RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 NPM1P06748 294 aaKnown RBP eCLIP36.03■■■■□ 3.36
PDXDC1-213ENST00000566426 FAM69CQ0P6D2 419 aa35.96■■■■□ 3.35
PDXDC1-213ENST00000566426 RUSC2Q8N2Y8 1516 aa35.92■■■■□ 3.34
PDXDC1-213ENST00000566426 ABCC10Q5T3U5 1492 aa35.92■■■■□ 3.34
PDXDC1-213ENST00000566426 MAPKBP1O60336 1514 aa35.86■■■■□ 3.33
PDXDC1-213ENST00000566426 KIAA0586Q9BVV6 1533 aa35.78■■■■□ 3.32
PDXDC1-213ENST00000566426 ADCY10Q96PN6 1610 aa35.75■■■■□ 3.31
PDXDC1-213ENST00000566426 DIP2BQ9P265 1576 aa35.75■■■■□ 3.31
PDXDC1-213ENST00000566426 IGF1RP08069 1367 aa35.72■■■■□ 3.31
PDXDC1-213ENST00000566426 KIF27Q86VH2 1401 aa35.69■■■■□ 3.3
PDXDC1-213ENST00000566426 CUL7Q14999 1698 aa35.64■■■■□ 3.3
PDXDC1-213ENST00000566426 KDM6BO15054 1643 aa35.61■■■■□ 3.29
PDXDC1-213ENST00000566426 PTPRGP23470 1445 aa35.57■■■■□ 3.29
PDXDC1-213ENST00000566426 TSPOAP1O95153 1857 aa35.52■■■■□ 3.28
PDXDC1-213ENST00000566426 KDM4FA0A1W2PPD8 638 aa35.5■■■■□ 3.27
PDXDC1-213ENST00000566426 CARMIL1Q5VZK9 1371 aa35.5■■■■□ 3.27
PDXDC1-213ENST00000566426 CARMIL2Q6F5E8 1435 aa35.49■■■■□ 3.27
PDXDC1-213ENST00000566426 TTBK1Q5TCY1 1321 aaPredicted RBP35.48■■■■□ 3.27
PDXDC1-213ENST00000566426 TNIKQ9UKE5 1360 aa35.46■■■■□ 3.27
PDXDC1-213ENST00000566426 ABCC2Q92887 1545 aa35.42■■■■□ 3.26
PDXDC1-213ENST00000566426 PLB1Q6P1J6 1458 aa35.37■■■■□ 3.25
PDXDC1-213ENST00000566426 ASXL2Q76L83 1435 aa35.34■■■■□ 3.25
PDXDC1-213ENST00000566426 IQGAP2Q13576 1575 aa35.32■■■■□ 3.24
PDXDC1-213ENST00000566426 UHRF1BP1LA0JNW5 1464 aa35.3■■■■□ 3.24
PDXDC1-213ENST00000566426 GLI2P10070 1586 aa35.3■■■■□ 3.24
PDXDC1-213ENST00000566426 UACAQ9BZF9 1416 aa35.27■■■■□ 3.24
PDXDC1-213ENST00000566426 PPRC1Q5VV67 1664 aaKnown RBP35.18■■■■□ 3.22
PDXDC1-213ENST00000566426 DISP1Q96F81 1524 aa35.17■■■■□ 3.22
PDXDC1-213ENST00000566426 KDM5BQ9UGL1 1544 aa35.12■■■■□ 3.21
PDXDC1-213ENST00000566426 EPRSP07814 1512 aaKnown RBP35.11■■■■□ 3.21
PDXDC1-213ENST00000566426 RAPGEF2Q9Y4G8 1499 aa35.09■■■■□ 3.21
PDXDC1-213ENST00000566426 UGGT2Q9NYU1 1516 aa35.09■■■■□ 3.21
PDXDC1-213ENST00000566426 TEX14Q8IWB6 1497 aa35.09■■■■□ 3.21
PDXDC1-213ENST00000566426 ADGRL1O94910 1474 aa35.08■■■■□ 3.21
PDXDC1-213ENST00000566426 MAP3K4Q9Y6R4 1608 aa35.04■■■■□ 3.2
PDXDC1-213ENST00000566426 COL17A1Q9UMD9 1497 aaPredicted RBP35.03■■■■□ 3.2
PDXDC1-213ENST00000566426 ZCCHC11Q5TAX3 1644 aaKnown RBP35■■■■□ 3.19
PDXDC1-213ENST00000566426 KIAA0556O60303 1618 aa34.99■■■■□ 3.19
PDXDC1-213ENST00000566426 ILDR1Q86SU0 546 aaPredicted RBP34.96■■■■□ 3.19
PDXDC1-213ENST00000566426 WDR7Q9Y4E6 1490 aa34.91■■■■□ 3.18
PDXDC1-213ENST00000566426 GOLGA3Q08378 1498 aa34.83■■■■□ 3.17
PDXDC1-213ENST00000566426 CD109Q6YHK3 1445 aa34.8■■■■□ 3.16
PDXDC1-213ENST00000566426 KCNH8Q96L42 1107 aa34.78■■■■□ 3.16
PDXDC1-213ENST00000566426 MAGI3Q5TCQ9 1506 aa34.76■■■■□ 3.16
PDXDC1-213ENST00000566426 CTTNBP2Q8WZ74 1663 aa34.75■■■■□ 3.15
PDXDC1-213ENST00000566426 HECW2Q9P2P5 1572 aa34.73■■■■□ 3.15
PDXDC1-213ENST00000566426 CFAP43Q8NDM7 1665 aa34.73■■■■□ 3.15
PDXDC1-213ENST00000566426 FAM9AQ8IZU1 332 aaPredicted RBP34.71■■■■□ 3.15
PDXDC1-213ENST00000566426 ABCA8O94911 1581 aa34.7■■■■□ 3.15
PDXDC1-213ENST00000566426 PRXQ9BXM0 1461 aa34.57■■■■□ 3.12
PDXDC1-213ENST00000566426 ARAP3Q8WWN8 1544 aa34.51■■■■□ 3.12
PDXDC1-213ENST00000566426 PHLDB1Q86UU1 1377 aa34.48■■■■□ 3.11
PDXDC1-213ENST00000566426 ARID3CA6NKF2 412 aa34.47■■■■□ 3.11
PDXDC1-213ENST00000566426 KIF21BO75037 1637 aa34.46■■■■□ 3.11
PDXDC1-213ENST00000566426 ATP10BO94823 1461 aa34.46■■■■□ 3.11
PDXDC1-213ENST00000566426 P3H3Q8IVL6 736 aa34.45■■■■□ 3.11
PDXDC1-213ENST00000566426 ABCA9Q8IUA7 1624 aa34.35■■■■□ 3.09
PDXDC1-213ENST00000566426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.31■■■■□ 3.08
PDXDC1-213ENST00000566426 HNRNPUL2Q1KMD3 747 aaKnown RBP34.31■■■■□ 3.08
PDXDC1-213ENST00000566426 RAPGEF3O95398 923 aa34.3■■■■□ 3.08
PDXDC1-213ENST00000566426 NEO1Q92859 1461 aa34.3■■■■□ 3.08
PDXDC1-213ENST00000566426 PTPRMP28827 1452 aa34.27■■■■□ 3.08
PDXDC1-213ENST00000566426 CSRNP3Q8WYN3 585 aa34.25■■■■□ 3.07
PDXDC1-213ENST00000566426 SAMD9Q5K651 1589 aa34.24■■■■□ 3.07
PDXDC1-213ENST00000566426 RAPGEF6Q8TEU7 1601 aa34.24■■■■□ 3.07
PDXDC1-213ENST00000566426 ADAMTSL3P82987 1691 aa34.24■■■■□ 3.07
PDXDC1-213ENST00000566426 FBXO41Q8TF61 875 aa34.23■■■■□ 3.07
PDXDC1-213ENST00000566426 ARID4BQ4LE39 1312 aaPredicted RBP34.21■■■■□ 3.07
PDXDC1-213ENST00000566426 PLEKHD1A6NEE1 506 aa34.12■■■■□ 3.05
PDXDC1-213ENST00000566426 BCORL1Q5H9F3 1711 aa34.12■■■■□ 3.05
PDXDC1-213ENST00000566426 NUP153P49790 1475 aaKnown RBP34.12■■■■□ 3.05
PDXDC1-213ENST00000566426 FRMPD1Q5SYB0 1578 aa34.09■■■■□ 3.05
PDXDC1-213ENST00000566426 RANGAP1P46060 587 aaPredicted RBP34.07■■■■□ 3.04
PDXDC1-213ENST00000566426 DENND4BO75064 1496 aaPredicted RBP34.06■■■■□ 3.04
PDXDC1-213ENST00000566426 MADDQ8WXG6 1647 aa34.05■■■■□ 3.04
PDXDC1-213ENST00000566426 PCF11O94913 1555 aaKnown RBP34.02■■■■□ 3.04
PDXDC1-213ENST00000566426 FHOD3Q2V2M9 1422 aa34.02■■■■□ 3.04
PDXDC1-213ENST00000566426 EEA1Q15075 1411 aa34.01■■■■□ 3.03
PDXDC1-213ENST00000566426 AKNAQ7Z591 1439 aa34.01■■■■□ 3.03
PDXDC1-213ENST00000566426 ARHGEF40Q8TER5 1519 aa33.99■■■■□ 3.03
PDXDC1-213ENST00000566426 FANCAO15360 1455 aa33.97■■■■□ 3.03
PDXDC1-213ENST00000566426 LMTK3Q96Q04 1460 aa33.96■■■■□ 3.03
PDXDC1-213ENST00000566426 CFAP74Q9C0B2 1584 aa33.96■■■■□ 3.03
PDXDC1-213ENST00000566426 POGZQ7Z3K3 1410 aa33.96■■■■□ 3.03
PDXDC1-213ENST00000566426 RICTORQ6R327 1708 aa33.94■■■■□ 3.02
PDXDC1-213ENST00000566426 RIMS1Q86UR5 1692 aaKnown RBP33.91■■■■□ 3.02
PDXDC1-213ENST00000566426 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.9■■■■□ 3.022e-7■■■■■ 47.7
PDXDC1-213ENST00000566426 EFCAB5A4FU69 1503 aa33.85■■■■□ 3.01
PDXDC1-213ENST00000566426 ZMYM4Q5VZL5 1548 aa33.85■■■■□ 3.01
PDXDC1-213ENST00000566426 MAGI2Q86UL8 1455 aa33.85■■■■□ 3.01
PDXDC1-213ENST00000566426 PLPPR3Q6T4P5 718 aa33.83■■■■□ 3.01
PDXDC1-213ENST00000566426 ZFYVE16Q7Z3T8 1539 aa33.83■■■■□ 3.01
PDXDC1-213ENST00000566426 TTC37Q6PGP7 1564 aa33.81■■■■□ 3
PDXDC1-213ENST00000566426 HSPA2P54652 639 aa33.81■■■■□ 3
PDXDC1-213ENST00000566426 YEATS2Q9ULM3 1422 aa33.79■■■■□ 3
PDXDC1-213ENST00000566426 MLECQ14165 292 aa33.76■■■□□ 2.99
PDXDC1-213ENST00000566426 PLCH2O75038 1416 aa33.75■■■□□ 2.99
PDXDC1-213ENST00000566426 SCAPERQ9BY12 1400 aa33.75■■■□□ 2.99
PDXDC1-213ENST00000566426 HECW1Q76N89 1606 aa33.72■■■□□ 2.99
PDXDC1-213ENST00000566426 CDK13Q14004 1512 aaKnown RBP33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms