RNA–Protein interactions for RNA: ENST00000565421.1

AC007342.3-202, humanhuman

TSL 1 (best)

Gene AC007342.3, Length 3,792 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007342.3-202ENST00000565421 POLR3GLQ9BT43 218 aa9.7□□□□□ -0.86
AC007342.3-202ENST00000565421 SALL2Q9Y467 1007 aaPredicted RBP9.7□□□□□ -0.86
AC007342.3-202ENST00000565421 AEBP2Q6ZN18 517 aaPredicted RBP9.69□□□□□ -0.86
AC007342.3-202ENST00000565421 CADPSQ9ULU8 1353 aa9.69□□□□□ -0.86
AC007342.3-202ENST00000565421 DHX37Q8IY37 1157 aaKnown RBP9.68□□□□□ -0.86
AC007342.3-202ENST00000565421 SYNJ1O43426 1573 aa9.67□□□□□ -0.86
AC007342.3-202ENST00000565421 BIVM-ERCC5R4GMW8 1640 aa9.67□□□□□ -0.86
AC007342.3-202ENST00000565421 TOP2BQ02880 1626 aa9.66□□□□□ -0.86
AC007342.3-202ENST00000565421 NAP1L5Q96NT1 182 aaPredicted RBP9.65□□□□□ -0.86
AC007342.3-202ENST00000565421 EEA1Q15075 1411 aa9.63□□□□□ -0.87
AC007342.3-202ENST00000565421 YTHDC1Q96MU7 727 aaKnown RBP9.63□□□□□ -0.87
AC007342.3-202ENST00000565421 PCGF6Q9BYE7 350 aa9.63□□□□□ -0.87
AC007342.3-202ENST00000565421 LAMC3Q9Y6N6 1575 aa9.62□□□□□ -0.87
AC007342.3-202ENST00000565421 HSP90B1P14625 803 aaKnown RBP9.61□□□□□ -0.87
AC007342.3-202ENST00000565421 CUX1P39880 1505 aa9.6□□□□□ -0.87
AC007342.3-202ENST00000565421 DEKP35659 375 aaKnown RBP9.6□□□□□ -0.87
AC007342.3-202ENST00000565421 LOC105371045A0A1W2PR82 267 aa9.59□□□□□ -0.87
AC007342.3-202ENST00000565421 SOGA1O94964 1423 aa9.58□□□□□ -0.88
AC007342.3-202ENST00000565421 HMGB1P09429 215 aaKnown RBP9.57□□□□□ -0.88
AC007342.3-202ENST00000565421 FANCD2Q9BXW9 1451 aa9.56□□□□□ -0.88
AC007342.3-202ENST00000565421 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.55□□□□□ -0.88
AC007342.3-202ENST00000565421 RUSC2Q8N2Y8 1516 aa9.54□□□□□ -0.88
AC007342.3-202ENST00000565421 AAMPQ13685 434 aa9.54□□□□□ -0.88
AC007342.3-202ENST00000565421 NESP48681 1621 aa9.54□□□□□ -0.88
AC007342.3-202ENST00000565421 PAXIP1Q6ZW49 1069 aaPredicted RBP9.53□□□□□ -0.88
AC007342.3-202ENST00000565421 DNAJC5BQ9UF47 199 aa9.53□□□□□ -0.88
AC007342.3-202ENST00000565421 RBM10P98175 930 aaKnown RBP9.52□□□□□ -0.89
AC007342.3-202ENST00000565421 TRIM26Q12899 539 aaPredicted RBP9.52□□□□□ -0.89
AC007342.3-202ENST00000565421 SAMD1Q6SPF0 538 aaPredicted RBP9.52□□□□□ -0.89
AC007342.3-202ENST00000565421 VSIG10Q8N0Z9 540 aa9.52□□□□□ -0.89
AC007342.3-202ENST00000565421 DNMBPQ6XZF7 1577 aa9.52□□□□□ -0.89
AC007342.3-202ENST00000565421 PDS5BQ9NTI5 1447 aa9.51□□□□□ -0.89
AC007342.3-202ENST00000565421 KIF21BO75037 1637 aa9.51□□□□□ -0.89
AC007342.3-202ENST00000565421 CNKSR2Q8WXI2 1034 aa9.51□□□□□ -0.89
AC007342.3-202ENST00000565421 CCER1Q8TC90 406 aaPredicted RBP9.5□□□□□ -0.89
AC007342.3-202ENST00000565421 ZMYND15Q9H091 742 aa9.5□□□□□ -0.89
AC007342.3-202ENST00000565421 BCCIPQ9P287 314 aaKnown RBP eCLIP9.5□□□□□ -0.89
AC007342.3-202ENST00000565421 CEP164Q9UPV0 1460 aa9.49□□□□□ -0.89
AC007342.3-202ENST00000565421 TOPBP1Q92547 1522 aa9.48□□□□□ -0.89
AC007342.3-202ENST00000565421 FGD5Q6ZNL6 1462 aa9.47□□□□□ -0.89
AC007342.3-202ENST00000565421 TMEM132AQ24JP5 1023 aa9.46□□□□□ -0.89
AC007342.3-202ENST00000565421 THOC2Q8NI27 1593 aaKnown RBP9.46□□□□□ -0.89
AC007342.3-202ENST00000565421 GOLGA3Q08378 1498 aa9.46□□□□□ -0.89
AC007342.3-202ENST00000565421 TNIKQ9UKE5 1360 aa9.46□□□□□ -0.89
AC007342.3-202ENST00000565421 KIF21AQ7Z4S6 1674 aa9.46□□□□□ -0.9
AC007342.3-202ENST00000565421 KIF27Q86VH2 1401 aa9.46□□□□□ -0.9
AC007342.3-202ENST00000565421 URB2Q14146 1524 aaKnown RBP9.45□□□□□ -0.9
AC007342.3-202ENST00000565421 PRXQ9BXM0 1461 aa9.44□□□□□ -0.9
AC007342.3-202ENST00000565421 RSPH4AQ5TD94 716 aa9.44□□□□□ -0.9
AC007342.3-202ENST00000565421 ERICH3Q5RHP9 1530 aa9.44□□□□□ -0.9
AC007342.3-202ENST00000565421 RSPH6AQ9H0K4 717 aa9.44□□□□□ -0.9
AC007342.3-202ENST00000565421 ABCA10Q8WWZ4 1543 aa9.43□□□□□ -0.9
AC007342.3-202ENST00000565421 POLA1P09884 1462 aaPredicted RBP9.43□□□□□ -0.9
AC007342.3-202ENST00000565421 CCDC9Q9Y3X0 531 aaKnown RBP9.43□□□□□ -0.9
AC007342.3-202ENST00000565421 RTL5Q5HYW3 569 aaPredicted RBP9.43□□□□□ -0.9
AC007342.3-202ENST00000565421 PLCB2Q00722 1185 aa9.41□□□□□ -0.9
AC007342.3-202ENST00000565421 CUX2O14529 1486 aa9.4□□□□□ -0.9
AC007342.3-202ENST00000565421 MRC2Q9UBG0 1479 aa9.39□□□□□ -0.91
AC007342.3-202ENST00000565421 RAPGEF2Q9Y4G8 1499 aa9.39□□□□□ -0.91
AC007342.3-202ENST00000565421 IGF1RP08069 1367 aa9.39□□□□□ -0.91
AC007342.3-202ENST00000565421 CEP162Q5TB80 1403 aa9.38□□□□□ -0.91
AC007342.3-202ENST00000565421 WDR62O43379 1518 aa9.37□□□□□ -0.91
AC007342.3-202ENST00000565421 RAD54L2Q9Y4B4 1467 aa9.37□□□□□ -0.91
AC007342.3-202ENST00000565421 TARBP1Q13395 1621 aaKnown RBP9.36□□□□□ -0.91
AC007342.3-202ENST00000565421 ABCA5Q8WWZ7 1642 aa9.36□□□□□ -0.91
AC007342.3-202ENST00000565421 NCLP19338 710 aaKnown RBP9.35□□□□□ -0.91
AC007342.3-202ENST00000565421 TSHZ2Q9NRE2 1034 aa9.35□□□□□ -0.91
AC007342.3-202ENST00000565421 IRX6P78412 446 aaPredicted RBP9.34□□□□□ -0.91
AC007342.3-202ENST00000565421 CUL7Q14999 1698 aa9.33□□□□□ -0.92
AC007342.3-202ENST00000565421 NAP1L2Q9ULW6 460 aaPredicted RBP9.33□□□□□ -0.92
AC007342.3-202ENST00000565421 UBTFP17480 764 aaKnown RBP9.33□□□□□ -0.92
AC007342.3-202ENST00000565421 CARMIL1Q5VZK9 1371 aa9.31□□□□□ -0.92
AC007342.3-202ENST00000565421 PTMSP20962 102 aa9.3□□□□□ -0.92
AC007342.3-202ENST00000565421 IFT140Q96RY7 1462 aa9.29□□□□□ -0.92
AC007342.3-202ENST00000565421 GAPVD1Q14C86 1478 aa9.29□□□□□ -0.92
AC007342.3-202ENST00000565421 CLIP1P30622 1438 aa9.29□□□□□ -0.92
AC007342.3-202ENST00000565421 CNGB1Q14028 1251 aaPredicted RBP9.29□□□□□ -0.92
AC007342.3-202ENST00000565421 ERCC6Q03468 1493 aa9.28□□□□□ -0.92
AC007342.3-202ENST00000565421 CFAP44Q96MT7 982 aa9.27□□□□□ -0.93
AC007342.3-202ENST00000565421 PBRM1Q86U86 1689 aa9.26□□□□□ -0.93
AC007342.3-202ENST00000565421 TDRD9Q8NDG6 1382 aaKnown RBP9.25□□□□□ -0.93
AC007342.3-202ENST00000565421 CANXP27824 592 aaKnown RBP9.25□□□□□ -0.93
AC007342.3-202ENST00000565421 VPS8Q8N3P4 1428 aa9.24□□□□□ -0.93
AC007342.3-202ENST00000565421 BBXQ8WY36 941 aaPredicted RBP9.23□□□□□ -0.93
AC007342.3-202ENST00000565421 ARAP1Q96P48 1450 aa9.23□□□□□ -0.93
AC007342.3-202ENST00000565421 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.22□□□□□ -0.93
AC007342.3-202ENST00000565421 GRIN2BQ13224 1484 aa9.22□□□□□ -0.93
AC007342.3-202ENST00000565421 IPO4Q8TEX9 1081 aaKnown RBP9.22□□□□□ -0.93
AC007342.3-202ENST00000565421 CTTNBP2Q8WZ74 1663 aa9.22□□□□□ -0.93
AC007342.3-202ENST00000565421 CLSTN1O94985 981 aa9.22□□□□□ -0.93
AC007342.3-202ENST00000565421 ADAMTS12P58397 1594 aa9.21□□□□□ -0.93
AC007342.3-202ENST00000565421 ARHGAP35Q9NRY4 1499 aa9.21□□□□□ -0.93
AC007342.3-202ENST00000565421 FHAD1B1AJZ9 1412 aa9.21□□□□□ -0.94
AC007342.3-202ENST00000565421 AQRO60306 1485 aaKnown RBP eCLIP9.21□□□□□ -0.94
AC007342.3-202ENST00000565421 DIEXFQ68CQ4 756 aaKnown RBP9.2□□□□□ -0.94
AC007342.3-202ENST00000565421 ZNF608Q9ULD9 1512 aaPredicted RBP9.2□□□□□ -0.94
AC007342.3-202ENST00000565421 LRRIQ1Q96JM4 1722 aa9.2□□□□□ -0.94
AC007342.3-202ENST00000565421 PSMD1Q99460 953 aa9.2□□□□□ -0.94
AC007342.3-202ENST00000565421 EIF4G3O43432 1585 aaKnown RBP9.19□□□□□ -0.94
AC007342.3-202ENST00000565421 CHMP4BQ9H444 224 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms