RNA–Protein interactions for RNA: ENST00000566663.5

NAE1-216, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-216ENST00000566663 CCDC61Q9Y6R9 512 aa13.47□□□□□ -0.25
NAE1-216ENST00000566663 IFNLR1Q8IU57 520 aaPredicted RBP13.45□□□□□ -0.26
NAE1-216ENST00000566663 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
NAE1-216ENST00000566663 GALR2O43603 387 aaPredicted RBP13.4□□□□□ -0.26
NAE1-216ENST00000566663 KIF12Q96FN5 646 aa13.37□□□□□ -0.27
NAE1-216ENST00000566663 SPOCK2Q92563 424 aa13.35□□□□□ -0.27
NAE1-216ENST00000566663 MS4A3Q96HJ5 214 aa13.34□□□□□ -0.27
NAE1-216ENST00000566663 DCAF8Q5TAQ9 597 aa13.33□□□□□ -0.28
NAE1-216ENST00000566663 POTEIP0CG38 1075 aa13.31□□□□□ -0.28
NAE1-216ENST00000566663 MAP3K13O43283 966 aa13.3□□□□□ -0.28
NAE1-216ENST00000566663 DCBLD2Q96PD2 775 aa13.3□□□□□ -0.28
NAE1-216ENST00000566663 GSE1Q14687 1217 aa13.28□□□□□ -0.28
NAE1-216ENST00000566663 SGIP1Q9BQI5 828 aa13.24□□□□□ -0.29
NAE1-216ENST00000566663 PCDHB13Q9Y5F0 798 aa13.22□□□□□ -0.29
NAE1-216ENST00000566663 PYGBP11216 843 aa13.21□□□□□ -0.29
NAE1-216ENST00000566663 CIZ1Q9ULV3 898 aaPredicted RBP13.18□□□□□ -0.3
NAE1-216ENST00000566663 TRPC6Q9Y210 931 aa13.17□□□□□ -0.3
NAE1-216ENST00000566663 ASTLQ6HA08 431 aaPredicted RBP13.16□□□□□ -0.3
NAE1-216ENST00000566663 IFNL1Q8IU54 200 aa13.16□□□□□ -0.3
NAE1-216ENST00000566663 ATMINO43313 823 aaPredicted RBP13.15□□□□□ -0.3
NAE1-216ENST00000566663 CHRM1P11229 460 aaPredicted RBP13.15□□□□□ -0.3
NAE1-216ENST00000566663 TIE1P35590 1138 aa13.13□□□□□ -0.31
NAE1-216ENST00000566663 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
NAE1-216ENST00000566663 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
NAE1-216ENST00000566663 ATN1P54259 1190 aaPredicted RBP13.08□□□□□ -0.32
NAE1-216ENST00000566663 PCDHB8Q9UN66 801 aa13.08□□□□□ -0.32
NAE1-216ENST00000566663 TTLL13PA6NNM8 815 aa13.06□□□□□ -0.32
NAE1-216ENST00000566663 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
NAE1-216ENST00000566663 ZNF467Q7Z7K2 595 aaPredicted RBP13.05□□□□□ -0.32
NAE1-216ENST00000566663 TMEM106CQ9BVX2 250 aa13.02□□□□□ -0.33
NAE1-216ENST00000566663 SLC39A7Q92504 469 aa13.01□□□□□ -0.33
NAE1-216ENST00000566663 C7P10643 843 aa12.99□□□□□ -0.33
NAE1-216ENST00000566663 LHX8Q68G74 356 aa12.99□□□□□ -0.33
NAE1-216ENST00000566663 METRNQ9UJH8 293 aa12.99□□□□□ -0.33
NAE1-216ENST00000566663 TRIM35Q9UPQ4 493 aa12.97□□□□□ -0.33
NAE1-216ENST00000566663 PSEN1P49768 467 aa12.93□□□□□ -0.34
NAE1-216ENST00000566663 PDAP1Q13442 181 aaKnown RBP12.92□□□□□ -0.34
NAE1-216ENST00000566663 IER5LQ5T953 404 aa12.91□□□□□ -0.34
NAE1-216ENST00000566663 PKD2Q13563 968 aa12.88□□□□□ -0.35
NAE1-216ENST00000566663 RNF25Q96BH1 459 aaPredicted RBP12.88□□□□□ -0.35
NAE1-216ENST00000566663 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
NAE1-216ENST00000566663 POTEFA5A3E0 1075 aa12.86□□□□□ -0.35
NAE1-216ENST00000566663 RIOK3O14730 519 aaKnown RBP12.86□□□□□ -0.35
NAE1-216ENST00000566663 ECM2O94769 699 aaPredicted RBP12.84□□□□□ -0.35
NAE1-216ENST00000566663 COLQQ9Y215 455 aaPredicted RBP12.84□□□□□ -0.35
NAE1-216ENST00000566663 SEC24BO95487 1268 aa12.82□□□□□ -0.36
NAE1-216ENST00000566663 VGFO15240 615 aaPredicted RBP12.79□□□□□ -0.36
NAE1-216ENST00000566663 IRX5P78411 483 aaPredicted RBP12.79□□□□□ -0.36
NAE1-216ENST00000566663 POTEJP0CG39 1038 aa12.78□□□□□ -0.36
NAE1-216ENST00000566663 GOLGA2Q08379 1002 aa12.78□□□□□ -0.36
NAE1-216ENST00000566663 PLCG2P16885 1265 aa12.77□□□□□ -0.37
NAE1-216ENST00000566663 MKRN3Q13064 507 aaKnown RBP12.76□□□□□ -0.37
NAE1-216ENST00000566663 CABP2Q9NPB3 220 aa12.76□□□□□ -0.37
NAE1-216ENST00000566663 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.74□□□□□ -0.37
NAE1-216ENST00000566663 RGL2O15211 777 aa12.74□□□□□ -0.37
NAE1-216ENST00000566663 OTUD5Q96G74 571 aa12.74□□□□□ -0.37
NAE1-216ENST00000566663 ZFP91Q96JP5 570 aaPredicted RBP12.74□□□□□ -0.37
NAE1-216ENST00000566663 OCEL1Q9H607 264 aa12.74□□□□□ -0.37
NAE1-216ENST00000566663 TAOK2Q9UL54 1235 aa12.73□□□□□ -0.37
NAE1-216ENST00000566663 MAMSTRQ6ZN01 415 aa12.71□□□□□ -0.37
NAE1-216ENST00000566663 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.69□□□□□ -0.383e-9■■■□□ 16.3
NAE1-216ENST00000566663 PDCD7Q8N8D1 485 aaKnown RBP12.68□□□□□ -0.38
NAE1-216ENST00000566663 ILDR1Q86SU0 546 aaPredicted RBP12.67□□□□□ -0.38
NAE1-216ENST00000566663 EFCAB3Q8N7B9 438 aa12.66□□□□□ -0.38
NAE1-216ENST00000566663 SCUBE2Q9NQ36 999 aa12.65□□□□□ -0.38
NAE1-216ENST00000566663 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
NAE1-216ENST00000566663 STK25O00506 426 aa12.6□□□□□ -0.39
NAE1-216ENST00000566663 STK24Q9Y6E0 443 aa12.6□□□□□ -0.39
NAE1-216ENST00000566663 SOX12O15370 315 aa12.57□□□□□ -0.4
NAE1-216ENST00000566663 DPY19L2Q6NUT2 758 aa12.56□□□□□ -0.4
NAE1-216ENST00000566663 L3MBTL3Q96JM7 780 aaPredicted RBP12.55□□□□□ -0.4
NAE1-216ENST00000566663 PHF8Q9UPP1 1060 aa12.52□□□□□ -0.41
NAE1-216ENST00000566663 HS6ST3Q8IZP7 471 aa12.49□□□□□ -0.41
NAE1-216ENST00000566663 MS4A4AQ96JQ5 239 aa12.49□□□□□ -0.41
NAE1-216ENST00000566663 NLRP6P59044 892 aa12.48□□□□□ -0.41
NAE1-216ENST00000566663 SLAIN1Q8ND83 568 aa12.48□□□□□ -0.41
NAE1-216ENST00000566663 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.48□□□□□ -0.41
NAE1-216ENST00000566663 BOLA1Q9Y3E2 137 aa12.48□□□□□ -0.41
NAE1-216ENST00000566663 C3orf67Q6ZVT6 689 aa12.47□□□□□ -0.41
NAE1-216ENST00000566663 FBXO22Q8NEZ5 403 aa12.47□□□□□ -0.41
NAE1-216ENST00000566663 MFRPQ9BY79 579 aa12.46□□□□□ -0.41
NAE1-216ENST00000566663 G3V3G9 751 aa12.45□□□□□ -0.42
NAE1-216ENST00000566663 CHGAP10645 457 aaKnown RBP12.45□□□□□ -0.42
NAE1-216ENST00000566663 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
NAE1-216ENST00000566663 AMER1Q5JTC6 1135 aaPredicted RBP12.41□□□□□ -0.42
NAE1-216ENST00000566663 MICALL2Q8IY33 904 aa12.39□□□□□ -0.43
NAE1-216ENST00000566663 DNAJC5Q9H3Z4 198 aa12.36□□□□□ -0.43
NAE1-216ENST00000566663 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
NAE1-216ENST00000566663 DCAF8L2P0C7V8 631 aa12.34□□□□□ -0.43
NAE1-216ENST00000566663 NKX1-1Q15270 411 aaPredicted RBP12.31□□□□□ -0.44
NAE1-216ENST00000566663 FAM163AQ96GL9 167 aaPredicted RBP12.31□□□□□ -0.44
NAE1-216ENST00000566663 LCE2DQ5TA82 110 aaPredicted RBP12.3□□□□□ -0.44
NAE1-216ENST00000566663 SNPHO15079 494 aa12.27□□□□□ -0.45
NAE1-216ENST00000566663 PPP1R37O75864 691 aa12.27□□□□□ -0.45
NAE1-216ENST00000566663 TMEM92Q6UXU6 159 aa12.27□□□□□ -0.45
NAE1-216ENST00000566663 RYDENQ9NUL5 291 aaKnown RBP12.22□□□□□ -0.45
NAE1-216ENST00000566663 ST18O60284 1047 aa12.21□□□□□ -0.45
NAE1-216ENST00000566663 POTEGQ6S5H5 508 aa12.2□□□□□ -0.46
NAE1-216ENST00000566663 POTEMA6NI47 508 aa12.19□□□□□ -0.46
NAE1-216ENST00000566663 HOXB3P14651 431 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms