RNA–Protein interactions for RNA: ENST00000566996.2

AC008870.1-201, humanhuman

TSL 2 BASIC

Gene AC008870.1, Length 3,009 nt, Biotype 3prime overlapping ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008870.1-201ENST00000566996 SLC4A2P04920 1241 aa14.07□□□□□ -0.16
AC008870.1-201ENST00000566996 UNC13AQ9UPW8 1703 aa14.06□□□□□ -0.16
AC008870.1-201ENST00000566996 SCAF1Q9H7N4 1312 aaKnown RBP14.05□□□□□ -0.16
AC008870.1-201ENST00000566996 DHX37Q8IY37 1157 aaKnown RBP14.04□□□□□ -0.16
AC008870.1-201ENST00000566996 ZNF428Q96B54 188 aa14.04□□□□□ -0.16
AC008870.1-201ENST00000566996 CCDC88BA6NC98 1476 aa14.04□□□□□ -0.16
AC008870.1-201ENST00000566996 RGL2O15211 777 aa14.01□□□□□ -0.17
AC008870.1-201ENST00000566996 CDK11BP21127 795 aaKnown RBP14.01□□□□□ -0.17
AC008870.1-201ENST00000566996 CDK11AQ9UQ88 783 aaPredicted RBP14.01□□□□□ -0.17
AC008870.1-201ENST00000566996 SAMD1Q6SPF0 538 aaPredicted RBP14□□□□□ -0.17
AC008870.1-201ENST00000566996 EIF4G1Q04637 1599 aaKnown RBP13.99□□□□□ -0.17
AC008870.1-201ENST00000566996 SOGA1O94964 1423 aa13.98□□□□□ -0.17
AC008870.1-201ENST00000566996 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
AC008870.1-201ENST00000566996 ECM2O94769 699 aaPredicted RBP13.97□□□□□ -0.17
AC008870.1-201ENST00000566996 TOP2AP11388 1531 aaKnown RBP13.96□□□□□ -0.17
AC008870.1-201ENST00000566996 CEP162Q5TB80 1403 aa13.95□□□□□ -0.18
AC008870.1-201ENST00000566996 DNAJC5Q9H3Z4 198 aa13.95□□□□□ -0.18
AC008870.1-201ENST00000566996 NEUROD2Q15784 382 aa13.94□□□□□ -0.18
AC008870.1-201ENST00000566996 ATF5Q9Y2D1 282 aaPredicted RBP13.94□□□□□ -0.18
AC008870.1-201ENST00000566996 SMARCA4P51532 1647 aa13.94□□□□□ -0.18
AC008870.1-201ENST00000566996 RUSC2Q8N2Y8 1516 aa13.92□□□□□ -0.18
AC008870.1-201ENST00000566996 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
AC008870.1-201ENST00000566996 BICRAQ9NZM4 1560 aa13.91□□□□□ -0.18
AC008870.1-201ENST00000566996 ZBTB7CA1YPR0 619 aa13.91□□□□□ -0.18
AC008870.1-201ENST00000566996 PDIA4P13667 645 aaKnown RBP13.9□□□□□ -0.18
AC008870.1-201ENST00000566996 CHGAP10645 457 aaKnown RBP13.9□□□□□ -0.18
AC008870.1-201ENST00000566996 PIAS4Q8N2W9 510 aaPredicted RBP13.9□□□□□ -0.18
AC008870.1-201ENST00000566996 DIEXFQ68CQ4 756 aaKnown RBP13.89□□□□□ -0.19
AC008870.1-201ENST00000566996 MAPK8IP2Q13387 824 aaPredicted RBP13.89□□□□□ -0.19
AC008870.1-201ENST00000566996 NEUROD1Q13562 356 aa13.86□□□□□ -0.19
AC008870.1-201ENST00000566996 TNIKQ9UKE5 1360 aa13.84□□□□□ -0.19
AC008870.1-201ENST00000566996 ACIN1Q9UKV3 1341 aaKnown RBP13.83□□□□□ -0.2
AC008870.1-201ENST00000566996 WRNQ14191 1432 aaPredicted RBP eCLIP13.83□□□□□ -0.2
AC008870.1-201ENST00000566996 ATXN8OSP0DMR3 200 aa13.82□□□□□ -0.2
AC008870.1-201ENST00000566996 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
AC008870.1-201ENST00000566996 ZMYND15Q9H091 742 aa13.8□□□□□ -0.2
AC008870.1-201ENST00000566996 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.2
AC008870.1-201ENST00000566996 FOXD4L5Q5VV16 416 aaPredicted RBP13.77□□□□□ -0.21
AC008870.1-201ENST00000566996 FOXD4L4Q8WXT5 416 aaPredicted RBP13.77□□□□□ -0.21
AC008870.1-201ENST00000566996 KCTD17Q8N5Z5 321 aa13.77□□□□□ -0.21
AC008870.1-201ENST00000566996 RAD21O60216 631 aa13.76□□□□□ -0.21
AC008870.1-201ENST00000566996 GOLGA3Q08378 1498 aa13.76□□□□□ -0.21
AC008870.1-201ENST00000566996 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
AC008870.1-201ENST00000566996 EEA1Q15075 1411 aa13.75□□□□□ -0.21
AC008870.1-201ENST00000566996 CENPBP07199 599 aaPredicted RBP13.74□□□□□ -0.21
AC008870.1-201ENST00000566996 APBB1O00213 710 aa13.74□□□□□ -0.21
AC008870.1-201ENST00000566996 LMOD2Q6P5Q4 547 aa13.73□□□□□ -0.21
AC008870.1-201ENST00000566996 MYCNP04198 464 aaPredicted RBP13.72□□□□□ -0.21
AC008870.1-201ENST00000566996 ZNF316A6NFI3 1004 aaPredicted RBP13.7□□□□□ -0.22
AC008870.1-201ENST00000566996 HSP90B1P14625 803 aaKnown RBP13.7□□□□□ -0.22
AC008870.1-201ENST00000566996 RBM25P49756 843 aaKnown RBP13.7□□□□□ -0.22
AC008870.1-201ENST00000566996 MTMR7Q9Y216 660 aa13.7□□□□□ -0.22
AC008870.1-201ENST00000566996 POLR3GLQ9BT43 218 aa13.68□□□□□ -0.22
AC008870.1-201ENST00000566996 SLC24A3Q9HC58 644 aa13.67□□□□□ -0.22
AC008870.1-201ENST00000566996 CLIP1P30622 1438 aa13.67□□□□□ -0.22
AC008870.1-201ENST00000566996 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
AC008870.1-201ENST00000566996 CEP164Q9UPV0 1460 aa13.65□□□□□ -0.22
AC008870.1-201ENST00000566996 SPDYE4A6NLX3 237 aa13.62□□□□□ -0.23
AC008870.1-201ENST00000566996 AEBP1Q8IUX7 1158 aa13.61□□□□□ -0.23
AC008870.1-201ENST00000566996 RAPGEF2Q9Y4G8 1499 aa13.6□□□□□ -0.23
AC008870.1-201ENST00000566996 BAZ1BQ9UIG0 1483 aaKnown RBP13.6□□□□□ -0.23
AC008870.1-201ENST00000566996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.59□□□□□ -0.23
AC008870.1-201ENST00000566996 MIER1Q8N108 512 aa13.59□□□□□ -0.23
AC008870.1-201ENST00000566996 UBE2Q2Q8WVN8 375 aa13.59□□□□□ -0.23
AC008870.1-201ENST00000566996 ATAD2BQ9ULI0 1458 aa13.58□□□□□ -0.24
AC008870.1-201ENST00000566996 VPS8Q8N3P4 1428 aa13.57□□□□□ -0.24
AC008870.1-201ENST00000566996 DNAJC5BQ9UF47 199 aa13.56□□□□□ -0.24
AC008870.1-201ENST00000566996 KIF21BO75037 1637 aa13.55□□□□□ -0.24
AC008870.1-201ENST00000566996 GPBP1L1Q9HC44 474 aaPredicted RBP13.55□□□□□ -0.24
AC008870.1-201ENST00000566996 RGS22Q8NE09 1264 aa13.53□□□□□ -0.24
AC008870.1-201ENST00000566996 PEG3Q9GZU2 1588 aa13.53□□□□□ -0.24
AC008870.1-201ENST00000566996 CCDC82Q8N4S0 544 aa13.51□□□□□ -0.25
AC008870.1-201ENST00000566996 BRD2P25440 801 aaKnown RBP13.5□□□□□ -0.25
AC008870.1-201ENST00000566996 IL27Q8NEV9 243 aa13.5□□□□□ -0.25
AC008870.1-201ENST00000566996 USP35Q9P2H5 1018 aa13.5□□□□□ -0.25
AC008870.1-201ENST00000566996 NKX1-1Q15270 411 aaPredicted RBP13.49□□□□□ -0.25
AC008870.1-201ENST00000566996 PUS7Q96PZ0 661 aaKnown RBP13.48□□□□□ -0.25
AC008870.1-201ENST00000566996 ITGAEP38570 1179 aa13.48□□□□□ -0.25
AC008870.1-201ENST00000566996 KANK4Q5T7N3 995 aaPredicted RBP13.46□□□□□ -0.25
AC008870.1-201ENST00000566996 HMGB1P09429 215 aaKnown RBP13.46□□□□□ -0.26
AC008870.1-201ENST00000566996 PDE4CQ08493 712 aa13.45□□□□□ -0.26
AC008870.1-201ENST00000566996 MKRN3Q13064 507 aaKnown RBP13.45□□□□□ -0.26
AC008870.1-201ENST00000566996 ZC3H15Q8WU90 426 aaKnown RBP13.44□□□□□ -0.26
AC008870.1-201ENST00000566996 TOP2BQ02880 1626 aa13.41□□□□□ -0.26
AC008870.1-201ENST00000566996 KCNV2Q8TDN2 545 aa13.39□□□□□ -0.27
AC008870.1-201ENST00000566996 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
AC008870.1-201ENST00000566996 IRX6P78412 446 aaPredicted RBP13.38□□□□□ -0.27
AC008870.1-201ENST00000566996 ARAP1Q96P48 1450 aa13.37□□□□□ -0.27
AC008870.1-201ENST00000566996 DHX57Q6P158 1386 aaKnown RBP13.37□□□□□ -0.27
AC008870.1-201ENST00000566996 MFAP1P55081 439 aaKnown RBP13.36□□□□□ -0.27
AC008870.1-201ENST00000566996 PROM2Q8N271 834 aa13.34□□□□□ -0.27
AC008870.1-201ENST00000566996 PRXQ9BXM0 1461 aa13.34□□□□□ -0.27
AC008870.1-201ENST00000566996 TMCO4Q5TGY1 634 aa13.33□□□□□ -0.28
AC008870.1-201ENST00000566996 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
AC008870.1-201ENST00000566996 GZF1Q9H116 711 aaPredicted RBP13.33□□□□□ -0.28
AC008870.1-201ENST00000566996 CC2D2AQ9P2K1 1620 aa13.32□□□□□ -0.28
AC008870.1-201ENST00000566996 ZNF692Q9BU19 519 aaPredicted RBP13.32□□□□□ -0.28
AC008870.1-201ENST00000566996 CUX1P39880 1505 aa13.32□□□□□ -0.28
AC008870.1-201ENST00000566996 NCAPD3P42695 1498 aa13.32□□□□□ -0.28
AC008870.1-201ENST00000566996 KIF27Q86VH2 1401 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms