RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-233ENST00000566376 ZNF692Q9BU19 519 aaPredicted RBP12.65□□□□□ -0.38
TCF4-233ENST00000566376 BAZ1BQ9UIG0 1483 aaKnown RBP12.62□□□□□ -0.39
TCF4-233ENST00000566376 ZBTB22O15209 634 aa12.62□□□□□ -0.39
TCF4-233ENST00000566376 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
TCF4-233ENST00000566376 KIF21AQ7Z4S6 1674 aa12.61□□□□□ -0.39
TCF4-233ENST00000566376 POTEMA6NI47 508 aa12.61□□□□□ -0.39
TCF4-233ENST00000566376 NESP48681 1621 aa12.6□□□□□ -0.39
TCF4-233ENST00000566376 THOC2Q8NI27 1593 aaKnown RBP12.58□□□□□ -0.4
TCF4-233ENST00000566376 POTEGQ6S5H5 508 aa12.55□□□□□ -0.4
TCF4-233ENST00000566376 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.4
TCF4-233ENST00000566376 CLCN6P51797 869 aa12.52□□□□□ -0.41
TCF4-233ENST00000566376 SSUH2Q9Y2M2 353 aa12.52□□□□□ -0.41
TCF4-233ENST00000566376 PRDM2Q13029 1718 aa12.51□□□□□ -0.41
TCF4-233ENST00000566376 OTUD5Q96G74 571 aa12.51□□□□□ -0.41
TCF4-233ENST00000566376 RSF1Q96T23 1441 aaPredicted RBP12.47□□□□□ -0.41
TCF4-233ENST00000566376 FARP1Q9Y4F1 1045 aaPredicted RBP12.47□□□□□ -0.41
TCF4-233ENST00000566376 TOP2AP11388 1531 aaKnown RBP12.47□□□□□ -0.41
TCF4-233ENST00000566376 CUX2O14529 1486 aa12.42□□□□□ -0.42
TCF4-233ENST00000566376 ATXN8OSP0DMR3 200 aa12.42□□□□□ -0.42
TCF4-233ENST00000566376 MKRN4PQ13434 485 aaPredicted RBP12.41□□□□□ -0.42
TCF4-233ENST00000566376 ERCC6Q03468 1493 aa12.4□□□□□ -0.42
TCF4-233ENST00000566376 POTEB2H3BUK9 544 aa12.38□□□□□ -0.43
TCF4-233ENST00000566376 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
TCF4-233ENST00000566376 PCDH10Q9P2E7 1040 aa12.36□□□□□ -0.43
TCF4-233ENST00000566376 WDR62O43379 1518 aa12.33□□□□□ -0.44
TCF4-233ENST00000566376 ZNF579Q8NAF0 562 aaKnown RBP12.32□□□□□ -0.44
TCF4-233ENST00000566376 GALR2O43603 387 aaPredicted RBP12.31□□□□□ -0.44
TCF4-233ENST00000566376 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
TCF4-233ENST00000566376 CFTRP13569 1480 aa12.3□□□□□ -0.44
TCF4-233ENST00000566376 MRC2Q9UBG0 1479 aa12.27□□□□□ -0.45
TCF4-233ENST00000566376 PDS5BQ9NTI5 1447 aa12.25□□□□□ -0.45
TCF4-233ENST00000566376 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
TCF4-233ENST00000566376 FANCD2Q9BXW9 1451 aa12.24□□□□□ -0.45
TCF4-233ENST00000566376 CEP164Q9UPV0 1460 aa12.23□□□□□ -0.45
TCF4-233ENST00000566376 URB2Q14146 1524 aaKnown RBP12.22□□□□□ -0.45
TCF4-233ENST00000566376 FAM163AQ96GL9 167 aaPredicted RBP12.19□□□□□ -0.46
TCF4-233ENST00000566376 PELP1Q8IZL8 1130 aaKnown RBP12.13□□□□□ -0.47
TCF4-233ENST00000566376 PHF12Q96QT6 1004 aa12.1□□□□□ -0.47
TCF4-233ENST00000566376 TARBP1Q13395 1621 aaKnown RBP12.09□□□□□ -0.47
TCF4-233ENST00000566376 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
TCF4-233ENST00000566376 DNAJC5Q9H3Z4 198 aa12.09□□□□□ -0.47
TCF4-233ENST00000566376 DNMBPQ6XZF7 1577 aa12.09□□□□□ -0.47
TCF4-233ENST00000566376 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
TCF4-233ENST00000566376 TOPBP1Q92547 1522 aa12.08□□□□□ -0.48
TCF4-233ENST00000566376 METRNQ9UJH8 293 aa12.08□□□□□ -0.48
TCF4-233ENST00000566376 EIF4G3O43432 1585 aaKnown RBP12.06□□□□□ -0.48
TCF4-233ENST00000566376 MAMSTRQ6ZN01 415 aa12.06□□□□□ -0.48
TCF4-233ENST00000566376 LCE2DQ5TA82 110 aaPredicted RBP12.04□□□□□ -0.48
TCF4-233ENST00000566376 POTEJP0CG39 1038 aa12.03□□□□□ -0.48
TCF4-233ENST00000566376 ZNF608Q9ULD9 1512 aaPredicted RBP12.02□□□□□ -0.48
TCF4-233ENST00000566376 CREBZFQ9NS37 354 aa12.02□□□□□ -0.49
TCF4-233ENST00000566376 CHD1O14646 1710 aa12.02□□□□□ -0.49
TCF4-233ENST00000566376 SLC39A7Q92504 469 aa11.99□□□□□ -0.49
TCF4-233ENST00000566376 CUX1P39880 1505 aa11.99□□□□□ -0.49
TCF4-233ENST00000566376 C7P10643 843 aa11.98□□□□□ -0.49
TCF4-233ENST00000566376 SCUBE2Q9NQ36 999 aa11.98□□□□□ -0.49
TCF4-233ENST00000566376 POLA1P09884 1462 aaPredicted RBP11.97□□□□□ -0.49
TCF4-233ENST00000566376 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
TCF4-233ENST00000566376 PBRM1Q86U86 1689 aa11.95□□□□□ -0.5
TCF4-233ENST00000566376 CDAN1Q8IWY9 1227 aa11.94□□□□□ -0.5
TCF4-233ENST00000566376 BIVM-ERCC5R4GMW8 1640 aa11.93□□□□□ -0.5
TCF4-233ENST00000566376 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
TCF4-233ENST00000566376 FGD5Q6ZNL6 1462 aa11.91□□□□□ -0.5
TCF4-233ENST00000566376 ATMINO43313 823 aaPredicted RBP11.91□□□□□ -0.5
TCF4-233ENST00000566376 ASTLQ6HA08 431 aaPredicted RBP11.91□□□□□ -0.5
TCF4-233ENST00000566376 ABCA5Q8WWZ7 1642 aa11.89□□□□□ -0.51
TCF4-233ENST00000566376 RAD54L2Q9Y4B4 1467 aa11.89□□□□□ -0.51
TCF4-233ENST00000566376 SYNJ1O43426 1573 aa11.89□□□□□ -0.51
TCF4-233ENST00000566376 MS4A3Q96HJ5 214 aa11.88□□□□□ -0.51
TCF4-233ENST00000566376 RIMBP3CA6NJZ7 1639 aa11.86□□□□□ -0.51
TCF4-233ENST00000566376 RIMBP3BA6NNM3 1639 aa11.86□□□□□ -0.51
TCF4-233ENST00000566376 RIMBP3Q9UFD9 1639 aa11.86□□□□□ -0.51
TCF4-233ENST00000566376 TOP2BQ02880 1626 aa11.85□□□□□ -0.51
TCF4-233ENST00000566376 AQRO60306 1485 aaKnown RBP eCLIP11.84□□□□□ -0.51
TCF4-233ENST00000566376 STAG3Q9UJ98 1225 aa11.84□□□□□ -0.51
TCF4-233ENST00000566376 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
TCF4-233ENST00000566376 SUPT5HO00267 1087 aaKnown RBP11.8□□□□□ -0.52
TCF4-233ENST00000566376 CLASP1Q7Z460 1538 aa11.8□□□□□ -0.52
TCF4-233ENST00000566376 SNAPC4Q5SXM2 1469 aa11.78□□□□□ -0.52
TCF4-233ENST00000566376 ABCA10Q8WWZ4 1543 aa11.78□□□□□ -0.52
TCF4-233ENST00000566376 ATN1P54259 1190 aaPredicted RBP11.77□□□□□ -0.53
TCF4-233ENST00000566376 SOGA1O94964 1423 aa11.77□□□□□ -0.53
TCF4-233ENST00000566376 ARHGEF11O15085 1522 aa11.76□□□□□ -0.53
TCF4-233ENST00000566376 ADAMTS12P58397 1594 aa11.76□□□□□ -0.53
TCF4-233ENST00000566376 TDRD9Q8NDG6 1382 aaKnown RBP11.74□□□□□ -0.53
TCF4-233ENST00000566376 MAGI1Q96QZ7 1491 aaPredicted RBP11.72□□□□□ -0.53
TCF4-233ENST00000566376 GRIN2BQ13224 1484 aa11.7□□□□□ -0.54
TCF4-233ENST00000566376 WRNQ14191 1432 aaPredicted RBP eCLIP11.7□□□□□ -0.54
TCF4-233ENST00000566376 MMRN1Q13201 1228 aa11.7□□□□□ -0.54
TCF4-233ENST00000566376 GAPVD1Q14C86 1478 aa11.7□□□□□ -0.54
TCF4-233ENST00000566376 CEP170Q5SW79 1584 aa11.69□□□□□ -0.54
TCF4-233ENST00000566376 POTEFA5A3E0 1075 aa11.68□□□□□ -0.54
TCF4-233ENST00000566376 ARAP1Q96P48 1450 aa11.68□□□□□ -0.54
TCF4-233ENST00000566376 SYNJ2O15056 1496 aa11.67□□□□□ -0.54
TCF4-233ENST00000566376 FKBP8Q14318 412 aa11.66□□□□□ -0.54
TCF4-233ENST00000566376 TSPYL2Q9H2G4 693 aaPredicted RBP11.66□□□□□ -0.54
TCF4-233ENST00000566376 SHROOM2Q13796 1616 aa11.66□□□□□ -0.54
TCF4-233ENST00000566376 ERCC6L2Q5T890 1561 aa11.65□□□□□ -0.54
TCF4-233ENST00000566376 SEC24BO95487 1268 aa11.64□□□□□ -0.55
TCF4-233ENST00000566376 SPNS2Q8IVW8 549 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms