RNA–Protein interactions for RNA: ENST00000565401.1

AC009041.1-201, humanhuman

TSL 4 BASIC

Gene AC009041.1, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.1-201ENST00000565401 TSPOAP1O95153 1857 aa24.38■■□□□ 1.49
AC009041.1-201ENST00000565401 CUX1P39880 1505 aa24.33■■□□□ 1.49
AC009041.1-201ENST00000565401 PRG4Q92954 1404 aaPredicted RBP24.31■■□□□ 1.48
AC009041.1-201ENST00000565401 ABCA5Q8WWZ7 1642 aa24.26■■□□□ 1.47
AC009041.1-201ENST00000565401 SOCS7O14512 581 aa24.23■■□□□ 1.47
AC009041.1-201ENST00000565401 ABCA10Q8WWZ4 1543 aa24.2■■□□□ 1.47
AC009041.1-201ENST00000565401 ADAMTS12P58397 1594 aa24.2■■□□□ 1.46
AC009041.1-201ENST00000565401 JPH4Q96JJ6 628 aa24.19■■□□□ 1.46
AC009041.1-201ENST00000565401 ADCY10Q96PN6 1610 aa24.17■■□□□ 1.46
AC009041.1-201ENST00000565401 ILDR2Q71H61 639 aa24.15■■□□□ 1.46
AC009041.1-201ENST00000565401 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
AC009041.1-201ENST00000565401 COL17A1Q9UMD9 1497 aaPredicted RBP24.03■■□□□ 1.44
AC009041.1-201ENST00000565401 DISP3Q9P2K9 1392 aa24.02■■□□□ 1.44
AC009041.1-201ENST00000565401 PPRC1Q5VV67 1664 aaKnown RBP24■■□□□ 1.43
AC009041.1-201ENST00000565401 TOP2BQ02880 1626 aa23.95■■□□□ 1.43
AC009041.1-201ENST00000565401 GLI2P10070 1586 aa23.89■■□□□ 1.41
AC009041.1-201ENST00000565401 RUSC2Q8N2Y8 1516 aa23.88■■□□□ 1.41
AC009041.1-201ENST00000565401 WRNQ14191 1432 aaPredicted RBP eCLIP23.87■■□□□ 1.41
AC009041.1-201ENST00000565401 ASXL2Q76L83 1435 aa23.86■■□□□ 1.41
AC009041.1-201ENST00000565401 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
AC009041.1-201ENST00000565401 PLB1Q6P1J6 1458 aa23.83■■□□□ 1.41
AC009041.1-201ENST00000565401 TEX14Q8IWB6 1497 aa23.78■■□□□ 1.4
AC009041.1-201ENST00000565401 TTBK1Q5TCY1 1321 aaPredicted RBP23.78■■□□□ 1.4
AC009041.1-201ENST00000565401 ABCC2Q92887 1545 aa23.77■■□□□ 1.4
AC009041.1-201ENST00000565401 PTPRGP23470 1445 aa23.76■■□□□ 1.39
AC009041.1-201ENST00000565401 CERKQ8TCT0 537 aa23.71■■□□□ 1.39
AC009041.1-201ENST00000565401 MAP3K4Q9Y6R4 1608 aa23.7■■□□□ 1.39
AC009041.1-201ENST00000565401 EPRSP07814 1512 aaKnown RBP23.69■■□□□ 1.38
AC009041.1-201ENST00000565401 KIAA0586Q9BVV6 1533 aa23.65■■□□□ 1.38
AC009041.1-201ENST00000565401 PTPRMP28827 1452 aa23.65■■□□□ 1.38
AC009041.1-201ENST00000565401 CUL7Q14999 1698 aa23.63■■□□□ 1.37
AC009041.1-201ENST00000565401 PCF11O94913 1555 aaKnown RBP23.62■■□□□ 1.37
AC009041.1-201ENST00000565401 KIF21BO75037 1637 aa23.62■■□□□ 1.37
AC009041.1-201ENST00000565401 SPATA31D1Q6ZQQ2 1576 aa23.61■■□□□ 1.37
AC009041.1-201ENST00000565401 TNIKQ9UKE5 1360 aa23.56■■□□□ 1.36
AC009041.1-201ENST00000565401 UHRF1BP1LA0JNW5 1464 aa23.55■■□□□ 1.36
AC009041.1-201ENST00000565401 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
AC009041.1-201ENST00000565401 HSPA2P54652 639 aa23.5■■□□□ 1.35
AC009041.1-201ENST00000565401 ADAMTSL3P82987 1691 aa23.5■■□□□ 1.35
AC009041.1-201ENST00000565401 UACAQ9BZF9 1416 aa23.5■■□□□ 1.35
AC009041.1-201ENST00000565401 CARMIL2Q6F5E8 1435 aa23.48■■□□□ 1.35
AC009041.1-201ENST00000565401 KDM5BQ9UGL1 1544 aa23.46■■□□□ 1.35
AC009041.1-201ENST00000565401 CD109Q6YHK3 1445 aa23.42■■□□□ 1.34
AC009041.1-201ENST00000565401 MAGI3Q5TCQ9 1506 aa23.41■■□□□ 1.34
AC009041.1-201ENST00000565401 ZCCHC11Q5TAX3 1644 aaKnown RBP23.39■■□□□ 1.33
AC009041.1-201ENST00000565401 WDR7Q9Y4E6 1490 aa23.37■■□□□ 1.33
AC009041.1-201ENST00000565401 MADDQ8WXG6 1647 aa23.34■■□□□ 1.33
AC009041.1-201ENST00000565401 ARID4BQ4LE39 1312 aaPredicted RBP23.32■■□□□ 1.32
AC009041.1-201ENST00000565401 KCNH8Q96L42 1107 aa23.31■■□□□ 1.32
AC009041.1-201ENST00000565401 IGF1RP08069 1367 aa23.29■■□□□ 1.32
AC009041.1-201ENST00000565401 CFAP43Q8NDM7 1665 aa23.29■■□□□ 1.32
AC009041.1-201ENST00000565401 BCORL1Q5H9F3 1711 aa23.29■■□□□ 1.32
AC009041.1-201ENST00000565401 PLPPR3Q6T4P5 718 aa23.28■■□□□ 1.32
AC009041.1-201ENST00000565401 ARAP3Q8WWN8 1544 aa23.27■■□□□ 1.32
AC009041.1-201ENST00000565401 DISP1Q96F81 1524 aa23.23■■□□□ 1.31
AC009041.1-201ENST00000565401 RIMS1Q86UR5 1692 aaKnown RBP23.22■■□□□ 1.31
AC009041.1-201ENST00000565401 IQGAP2Q13576 1575 aa23.2■■□□□ 1.3
AC009041.1-201ENST00000565401 RAPGEF3O95398 923 aa23.18■■□□□ 1.3
AC009041.1-201ENST00000565401 DMRT2Q9Y5R5 561 aa23.1■■□□□ 1.29
AC009041.1-201ENST00000565401 CARMIL1Q5VZK9 1371 aa23.1■■□□□ 1.29
AC009041.1-201ENST00000565401 KIF27Q86VH2 1401 aa23.09■■□□□ 1.29
AC009041.1-201ENST00000565401 PHLDB1Q86UU1 1377 aa23.07■■□□□ 1.28
AC009041.1-201ENST00000565401 YEATS2Q9ULM3 1422 aa23.06■■□□□ 1.28
AC009041.1-201ENST00000565401 KIAA0556O60303 1618 aa23■■□□□ 1.27
AC009041.1-201ENST00000565401 UGGT2Q9NYU1 1516 aa23■■□□□ 1.27
AC009041.1-201ENST00000565401 FRMPD1Q5SYB0 1578 aa22.97■■□□□ 1.27
AC009041.1-201ENST00000565401 POGZQ7Z3K3 1410 aa22.96■■□□□ 1.27
AC009041.1-201ENST00000565401 STRCQ7RTU9 1775 aa22.96■■□□□ 1.27
AC009041.1-201ENST00000565401 ARHGEF40Q8TER5 1519 aa22.93■■□□□ 1.26
AC009041.1-201ENST00000565401 NEO1Q92859 1461 aa22.92■■□□□ 1.26
AC009041.1-201ENST00000565401 MLECQ14165 292 aa22.92■■□□□ 1.26
AC009041.1-201ENST00000565401 FANCAO15360 1455 aa22.9■■□□□ 1.26
AC009041.1-201ENST00000565401 IQSEC2Q5JU85 1478 aa22.9■■□□□ 1.26
AC009041.1-201ENST00000565401 PREX1Q8TCU6 1659 aa22.89■■□□□ 1.25
AC009041.1-201ENST00000565401 ABCA8O94911 1581 aa22.89■■□□□ 1.25
AC009041.1-201ENST00000565401 LTBP4Q8N2S1 1624 aa22.88■■□□□ 1.25
AC009041.1-201ENST00000565401 PTPRTO14522 1441 aa22.87■■□□□ 1.25
AC009041.1-201ENST00000565401 TTC37Q6PGP7 1564 aa22.86■■□□□ 1.25
AC009041.1-201ENST00000565401 ARID3CA6NKF2 412 aa22.86■■□□□ 1.25
AC009041.1-201ENST00000565401 ABCA9Q8IUA7 1624 aa22.86■■□□□ 1.25
AC009041.1-201ENST00000565401 FER1L4A9Z1Z3 1794 aa22.84■■□□□ 1.25
AC009041.1-201ENST00000565401 AKNAQ7Z591 1439 aa22.83■■□□□ 1.25
AC009041.1-201ENST00000565401 UBAP1LF5GYI3 381 aa22.83■■□□□ 1.25
AC009041.1-201ENST00000565401 CEBPAP49715 358 aaPredicted RBP22.83■■□□□ 1.25
AC009041.1-201ENST00000565401 SIGLEC1Q9BZZ2 1709 aa22.79■■□□□ 1.24
AC009041.1-201ENST00000565401 MED1Q15648 1581 aaPredicted RBP22.79■■□□□ 1.24
AC009041.1-201ENST00000565401 DENND4BO75064 1496 aaPredicted RBP22.79■■□□□ 1.24
AC009041.1-201ENST00000565401 UHRF1BP1Q6BDS2 1440 aa22.78■■□□□ 1.24
AC009041.1-201ENST00000565401 SUPT5HO00267 1087 aaKnown RBP22.75■■□□□ 1.23
AC009041.1-201ENST00000565401 RICTORQ6R327 1708 aa22.74■■□□□ 1.23
AC009041.1-201ENST00000565401 FHOD3Q2V2M9 1422 aa22.74■■□□□ 1.23
AC009041.1-201ENST00000565401 ATP10BO94823 1461 aa22.73■■□□□ 1.23
AC009041.1-201ENST00000565401 ZFYVE16Q7Z3T8 1539 aa22.72■■□□□ 1.23
AC009041.1-201ENST00000565401 GOLGA3Q08378 1498 aa22.71■■□□□ 1.23
AC009041.1-201ENST00000565401 PHF23Q9BUL5 403 aaPredicted RBP22.7■■□□□ 1.22
AC009041.1-201ENST00000565401 RAPGEF2Q9Y4G8 1499 aa22.7■■□□□ 1.22
AC009041.1-201ENST00000565401 ARHGEF12Q9NZN5 1544 aa22.68■■□□□ 1.22
AC009041.1-201ENST00000565401 EFCAB5A4FU69 1503 aa22.67■■□□□ 1.22
AC009041.1-201ENST00000565401 SETD1BQ9UPS6 1966 aaKnown RBP22.67■■□□□ 1.22
AC009041.1-201ENST00000565401 HSPA1LP34931 641 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms