RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 EIF4G1Q04637 1599 aaKnown RBP8.85□□□□□ -0.99
LINC01043-201ENST00000565936 SCAF1Q9H7N4 1312 aaKnown RBP8.85□□□□□ -0.99
LINC01043-201ENST00000565936 TNIKQ9UKE5 1360 aa8.84□□□□□ -0.99
LINC01043-201ENST00000565936 SOGA1O94964 1423 aa8.83□□□□□ -1
LINC01043-201ENST00000565936 KANK1Q14678 1352 aa8.83□□□□□ -1
LINC01043-201ENST00000565936 CEP162Q5TB80 1403 aa8.82□□□□□ -1
LINC01043-201ENST00000565936 KDM2AQ9Y2K7 1162 aa8.82□□□□□ -1
LINC01043-201ENST00000565936 CDCA8Q53HL2 280 aa8.82□□□□□ -1
LINC01043-201ENST00000565936 CCNB3Q8WWL7 1395 aa8.82□□□□□ -1
LINC01043-201ENST00000565936 NPM2Q86SE8 214 aaKnown RBP8.82□□□□□ -1
LINC01043-201ENST00000565936 CADPSQ9ULU8 1353 aa8.82□□□□□ -1
LINC01043-201ENST00000565936 RRP7BPQ9NSQ0 103 aa8.81□□□□□ -1
LINC01043-201ENST00000565936 HAP1P54257 671 aaPredicted RBP8.81□□□□□ -1
LINC01043-201ENST00000565936 ABCC8Q09428 1581 aa8.8□□□□□ -1
LINC01043-201ENST00000565936 CCDC88BA6NC98 1476 aa8.8□□□□□ -1
LINC01043-201ENST00000565936 MROH2BQ7Z745 1585 aa8.79□□□□□ -1
LINC01043-201ENST00000565936 TOP2AP11388 1531 aaKnown RBP8.79□□□□□ -1
LINC01043-201ENST00000565936 WDR43Q15061 677 aaKnown RBP eCLIP8.79□□□□□ -1
LINC01043-201ENST00000565936 TMC1Q8TDI8 760 aa8.76□□□□□ -1.01
LINC01043-201ENST00000565936 RTL5Q5HYW3 569 aaPredicted RBP8.76□□□□□ -1.01
LINC01043-201ENST00000565936 EIF4G2P78344 907 aaKnown RBP eCLIP8.75□□□□□ -1.01
LINC01043-201ENST00000565936 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.75□□□□□ -1.01
LINC01043-201ENST00000565936 ATAD2BQ9ULI0 1458 aa8.75□□□□□ -1.01
LINC01043-201ENST00000565936 CFAP53Q96M91 514 aa8.73□□□□□ -1.01
LINC01043-201ENST00000565936 FMN1Q68DA7 1419 aa8.73□□□□□ -1.01
LINC01043-201ENST00000565936 A0A0G2JS52 829 aa8.73□□□□□ -1.01
LINC01043-201ENST00000565936 EFCAB2Q5VUJ9 269 aa8.73□□□□□ -1.01
LINC01043-201ENST00000565936 POGKQ9P215 609 aa8.73□□□□□ -1.01
LINC01043-201ENST00000565936 ZBTB7CA1YPR0 619 aa8.72□□□□□ -1.01
LINC01043-201ENST00000565936 TDRD9Q8NDG6 1382 aaKnown RBP8.72□□□□□ -1.01
LINC01043-201ENST00000565936 RGL3Q3MIN7 710 aa8.72□□□□□ -1.01
LINC01043-201ENST00000565936 SMARCA4P51532 1647 aa8.72□□□□□ -1.01
LINC01043-201ENST00000565936 BCL11AQ9H165 835 aa8.72□□□□□ -1.01
LINC01043-201ENST00000565936 FANCD2Q9BXW9 1451 aa8.69□□□□□ -1.02
LINC01043-201ENST00000565936 OSCARQ8IYS5 282 aa8.69□□□□□ -1.02
LINC01043-201ENST00000565936 DDX10Q13206 875 aaKnown RBP8.68□□□□□ -1.02
LINC01043-201ENST00000565936 RSPH4AQ5TD94 716 aa8.68□□□□□ -1.02
LINC01043-201ENST00000565936 MLECQ14165 292 aa8.68□□□□□ -1.02
LINC01043-201ENST00000565936 WIZO95785 1651 aa8.68□□□□□ -1.02
LINC01043-201ENST00000565936 KNSTRNQ9Y448 316 aa8.67□□□□□ -1.02
LINC01043-201ENST00000565936 FAM9BQ8IZU0 186 aa8.67□□□□□ -1.02
LINC01043-201ENST00000565936 ARHGAP35Q9NRY4 1499 aa8.67□□□□□ -1.02
LINC01043-201ENST00000565936 MYH16Q9H6N6 1097 aa8.67□□□□□ -1.02
LINC01043-201ENST00000565936 RAPGEF2Q9Y4G8 1499 aa8.67□□□□□ -1.02
LINC01043-201ENST00000565936 UPF2Q9HAU5 1272 aaKnown RBP8.67□□□□□ -1.02
LINC01043-201ENST00000565936 CARD11Q9BXL7 1154 aa8.66□□□□□ -1.02
LINC01043-201ENST00000565936 HNRNPUQ00839 825 aaKnown RBP eCLIP8.65□□□□□ -1.02
LINC01043-201ENST00000565936 JPH4Q96JJ6 628 aa8.65□□□□□ -1.02
LINC01043-201ENST00000565936 NUDCQ9Y266 331 aa8.65□□□□□ -1.02
LINC01043-201ENST00000565936 PNNQ9H307 717 aaKnown RBP8.65□□□□□ -1.02
LINC01043-201ENST00000565936 MRS2Q9HD23 443 aa8.65□□□□□ -1.03
LINC01043-201ENST00000565936 GGT6Q6P531 493 aa8.64□□□□□ -1.03
LINC01043-201ENST00000565936 LMOD2Q6P5Q4 547 aa8.64□□□□□ -1.03
LINC01043-201ENST00000565936 SENP3Q9H4L4 574 aaPredicted RBP8.64□□□□□ -1.03
LINC01043-201ENST00000565936 PLEKHG5O94827 1062 aa8.64□□□□□ -1.03
LINC01043-201ENST00000565936 ANKRD30AQ9BXX3 1397 aa8.63□□□□□ -1.03
LINC01043-201ENST00000565936 CCDC18Q5T9S5 1454 aa8.62□□□□□ -1.03
LINC01043-201ENST00000565936 EID1Q9Y6B2 187 aa8.62□□□□□ -1.03
LINC01043-201ENST00000565936 VPS8Q8N3P4 1428 aa8.61□□□□□ -1.03
LINC01043-201ENST00000565936 ANP32AP39687 249 aaKnown RBP8.61□□□□□ -1.03
LINC01043-201ENST00000565936 NCAPD3P42695 1498 aa8.61□□□□□ -1.03
LINC01043-201ENST00000565936 MAPK8IP3Q9UPT6 1336 aa8.6□□□□□ -1.03
LINC01043-201ENST00000565936 TMF1P82094 1093 aa8.6□□□□□ -1.03
LINC01043-201ENST00000565936 TIMELESSQ9UNS1 1208 aa8.6□□□□□ -1.03
LINC01043-201ENST00000565936 HSP90AA1P07900 732 aaKnown RBP8.6□□□□□ -1.03
LINC01043-201ENST00000565936 SALL2Q9Y467 1007 aaPredicted RBP8.6□□□□□ -1.03
LINC01043-201ENST00000565936 PTPRGP23470 1445 aa8.6□□□□□ -1.03
LINC01043-201ENST00000565936 SPAG9O60271 1321 aaKnown RBP8.59□□□□□ -1.03
LINC01043-201ENST00000565936 PPM1GO15355 546 aaPredicted RBP8.59□□□□□ -1.03
LINC01043-201ENST00000565936 EIF5BO60841 1220 aaKnown RBP8.58□□□□□ -1.04
LINC01043-201ENST00000565936 SRPK2P78362 688 aaKnown RBP8.57□□□□□ -1.04
LINC01043-201ENST00000565936 CYB5RLQ6IPT4 315 aa8.57□□□□□ -1.04
LINC01043-201ENST00000565936 DCAF11Q8TEB1 546 aa8.57□□□□□ -1.04
LINC01043-201ENST00000565936 CHMP4BQ9H444 224 aaKnown RBP8.56□□□□□ -1.04
LINC01043-201ENST00000565936 GAPVD1Q14C86 1478 aa8.56□□□□□ -1.04
LINC01043-201ENST00000565936 NPHP1O15259 732 aa8.56□□□□□ -1.04
LINC01043-201ENST00000565936 HDGFL2Q7Z4V5 671 aaPredicted RBP8.56□□□□□ -1.04
LINC01043-201ENST00000565936 ARXQ96QS3 562 aa8.56□□□□□ -1.04
LINC01043-201ENST00000565936 KIF3BO15066 747 aa8.56□□□□□ -1.04
LINC01043-201ENST00000565936 SETD5Q9C0A6 1442 aa8.55□□□□□ -1.04
LINC01043-201ENST00000565936 WASHC2CQ9Y4E1 1318 aa8.55□□□□□ -1.04
LINC01043-201ENST00000565936 GTF3C3Q9Y5Q9 886 aa8.54□□□□□ -1.04
LINC01043-201ENST00000565936 EIF3AQ14152 1382 aaKnown RBP8.54□□□□□ -1.04
LINC01043-201ENST00000565936 PKD2Q13563 968 aa8.54□□□□□ -1.04
LINC01043-201ENST00000565936 NUP155O75694 1391 aa8.53□□□□□ -1.04
LINC01043-201ENST00000565936 CCDC136Q96JN2 1154 aa8.53□□□□□ -1.04
LINC01043-201ENST00000565936 MS4A1P11836 297 aa8.53□□□□□ -1.04
LINC01043-201ENST00000565936 AEBP2Q6ZN18 517 aaPredicted RBP8.53□□□□□ -1.04
LINC01043-201ENST00000565936 ANP32BQ92688 251 aaKnown RBP8.52□□□□□ -1.05
LINC01043-201ENST00000565936 FGD5Q6ZNL6 1462 aa8.52□□□□□ -1.05
LINC01043-201ENST00000565936 CHMP4AQ9BY43 222 aa8.52□□□□□ -1.05
LINC01043-201ENST00000565936 FHOD3Q2V2M9 1422 aa8.52□□□□□ -1.05
LINC01043-201ENST00000565936 HNRNPMP52272 730 aaKnown RBP eCLIP8.51□□□□□ -1.05
LINC01043-201ENST00000565936 MRC2Q9UBG0 1479 aa8.51□□□□□ -1.05
LINC01043-201ENST00000565936 UACAQ9BZF9 1416 aa8.51□□□□□ -1.05
LINC01043-201ENST00000565936 FKBP8Q14318 412 aa8.5□□□□□ -1.05
LINC01043-201ENST00000565936 HIRIP3Q9BW71 556 aaPredicted RBP8.5□□□□□ -1.05
LINC01043-201ENST00000565936 STK26Q9P289 416 aa8.5□□□□□ -1.05
LINC01043-201ENST00000565936 FTSJ3Q8IY81 847 aaKnown RBP8.49□□□□□ -1.05
LINC01043-201ENST00000565936 GRIN2BQ13224 1484 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms