RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 ARHGAP35Q9NRY4 1499 aa18.36■□□□□ 0.53
BBS4-213ENST00000567279 FHAD1B1AJZ9 1412 aa18.34■□□□□ 0.53
BBS4-213ENST00000567279 SNAPC4Q5SXM2 1469 aa18.3■□□□□ 0.52
BBS4-213ENST00000567279 EFCAB5A4FU69 1503 aa18.26■□□□□ 0.51
BBS4-213ENST00000567279 TTBK1Q5TCY1 1321 aaPredicted RBP18.26■□□□□ 0.51
BBS4-213ENST00000567279 MAGI1Q96QZ7 1491 aaPredicted RBP18.23■□□□□ 0.51
BBS4-213ENST00000567279 APLP2Q06481 763 aa18.21■□□□□ 0.51
BBS4-213ENST00000567279 IQGAP2Q13576 1575 aa18.19■□□□□ 0.5
BBS4-213ENST00000567279 SAMD9Q5K651 1589 aa18.19■□□□□ 0.5
BBS4-213ENST00000567279 GRIN2AQ12879 1464 aa18.19■□□□□ 0.5
BBS4-213ENST00000567279 FHOD3Q2V2M9 1422 aa18.19■□□□□ 0.5
BBS4-213ENST00000567279 P3H3Q8IVL6 736 aa18.17■□□□□ 0.5
BBS4-213ENST00000567279 SYNJ2O15056 1496 aa18.17■□□□□ 0.5
BBS4-213ENST00000567279 PCF11O94913 1555 aaKnown RBP18.15■□□□□ 0.5
BBS4-213ENST00000567279 CHMP7Q8WUX9 453 aaPredicted RBP18.1■□□□□ 0.49
BBS4-213ENST00000567279 CEP170Q5SW79 1584 aa18.1■□□□□ 0.49
BBS4-213ENST00000567279 KIAA0586Q9BVV6 1533 aa18.09■□□□□ 0.49
BBS4-213ENST00000567279 TIAM1Q13009 1591 aa18.08■□□□□ 0.48
BBS4-213ENST00000567279 CFAP43Q8NDM7 1665 aa18.08■□□□□ 0.48
BBS4-213ENST00000567279 FYCO1Q9BQS8 1478 aa18.07■□□□□ 0.48
BBS4-213ENST00000567279 FBLN2P98095 1184 aa18.07■□□□□ 0.48
BBS4-213ENST00000567279 UGGT2Q9NYU1 1516 aa18.07■□□□□ 0.48
BBS4-213ENST00000567279 FMN1Q68DA7 1419 aa18.07■□□□□ 0.48
BBS4-213ENST00000567279 CASKIN1Q8WXD9 1431 aa18.05■□□□□ 0.48
BBS4-213ENST00000567279 MAP3K1Q13233 1512 aa18.04■□□□□ 0.48
BBS4-213ENST00000567279 CHD1O14646 1710 aa18.03■□□□□ 0.48
BBS4-213ENST00000567279 NUP160Q12769 1436 aa18.03■□□□□ 0.48
BBS4-213ENST00000567279 KANK4Q5T7N3 995 aaPredicted RBP18.02■□□□□ 0.48
BBS4-213ENST00000567279 KIAA0556O60303 1618 aa18.01■□□□□ 0.47
BBS4-213ENST00000567279 ATP1B4Q9UN42 357 aaPredicted RBP18.01■□□□□ 0.47
BBS4-213ENST00000567279 DISP1Q96F81 1524 aa17.98■□□□□ 0.47
BBS4-213ENST00000567279 LRRIQ1Q96JM4 1722 aa17.97■□□□□ 0.47
BBS4-213ENST00000567279 LRRC9Q6ZRR7 1453 aa17.96■□□□□ 0.47
BBS4-213ENST00000567279 AEBP2Q6ZN18 517 aaPredicted RBP17.95■□□□□ 0.46
BBS4-213ENST00000567279 HECW1Q76N89 1606 aa17.94■□□□□ 0.46
BBS4-213ENST00000567279 HRCP23327 699 aa17.92■□□□□ 0.46
BBS4-213ENST00000567279 CARMIL2Q6F5E8 1435 aa17.87■□□□□ 0.45
BBS4-213ENST00000567279 CCDC18Q5T9S5 1454 aa17.87■□□□□ 0.45
BBS4-213ENST00000567279 JPH4Q96JJ6 628 aa17.86■□□□□ 0.45
BBS4-213ENST00000567279 RAPGEF6Q8TEU7 1601 aa17.85■□□□□ 0.45
BBS4-213ENST00000567279 RRBP1Q9P2E9 1410 aaKnown RBP17.85■□□□□ 0.45
BBS4-213ENST00000567279 EPRSP07814 1512 aaKnown RBP17.82■□□□□ 0.44
BBS4-213ENST00000567279 EHBP1L1Q8N3D4 1523 aa17.82■□□□□ 0.44
BBS4-213ENST00000567279 MTUS2Q5JR59 1369 aa17.82■□□□□ 0.44
BBS4-213ENST00000567279 CDK13Q14004 1512 aaKnown RBP17.82■□□□□ 0.44
BBS4-213ENST00000567279 HNRNPUL2Q1KMD3 747 aaKnown RBP17.81■□□□□ 0.44
BBS4-213ENST00000567279 SHROOM2Q13796 1616 aa17.8■□□□□ 0.44
BBS4-213ENST00000567279 PHLDB1Q86UU1 1377 aa17.8■□□□□ 0.44
BBS4-213ENST00000567279 CCNB3Q8WWL7 1395 aa17.79■□□□□ 0.44
BBS4-213ENST00000567279 PRG4Q92954 1404 aaPredicted RBP17.79■□□□□ 0.44
BBS4-213ENST00000567279 SUPT6HQ7KZ85 1726 aaKnown RBP17.79■□□□□ 0.44
BBS4-213ENST00000567279 MAGI3Q5TCQ9 1506 aa17.78■□□□□ 0.44
BBS4-213ENST00000567279 NUP153P49790 1475 aaKnown RBP17.78■□□□□ 0.44
BBS4-213ENST00000567279 CLASP1Q7Z460 1538 aa17.76■□□□□ 0.43
BBS4-213ENST00000567279 PLB1Q6P1J6 1458 aa17.76■□□□□ 0.43
BBS4-213ENST00000567279 ARID3CA6NKF2 412 aa17.75■□□□□ 0.43
BBS4-213ENST00000567279 NCOA2Q15596 1464 aa17.73■□□□□ 0.43
BBS4-213ENST00000567279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
BBS4-213ENST00000567279 ABCA8O94911 1581 aa17.72■□□□□ 0.43
BBS4-213ENST00000567279 ERCC6L2Q5T890 1561 aa17.69■□□□□ 0.42
BBS4-213ENST00000567279 ARHGEF11O15085 1522 aa17.69■□□□□ 0.42
BBS4-213ENST00000567279 PTPRGP23470 1445 aa17.67■□□□□ 0.42
BBS4-213ENST00000567279 FGD6Q6ZV73 1430 aa17.67■□□□□ 0.42
BBS4-213ENST00000567279 CCER1Q8TC90 406 aaPredicted RBP17.67■□□□□ 0.42
BBS4-213ENST00000567279 MYOM3Q5VTT5 1437 aa17.66■□□□□ 0.42
BBS4-213ENST00000567279 ZEB1P37275 1124 aaPredicted RBP17.66■□□□□ 0.42
BBS4-213ENST00000567279 FAM50AQ14320 339 aaKnown RBP17.65■□□□□ 0.42
BBS4-213ENST00000567279 ITGAEP38570 1179 aa17.65■□□□□ 0.42
BBS4-213ENST00000567279 CDK11AQ9UQ88 783 aaPredicted RBP17.61■□□□□ 0.41
BBS4-213ENST00000567279 PTPN23Q9H3S7 1636 aa17.61■□□□□ 0.41
BBS4-213ENST00000567279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.6■□□□□ 0.41
BBS4-213ENST00000567279 ADCY10Q96PN6 1610 aa17.6■□□□□ 0.41
BBS4-213ENST00000567279 TROQ12816 1431 aaPredicted RBP17.6■□□□□ 0.41
BBS4-213ENST00000567279 ATP10BO94823 1461 aa17.58■□□□□ 0.4
BBS4-213ENST00000567279 UACAQ9BZF9 1416 aa17.58■□□□□ 0.4
BBS4-213ENST00000567279 KIF14Q15058 1648 aa17.57■□□□□ 0.4
BBS4-213ENST00000567279 ABCC2Q92887 1545 aa17.56■□□□□ 0.4
BBS4-213ENST00000567279 TCOF1Q13428 1488 aaKnown RBP17.54■□□□□ 0.4
BBS4-213ENST00000567279 ITSN2Q9NZM3 1697 aa17.54■□□□□ 0.4
BBS4-213ENST00000567279 MIA2Q96PC5 1412 aa17.52■□□□□ 0.4
BBS4-213ENST00000567279 PLEKHD1A6NEE1 506 aa17.5■□□□□ 0.39
BBS4-213ENST00000567279 OSCARQ8IYS5 282 aa17.48■□□□□ 0.39
BBS4-213ENST00000567279 SETD5Q9C0A6 1442 aa17.48■□□□□ 0.39
BBS4-213ENST00000567279 RAB3GAP2Q9H2M9 1393 aa17.47■□□□□ 0.39
BBS4-213ENST00000567279 ZCCHC11Q5TAX3 1644 aaKnown RBP17.47■□□□□ 0.39
BBS4-213ENST00000567279 UHRF1BP1LA0JNW5 1464 aa17.46■□□□□ 0.39
BBS4-213ENST00000567279 CDC42BPAQ5VT25 1732 aa17.46■□□□□ 0.39
BBS4-213ENST00000567279 PTPRKQ15262 1439 aa17.46■□□□□ 0.38
BBS4-213ENST00000567279 GPATCH8Q9UKJ3 1502 aaKnown RBP17.44■□□□□ 0.38
BBS4-213ENST00000567279 DHX57Q6P158 1386 aaKnown RBP17.44■□□□□ 0.38
BBS4-213ENST00000567279 ABCC10Q5T3U5 1492 aa17.44■□□□□ 0.38
BBS4-213ENST00000567279 CAMSAP2Q08AD1 1489 aa17.42■□□□□ 0.38
BBS4-213ENST00000567279 DNMT1P26358 1616 aaKnown RBP17.41■□□□□ 0.38
BBS4-213ENST00000567279 KDM5BQ9UGL1 1544 aa17.41■□□□□ 0.38
BBS4-213ENST00000567279 CFDP1Q9UEE9 299 aaPredicted RBP17.39■□□□□ 0.38
BBS4-213ENST00000567279 GCC2Q8IWJ2 1684 aa17.39■□□□□ 0.37
BBS4-213ENST00000567279 HFM1A2PYH4 1435 aa17.39■□□□□ 0.37
BBS4-213ENST00000567279 PREX2Q70Z35 1606 aa17.38■□□□□ 0.37
BBS4-213ENST00000567279 DAPK1P53355 1430 aa17.38■□□□□ 0.37
BBS4-213ENST00000567279 TTC37Q6PGP7 1564 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms