RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 RAD54L2Q9Y4B4 1467 aa18.42■□□□□ 0.54
LINC00564-201ENST00000567258 CHD1O14646 1710 aa18.42■□□□□ 0.54
LINC00564-201ENST00000567258 CUX1P39880 1505 aa18.41■□□□□ 0.54
LINC00564-201ENST00000567258 FBLN2P98095 1184 aa18.4■□□□□ 0.54
LINC00564-201ENST00000567258 WDR97A6NE52 1622 aa18.39■□□□□ 0.53
LINC00564-201ENST00000567258 TDRD9Q8NDG6 1382 aaKnown RBP18.37■□□□□ 0.53
LINC00564-201ENST00000567258 RIMBP3CA6NJZ7 1639 aa18.34■□□□□ 0.53
LINC00564-201ENST00000567258 RIMBP3BA6NNM3 1639 aa18.34■□□□□ 0.53
LINC00564-201ENST00000567258 RIMBP3Q9UFD9 1639 aa18.34■□□□□ 0.53
LINC00564-201ENST00000567258 MYCNP04198 464 aaPredicted RBP18.32■□□□□ 0.52
LINC00564-201ENST00000567258 RBM42Q9BTD8 480 aaKnown RBP18.3■□□□□ 0.52
LINC00564-201ENST00000567258 SNAPC4Q5SXM2 1469 aa18.28■□□□□ 0.52
LINC00564-201ENST00000567258 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
LINC00564-201ENST00000567258 GRIN2BQ13224 1484 aa18.27■□□□□ 0.52
LINC00564-201ENST00000567258 CHMP7Q8WUX9 453 aaPredicted RBP18.27■□□□□ 0.52
LINC00564-201ENST00000567258 ARHGEF11O15085 1522 aa18.27■□□□□ 0.51
LINC00564-201ENST00000567258 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
LINC00564-201ENST00000567258 POLA2Q14181 598 aa18.26■□□□□ 0.51
LINC00564-201ENST00000567258 GAPVD1Q14C86 1478 aa18.24■□□□□ 0.51
LINC00564-201ENST00000567258 BIVM-ERCC5R4GMW8 1640 aa18.22■□□□□ 0.51
LINC00564-201ENST00000567258 ABCA10Q8WWZ4 1543 aa18.22■□□□□ 0.51
LINC00564-201ENST00000567258 WRNQ14191 1432 aaPredicted RBP eCLIP18.22■□□□□ 0.51
LINC00564-201ENST00000567258 SYNJ1O43426 1573 aa18.21■□□□□ 0.51
LINC00564-201ENST00000567258 TOP2BQ02880 1626 aa18.21■□□□□ 0.51
LINC00564-201ENST00000567258 SYNJ2O15056 1496 aa18.19■□□□□ 0.5
LINC00564-201ENST00000567258 ABCA5Q8WWZ7 1642 aa18.18■□□□□ 0.5
LINC00564-201ENST00000567258 CYB5RLQ6IPT4 315 aa18.16■□□□□ 0.5
LINC00564-201ENST00000567258 CLASP1Q7Z460 1538 aa18.11■□□□□ 0.49
LINC00564-201ENST00000567258 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
LINC00564-201ENST00000567258 CHRDL2Q6WN34 429 aa18.05■□□□□ 0.48
LINC00564-201ENST00000567258 ADAMTS12P58397 1594 aa18.04■□□□□ 0.48
LINC00564-201ENST00000567258 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
LINC00564-201ENST00000567258 GRIN2AQ12879 1464 aa18.02■□□□□ 0.48
LINC00564-201ENST00000567258 FHAD1B1AJZ9 1412 aa18■□□□□ 0.47
LINC00564-201ENST00000567258 SLC4A1APQ9BWU0 796 aaKnown RBP18■□□□□ 0.47
LINC00564-201ENST00000567258 FOXD4L1Q9NU39 408 aa17.96■□□□□ 0.47
LINC00564-201ENST00000567258 ATF5Q9Y2D1 282 aaPredicted RBP17.95■□□□□ 0.46
LINC00564-201ENST00000567258 CEP170Q5SW79 1584 aa17.93■□□□□ 0.46
LINC00564-201ENST00000567258 NUP160Q12769 1436 aa17.91■□□□□ 0.46
LINC00564-201ENST00000567258 KIF27Q86VH2 1401 aa17.88■□□□□ 0.45
LINC00564-201ENST00000567258 SHROOM2Q13796 1616 aa17.86■□□□□ 0.45
LINC00564-201ENST00000567258 CUL7Q14999 1698 aa17.85■□□□□ 0.45
LINC00564-201ENST00000567258 ZBTB12Q9Y330 459 aaPredicted RBP17.82■□□□□ 0.44
LINC00564-201ENST00000567258 ERCC6L2Q5T890 1561 aa17.82■□□□□ 0.44
LINC00564-201ENST00000567258 AKT1S1Q96B36 256 aa17.81■□□□□ 0.44
LINC00564-201ENST00000567258 JPH4Q96JJ6 628 aa17.79■□□□□ 0.44
LINC00564-201ENST00000567258 PRG4Q92954 1404 aaPredicted RBP17.79■□□□□ 0.44
LINC00564-201ENST00000567258 IGF1RP08069 1367 aa17.78■□□□□ 0.44
LINC00564-201ENST00000567258 RUSC2Q8N2Y8 1516 aa17.77■□□□□ 0.44
LINC00564-201ENST00000567258 CARMIL1Q5VZK9 1371 aa17.71■□□□□ 0.43
LINC00564-201ENST00000567258 KIAA0586Q9BVV6 1533 aa17.71■□□□□ 0.43
LINC00564-201ENST00000567258 NPM1P06748 294 aaKnown RBP eCLIP17.67■□□□□ 0.42
LINC00564-201ENST00000567258 REM2Q8IYK8 340 aaPredicted RBP17.66■□□□□ 0.42
LINC00564-201ENST00000567258 CARMIL2Q6F5E8 1435 aa17.61■□□□□ 0.41
LINC00564-201ENST00000567258 ZBTB22O15209 634 aa17.6■□□□□ 0.41
LINC00564-201ENST00000567258 IQGAP2Q13576 1575 aa17.6■□□□□ 0.41
LINC00564-201ENST00000567258 RAPGEF2Q9Y4G8 1499 aa17.58■□□□□ 0.41
LINC00564-201ENST00000567258 TTBK1Q5TCY1 1321 aaPredicted RBP17.57■□□□□ 0.4
LINC00564-201ENST00000567258 KIF13AQ9H1H9 1805 aa17.57■□□□□ 0.4
LINC00564-201ENST00000567258 ADCY10Q96PN6 1610 aa17.55■□□□□ 0.4
LINC00564-201ENST00000567258 PIP4P2Q8N4L2 257 aa17.55■□□□□ 0.4
LINC00564-201ENST00000567258 SP7Q8TDD2 431 aaPredicted RBP17.55■□□□□ 0.4
LINC00564-201ENST00000567258 PTPRGP23470 1445 aa17.55■□□□□ 0.4
LINC00564-201ENST00000567258 TNIKQ9UKE5 1360 aa17.52■□□□□ 0.39
LINC00564-201ENST00000567258 CTTNBP2Q8WZ74 1663 aa17.52■□□□□ 0.39
LINC00564-201ENST00000567258 MAPKBP1O60336 1514 aa17.51■□□□□ 0.39
LINC00564-201ENST00000567258 FAM69CQ0P6D2 419 aa17.49■□□□□ 0.39
LINC00564-201ENST00000567258 PITPNM1O00562 1244 aa17.47■□□□□ 0.39
LINC00564-201ENST00000567258 ABCC10Q5T3U5 1492 aa17.46■□□□□ 0.39
LINC00564-201ENST00000567258 UGGT2Q9NYU1 1516 aa17.44■□□□□ 0.38
LINC00564-201ENST00000567258 TSPOAP1O95153 1857 aa17.44■□□□□ 0.38
LINC00564-201ENST00000567258 DIP2BQ9P265 1576 aa17.43■□□□□ 0.38
LINC00564-201ENST00000567258 DISP1Q96F81 1524 aa17.42■□□□□ 0.38
LINC00564-201ENST00000567258 KIAA0556O60303 1618 aa17.41■□□□□ 0.38
LINC00564-201ENST00000567258 ATXN8OSP0DMR3 200 aa17.41■□□□□ 0.38
LINC00564-201ENST00000567258 FAM9AQ8IZU1 332 aaPredicted RBP17.41■□□□□ 0.38
LINC00564-201ENST00000567258 ABCC2Q92887 1545 aa17.41■□□□□ 0.38
LINC00564-201ENST00000567258 UACAQ9BZF9 1416 aa17.4■□□□□ 0.38
LINC00564-201ENST00000567258 GOLGA3Q08378 1498 aa17.4■□□□□ 0.38
LINC00564-201ENST00000567258 UHRF1BP1LA0JNW5 1464 aa17.38■□□□□ 0.37
LINC00564-201ENST00000567258 FXR2P51116 673 aaKnown RBP eCLIP17.38■□□□□ 0.37
LINC00564-201ENST00000567258 PRXQ9BXM0 1461 aa17.37■□□□□ 0.37
LINC00564-201ENST00000567258 PLB1Q6P1J6 1458 aa17.36■□□□□ 0.37
LINC00564-201ENST00000567258 HAX1O00165 279 aa17.35■□□□□ 0.37
LINC00564-201ENST00000567258 CSRNP3Q8WYN3 585 aa17.35■□□□□ 0.37
LINC00564-201ENST00000567258 ASXL2Q76L83 1435 aa17.33■□□□□ 0.36
LINC00564-201ENST00000567258 EEA1Q15075 1411 aa17.32■□□□□ 0.36
LINC00564-201ENST00000567258 ZCCHC11Q5TAX3 1644 aaKnown RBP17.32■□□□□ 0.36
LINC00564-201ENST00000567258 KDM6BO15054 1643 aa17.31■□□□□ 0.36
LINC00564-201ENST00000567258 KDM5BQ9UGL1 1544 aa17.29■□□□□ 0.36
LINC00564-201ENST00000567258 GLI2P10070 1586 aa17.27■□□□□ 0.35
LINC00564-201ENST00000567258 SPDYE2BA6NHP3 402 aa17.26■□□□□ 0.35
LINC00564-201ENST00000567258 SPDYE6P0CI01 402 aa17.26■□□□□ 0.35
LINC00564-201ENST00000567258 SPDYE2Q495Y8 402 aa17.26■□□□□ 0.35
LINC00564-201ENST00000567258 P3H3Q8IVL6 736 aa17.22■□□□□ 0.35
LINC00564-201ENST00000567258 ABCA8O94911 1581 aa17.22■□□□□ 0.35
LINC00564-201ENST00000567258 EPRSP07814 1512 aaKnown RBP17.21■□□□□ 0.35
LINC00564-201ENST00000567258 WDR7Q9Y4E6 1490 aa17.2■□□□□ 0.34
LINC00564-201ENST00000567258 MAP3K4Q9Y6R4 1608 aa17.2■□□□□ 0.34
LINC00564-201ENST00000567258 PPRC1Q5VV67 1664 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms