RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 TMC1Q8TDI8 760 aa15.89■□□□□ 0.14
SIN3A-208ENST00000567289 GOLGA3Q08378 1498 aa15.89■□□□□ 0.13
SIN3A-208ENST00000567289 ZNF777Q9ULD5 760 aaPredicted RBP15.89■□□□□ 0.13
SIN3A-208ENST00000567289 RRP7BPQ9NSQ0 103 aa15.88■□□□□ 0.13
SIN3A-208ENST00000567289 CANXP27824 592 aaKnown RBP15.82■□□□□ 0.12
SIN3A-208ENST00000567289 EIF4G2P78344 907 aaKnown RBP eCLIP15.82■□□□□ 0.12
SIN3A-208ENST00000567289 NOP58Q9Y2X3 529 aaKnown RBP15.82■□□□□ 0.12
SIN3A-208ENST00000567289 NACADO15069 1562 aa15.81■□□□□ 0.12
SIN3A-208ENST00000567289 KDM2AQ9Y2K7 1162 aa15.81■□□□□ 0.12
SIN3A-208ENST00000567289 PPP4R2Q9NY27 417 aa15.8■□□□□ 0.12
SIN3A-208ENST00000567289 WRNQ14191 1432 aaPredicted RBP eCLIP15.77■□□□□ 0.11
SIN3A-208ENST00000567289 RUSC2Q8N2Y8 1516 aa15.77■□□□□ 0.11
SIN3A-208ENST00000567289 NEFMP07197 916 aa15.76■□□□□ 0.11
SIN3A-208ENST00000567289 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.75■□□□□ 0.11
SIN3A-208ENST00000567289 BAZ1AQ9NRL2 1556 aaPredicted RBP15.75■□□□□ 0.11
SIN3A-208ENST00000567289 FBLN2P98095 1184 aa15.73■□□□□ 0.11
SIN3A-208ENST00000567289 EEA1Q15075 1411 aa15.71■□□□□ 0.11
SIN3A-208ENST00000567289 CCNB3Q8WWL7 1395 aa15.7■□□□□ 0.1
SIN3A-208ENST00000567289 MTUS2Q5JR59 1369 aa15.69■□□□□ 0.1
SIN3A-208ENST00000567289 CEP164Q9UPV0 1460 aa15.68■□□□□ 0.1
SIN3A-208ENST00000567289 VPS8Q8N3P4 1428 aa15.64■□□□□ 0.09
SIN3A-208ENST00000567289 CCER2I3L3R5 266 aa15.63■□□□□ 0.09
SIN3A-208ENST00000567289 FOXD1Q16676 465 aa15.63■□□□□ 0.09
SIN3A-208ENST00000567289 DHX57Q6P158 1386 aaKnown RBP15.63■□□□□ 0.09
SIN3A-208ENST00000567289 RAB3GAP2Q9H2M9 1393 aa15.63■□□□□ 0.09
SIN3A-208ENST00000567289 BAZ1BQ9UIG0 1483 aaKnown RBP15.62■□□□□ 0.09
SIN3A-208ENST00000567289 RGS3P49796 1198 aa15.61■□□□□ 0.09
SIN3A-208ENST00000567289 TOP2AP11388 1531 aaKnown RBP15.61■□□□□ 0.09
SIN3A-208ENST00000567289 HSPA5P11021 654 aaKnown RBP15.6■□□□□ 0.09
SIN3A-208ENST00000567289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.083e-9■■■□□ 16
SIN3A-208ENST00000567289 PPP1R15AO75807 674 aaPredicted RBP15.57■□□□□ 0.08
SIN3A-208ENST00000567289 RGL3Q3MIN7 710 aa15.57■□□□□ 0.08
SIN3A-208ENST00000567289 HSP90AA1P07900 732 aaKnown RBP15.55■□□□□ 0.08
SIN3A-208ENST00000567289 SMARCA2P51531 1590 aa15.54■□□□□ 0.08
SIN3A-208ENST00000567289 UPF2Q9HAU5 1272 aaKnown RBP15.52■□□□□ 0.08
SIN3A-208ENST00000567289 SETD5Q9C0A6 1442 aa15.51■□□□□ 0.07
SIN3A-208ENST00000567289 WDR43Q15061 677 aaKnown RBP eCLIP15.5■□□□□ 0.07
SIN3A-208ENST00000567289 PPM1GO15355 546 aaPredicted RBP15.5■□□□□ 0.07
SIN3A-208ENST00000567289 SMARCA4P51532 1647 aa15.5■□□□□ 0.07
SIN3A-208ENST00000567289 SENP3Q9H4L4 574 aaPredicted RBP15.5■□□□□ 0.07
SIN3A-208ENST00000567289 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.47■□□□□ 0.07
SIN3A-208ENST00000567289 ARID4BQ4LE39 1312 aaPredicted RBP15.47■□□□□ 0.07
SIN3A-208ENST00000567289 CARD11Q9BXL7 1154 aa15.47■□□□□ 0.07
SIN3A-208ENST00000567289 DDRGK1Q96HY6 314 aa15.46■□□□□ 0.07
SIN3A-208ENST00000567289 SLC4A3P48751 1232 aa15.46■□□□□ 0.07
SIN3A-208ENST00000567289 CC2D1BQ5T0F9 858 aaKnown RBP15.46■□□□□ 0.07
SIN3A-208ENST00000567289 GLIPR1L2Q4G1C9 344 aa15.46■□□□□ 0.06
SIN3A-208ENST00000567289 IPO9Q96P70 1041 aaKnown RBP15.46■□□□□ 0.06
SIN3A-208ENST00000567289 NEUROD2Q15784 382 aa15.45■□□□□ 0.06
SIN3A-208ENST00000567289 RAPGEF2Q9Y4G8 1499 aa15.45■□□□□ 0.06
SIN3A-208ENST00000567289 EIF4G1Q04637 1599 aaKnown RBP15.44■□□□□ 0.06
SIN3A-208ENST00000567289 SPRYD3Q8NCJ5 442 aa15.43■□□□□ 0.06
SIN3A-208ENST00000567289 KIF27Q86VH2 1401 aa15.42■□□□□ 0.06
SIN3A-208ENST00000567289 CHGAP10645 457 aaKnown RBP15.42■□□□□ 0.06
SIN3A-208ENST00000567289 NAP1L5Q96NT1 182 aaPredicted RBP15.42■□□□□ 0.06
SIN3A-208ENST00000567289 ANO8Q9HCE9 1232 aaPredicted RBP15.42■□□□□ 0.06
SIN3A-208ENST00000567289 MSH5O43196 834 aa15.41■□□□□ 0.06
SIN3A-208ENST00000567289 TIMELESSQ9UNS1 1208 aa15.4■□□□□ 0.06
SIN3A-208ENST00000567289 SLC24A1O60721 1099 aa15.4■□□□□ 0.06
SIN3A-208ENST00000567289 FANCIQ9NVI1 1328 aa15.39■□□□□ 0.05
SIN3A-208ENST00000567289 PAK3O75914 559 aaPredicted RBP15.39■□□□□ 0.05
SIN3A-208ENST00000567289 ANP32BQ92688 251 aaKnown RBP15.39■□□□□ 0.05
SIN3A-208ENST00000567289 L3MBTL2Q969R5 705 aa15.38■□□□□ 0.05
SIN3A-208ENST00000567289 ERICH6BQ5W0A0 696 aa15.37■□□□□ 0.05
SIN3A-208ENST00000567289 FRAT1Q92837 279 aaPredicted RBP15.37■□□□□ 0.05
SIN3A-208ENST00000567289 SLKQ9H2G2 1235 aaPredicted RBP15.36■□□□□ 0.05
SIN3A-208ENST00000567289 TSPY4P0CV99 314 aa15.35■□□□□ 0.05
SIN3A-208ENST00000567289 TSPY10P0CW01 314 aa15.35■□□□□ 0.05
SIN3A-208ENST00000567289 PLIN1O60240 522 aa15.34■□□□□ 0.05
SIN3A-208ENST00000567289 IL27Q8NEV9 243 aa15.34■□□□□ 0.05
SIN3A-208ENST00000567289 RCAN3Q9UKA8 241 aa15.34■□□□□ 0.05
SIN3A-208ENST00000567289 GZF1Q9H116 711 aaPredicted RBP15.33■□□□□ 0.05
SIN3A-208ENST00000567289 BECN1Q14457 450 aa15.33■□□□□ 0.04
SIN3A-208ENST00000567289 NUDCQ9Y266 331 aa15.33■□□□□ 0.04
SIN3A-208ENST00000567289 TNNT2P45379 298 aaPredicted RBP15.32■□□□□ 0.04
SIN3A-208ENST00000567289 PRKRIP1Q9H875 184 aaPredicted RBP15.32■□□□□ 0.04
SIN3A-208ENST00000567289 TRIM44Q96DX7 344 aaPredicted RBP15.32■□□□□ 0.04
SIN3A-208ENST00000567289 DCAF11Q8TEB1 546 aa15.31■□□□□ 0.04
SIN3A-208ENST00000567289 EXOC6Q8TAG9 804 aa15.31■□□□□ 0.04
SIN3A-208ENST00000567289 SYNJ1O43426 1573 aa15.31■□□□□ 0.04
SIN3A-208ENST00000567289 TPRNQ4KMQ1 711 aa15.3■□□□□ 0.04
SIN3A-208ENST00000567289 CCDC184Q52MB2 194 aa15.29■□□□□ 0.04
SIN3A-208ENST00000567289 MPHOSPH9Q99550 1183 aa15.29■□□□□ 0.04
SIN3A-208ENST00000567289 CARMIL1Q5VZK9 1371 aa15.28■□□□□ 0.04
SIN3A-208ENST00000567289 KIF21BO75037 1637 aa15.28■□□□□ 0.04
SIN3A-208ENST00000567289 NCLP19338 710 aaKnown RBP15.28■□□□□ 0.04
SIN3A-208ENST00000567289 CFDP1Q9UEE9 299 aaPredicted RBP15.28■□□□□ 0.04
SIN3A-208ENST00000567289 PDE4AP27815 886 aa15.27■□□□□ 0.04
SIN3A-208ENST00000567289 KNSTRNQ9Y448 316 aa15.26■□□□□ 0.03
SIN3A-208ENST00000567289 TCERG1O14776 1098 aaKnown RBP15.26■□□□□ 0.03
SIN3A-208ENST00000567289 CUX2O14529 1486 aa15.25■□□□□ 0.03
SIN3A-208ENST00000567289 ARID3AQ99856 593 aa15.23■□□□□ 0.03
SIN3A-208ENST00000567289 PKD2Q13563 968 aa15.21■□□□□ 0.03
SIN3A-208ENST00000567289 ZBTB7CA1YPR0 619 aa15.2■□□□□ 0.02
SIN3A-208ENST00000567289 ARHGAP35Q9NRY4 1499 aa15.2■□□□□ 0.02
SIN3A-208ENST00000567289 ZBED9Q6R2W3 1325 aa15.19■□□□□ 0.02
SIN3A-208ENST00000567289 BRPF3Q9ULD4 1205 aa15.19■□□□□ 0.02
SIN3A-208ENST00000567289 FHAD1B1AJZ9 1412 aa15.19■□□□□ 0.02
SIN3A-208ENST00000567289 WASHC2AQ641Q2 1341 aa15.18■□□□□ 0.02
SIN3A-208ENST00000567289 ATAD2BQ9ULI0 1458 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms