCF11O94913 1555 aaKnown RBP15.72■□□□□ 0.11
GGA2-210ENST00000567339 CDK11AQ9UQ88 783 aaPredicted RBP15.71■□□□□ 0.11
GGA2-210ENST00000567339 DIP2BQ9P265 1576 aa15.7■□□□□ 0.1
GGA2-210ENST00000567339 VPS8Q8N3P4 1428 aa15.7■□□□□ 0.1
GGA2-210ENST00000567339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.7■□□□□ 0.1
GGA2-210ENST00000567339 HNRNPUL2Q1KMD3 747 aaKnown RBP15.7■□□□□ 0.1
GGA2-210ENST00000567339 GLI2P10070 1586 aa15.7■□□□□ 0.1
GGA2-210ENST00000567339 ATP1B4Q9UN42 357 aaPredicted RBP15.69■□□□□ 0.1
GGA2-210ENST00000567339 PLEKHD1A6NEE1 506 aa15.68■□□□□ 0.1
GGA2-210ENST00000567339 FAM69CQ0P6D2 419 aa15.68■□□□□ 0.1
GGA2-210ENST00000567339 ARID3CA6NKF2 412 aa15.67■□□□□ 0.1
GGA2-210ENST00000567339 CDK13Q14004 1512 aaKnown RBP15.66■□□□□ 0.1
GGA2-210ENST00000567339 KIF13AQ9H1H9 1805 aa15.64■□□□□ 0.09
GGA2-210ENST00000567339 TROQ12816 1431 aaPredicted RBP15.61■□□□□ 0.09
GGA2-210ENST00000567339 MAP3K4Q9Y6R4 1608 aa15.59■□□□□ 0.09
GGA2-210ENST00000567339 KCNH8Q96L42 1107 aa15.59■□□□□ 0.09
GGA2-210ENST00000567339 CFAP43Q8NDM7 1665 aa15.59■□□□□ 0.09
GGA2-210ENST00000567339 MAP3K1Q13233 1512 aa15.58■□□□□ 0.09
GGA2-210ENST00000567339 ABCA9Q8IUA7 1624 aa15.58■□□□□ 0.09
GGA2-210ENST00000567339 LRRIQ1Q96JM4 1722 aa15.58■□□□□ 0.08
GGA2-210ENST00000567339 TEX14Q8IWB6 1497 aa15.58■□□□□ 0.08
GGA2-210ENST00000567339 CD109Q6YHK3 1445 aa15.57■□□□□ 0.08
GGA2-210ENST00000567339 MAGI3Q5TCQ9 1506 aa15.57■□□□□ 0.08
GGA2-210ENST00000567339 KIF14Q15058 1648 aa15.56■□□□□ 0.08
GGA2-210ENST00000567339 MTUS2Q5JR59 1369 aa15.55■□□□□ 0.08
GGA2-210ENST00000567339 TIAM1Q13009 1591 aa15.53■□□□□ 0.08
GGA2-210ENST00000567339 EHBP1L1Q8N3D4 1523 aa15.53■□□□□ 0.08
GGA2-210ENST00000567339 APLP2Q06481 763 aa15.53■□□□□ 0.08
GGA2-210ENST00000567339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.53■□□□□ 0.08
GGA2-210ENST00000567339 PHLDB1Q86UU1 1377 aa15.52■□□□□ 0.08
GGA2-210ENST00000567339 ARAP3Q8WWN8 1544 aa15.51■□□□□ 0.07
GGA2-210ENST00000567339 TTC37Q6PGP7 1564 aa15.49■□□□□ 0.07
GGA2-210ENST00000567339 PPRC1Q5VV67 1664 aaKnown RBP15.48■□□□□ 0.07
GGA2-210ENST00000567339 NEO1Q92859 1461 aa15.48■□□□□ 0.07
GGA2-210ENST00000567339 PLCH2O75038 1416 aa15.48■□□□□ 0.07
GGA2-210ENST00000567339 LRRC9Q6ZRR7 1453 aa15.47■□□□□ 0.07
GGA2-210ENST00000567339 TSPOAP1O95153 1857 aa15.47■□□□□ 0.07
GGA2-210ENST00000567339 CFAP74Q9C0B2 1584 aa15.47■□□□□ 0.07
GGA2-210ENST00000567339 FANCAO15360 1455 aa15.45■□□□□ 0.06
GGA2-210ENST00000567339 MYO5CQ9NQX4 1742 aa15.44■□□□□ 0.06
GGA2-210ENST00000567339 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
GGA2-210ENST00000567339 CCNB3Q8WWL7 1395 aa15.42■□□□□ 0.06
GGA2-210ENST00000567339 EFCAB2Q5VUJ9 269 aa15.42■□□□□ 0.06
GGA2-210ENST00000567339 KDM6BO15054 1643 aa15.42■□□□□ 0.06
GGA2-210ENST00000567339 PREX2Q70Z35 1606 aa15.41■□□□□ 0.06
GGA2-210ENST00000567339 NCOA2Q15596 1464 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms